Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G992.5 Capsicum annuum HOM05D006847 ORTHO05D008685 3.4e-77 291.6 145 100.0
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 3.8e-28 128.6 210 44.3
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 8.4e-28 127.5 210 42.9
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 7.1e-27 124.4 210 41.0
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 7.1e-27 124.4 210 41.4
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 2.7e-26 122.5 209 42.1
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 3.3e-24 115.5 208 40.9
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 4.3e-24 115.2 208 39.9
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 7.4e-24 114.4 210 39.0
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 3.2e-19 99.0 185 38.9
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 5.5e-19 98.2 183 37.7
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.2e-18 97.1 193 38.3
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.2e-18 97.1 202 38.1
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 2.1e-18 96.3 194 35.1
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 2.1e-18 96.3 215 34.9
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 3.5e-18 95.5 180 37.8
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 4.6e-18 95.1 210 34.8
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 6.0e-18 94.7 202 36.1
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.3e-17 93.6 177 37.3
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 1.8e-17 93.2 209 34.0
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 1.8e-17 93.2 209 35.4
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 2.3e-17 92.8 211 36.5
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 6.7e-17 91.3 205 33.7
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 6.7e-17 91.3 210 34.8
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 8.7e-17 90.9 194 34.0
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 8.7e-17 90.9 212 33.5
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 1.5e-16 90.1 209 34.0
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.5e-16 90.1 167 39.5
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 1.9e-16 89.7 196 34.2
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 1.9e-16 89.7 214 35.5
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 1.9e-16 89.7 193 35.8
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 1.9e-16 89.7 212 33.5
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 2.5e-16 89.4 56 73.2
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 2.5e-16 89.4 213 34.7
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 4.3e-16 88.6 211 33.6
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 4.3e-16 88.6 181 35.4
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 5.7e-16 88.2 183 35.0
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 7.4e-16 87.8 55 76.4
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 7.4e-16 87.8 212 33.0
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 9.7e-16 87.4 212 33.0
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 1.6e-15 86.7 96 50.0
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.6e-15 86.7 207 34.8
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 2.2e-15 86.3 208 34.1
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 3.7e-15 85.5 210 33.8
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 3.7e-15 85.5 180 34.4
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 4.8e-15 85.1 208 33.2
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 4.8e-15 85.1 210 34.8
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 4.8e-15 85.1 55 74.5
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 8.2e-15 84.3 182 34.6
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 8.2e-15 84.3 55 74.5
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 1.1e-14 84.0 209 33.5
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 1.1e-14 84.0 210 32.9
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.4e-14 83.6 55 72.7
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 1.4e-14 83.6 180 35.0
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.4e-14 83.6 187 36.9
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 1.8e-14 83.2 208 32.2
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 2.4e-14 82.8 206 33.5
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.4e-14 82.8 183 35.0
CSS0031083 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 3.1e-14 82.4 55 70.9
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 5.3e-14 81.6 208 31.7
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 9.0e-14 80.9 50 76.0
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 9.0e-14 80.9 181 34.8
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 1.2e-13 80.5 55 69.1
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 1.5e-13 80.1 55 70.9
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 1.5e-13 80.1 205 31.2
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 2.6e-13 79.3 181 33.7
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 2.6e-13 79.3 55 69.1
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 4.5e-13 78.6 123 39.0
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 5.9e-13 78.2 196 31.1
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 1.7e-12 76.6 52 69.2
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 1.7e-12 76.6 55 67.3
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 1.7e-12 76.6 55 70.9
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 2.2e-12 76.3 63 60.3
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 2.2e-12 76.3 196 30.6
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 2.9e-12 75.9 115 46.1
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 3.8e-12 75.5 95 48.4
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 1.4e-11 73.6 63 60.3
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 4.2e-11 72.0 132 34.1
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 1.6e-10 70.1 55 56.4
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 1.6e-10 70.1 55 61.8
Sabra10G0104800 Salix brachista HOM05D006847 ORTHO05D008685 1.1e-08 63.9 48 62.5
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.3e-08 62.4 140 31.4
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 4.3e-08 62.0 134 31.3
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.1e-06 57.4 163 28.2


User provided reference genes

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