Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 2.7e-95 352.1 189 100.0
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 6.4e-44 181.4 192 56.8
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 2.4e-43 179.5 181 57.5
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 3.5e-42 175.6 189 57.7
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 7.8e-42 174.5 189 56.6
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 6.6e-41 171.4 175 58.9
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 1.5e-40 170.2 189 56.6
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 1.9e-40 169.9 181 56.9
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 1.9e-40 169.9 189 56.6
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 4.3e-40 168.7 181 56.4
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 1.2e-39 167.2 191 55.0
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 1.2e-39 167.2 182 54.4
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.8e-39 166.0 189 55.6
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 6.2e-39 164.9 189 55.0
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 8.1e-39 164.5 181 55.2
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 2.4e-38 162.9 189 55.6
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 4.0e-38 162.2 169 53.3
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 5.3e-38 161.8 162 58.6
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 6.9e-38 161.4 189 54.0
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 6.9e-38 161.4 161 59.0
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 1.5e-37 160.2 172 56.4
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 2.6e-37 159.5 191 53.4
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 3.4e-37 159.1 188 52.7
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 5.8e-37 158.3 187 52.9
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 7.6e-37 157.9 172 55.8
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 9.9e-37 157.5 189 51.3
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 3.8e-36 155.6 155 56.8
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 4.9e-36 155.2 189 52.4
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 6.4e-36 154.8 189 51.9
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 1.9e-35 153.3 175 50.9
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 2.4e-35 152.9 169 57.4
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 4.2e-35 152.1 184 52.2
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 5.4e-35 151.8 153 56.2
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 1.2e-34 150.6 186 50.0
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 2.7e-34 149.4 186 50.0
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 4.6e-34 148.7 173 53.2
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 4.6e-34 148.7 168 51.8
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 7.8e-34 147.9 152 55.3
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 1.3e-33 147.1 187 51.3
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 2.3e-33 146.4 183 49.2
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 2.3e-33 146.4 187 48.1
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 3.0e-33 146.0 159 56.0
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 3.9e-33 145.6 157 56.7
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 8.7e-33 144.4 181 51.4
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 1.9e-32 143.3 156 55.8
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 1.9e-32 143.3 186 46.2
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 2.5e-32 142.9 156 53.2
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 7.3e-32 141.4 194 51.0
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 7.3e-32 141.4 171 51.5
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 9.6e-32 141.0 171 52.0
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 1.6e-31 140.2 195 51.3
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 2.8e-31 139.4 163 51.5
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 2.8e-31 139.4 182 48.9
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 2.8e-31 139.4 205 48.8
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 6.2e-31 138.3 164 50.0
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 6.2e-31 138.3 192 45.8
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 8.1e-31 137.9 191 49.7
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 8.1e-31 137.9 196 49.5
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 8.1e-31 137.9 196 49.5
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 1.1e-30 137.5 166 50.6
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 1.4e-30 137.1 132 56.8
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 1.8e-30 136.7 181 50.3
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 1.8e-30 136.7 116 63.8
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 3.1e-30 136.0 156 51.9
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 3.1e-30 136.0 197 45.7
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 2.0e-29 133.3 155 49.7
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 2.6e-29 132.9 214 43.5
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 7.6e-29 131.3 177 47.5
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 9.9e-29 131.0 177 46.9
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 2.2e-28 129.8 119 58.8
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 2.9e-28 129.4 183 46.4
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 4.9e-28 128.6 108 62.0
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 1.1e-27 127.5 120 59.2
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 1.1e-27 127.5 191 45.5
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 1.4e-27 127.1 165 44.8
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 2.4e-27 126.3 183 47.5
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 1.8e-25 120.2 119 54.6
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 3.0e-25 119.4 182 45.1
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 5.1e-25 118.6 228 40.4
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 1.5e-24 117.1 154 47.4
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 2.5e-24 116.3 191 44.0
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 3.3e-24 115.9 144 45.1
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 7.4e-24 114.8 108 56.5
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 9.6e-24 114.4 117 52.1
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 1.3e-23 114.0 126 50.0
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 6.2e-23 111.7 151 43.7
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 1.8e-22 110.2 139 51.1
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 5.5e-19 98.6 185 38.4
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 5.6e-16 88.6 99 50.5
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 6.2e-15 85.1 73 63.0
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 1.2e-13 80.9 58 69.0
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 4.2e-11 72.4 102 42.2
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 6.7e-09 65.1 156 35.3
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 1.5e-08 63.9 59 55.9
THA.LOC104804650 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 5.3e-06 55.5 86 41.9
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 6.9e-06 55.1 121 36.4


User provided reference genes

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