Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G899.26 Capsicum annuum HOM05D005846 ORTHO05D007369 7.6e-181 638.3 749 100.0
Sopen01g036400 Solanum pennellii HOM05D005846 ORTHO05D007369 6.6e-108 396.0 345 76.8
Solyc01g090670.3 Solanum lycopersicum HOM05D005846 ORTHO05D007369 9.5e-107 392.1 274 88.7
Nitab4.5_0003110g0060 Nicotiana tabacum HOM05D005846 ORTHO05D007369 2.3e-100 370.9 210 93.8
SGA_v2.0_scaffold52G19202 Striga asiatica HOM05D005846 ORTHO05D007369 4.4e-96 356.7 266 83.8
Duzib116G0440 Durio zibethinus HOM05D005846 ORTHO05D007369 1.1e-94 352.1 271 80.8
ECA236G0469 Erigeron canadensis HOM05D005846 ORTHO05D007369 4.1e-94 350.1 266 77.8
HanXRQChr06g0168821 Helianthus annuus HOM05D005846 ORTHO05D007369 9.2e-94 349.0 268 80.2
QL04p035021 Quercus lobata HOM05D005846 ORTHO05D007369 9.2e-94 349.0 211 85.3
Migut.B01566 Erythranthe guttata HOM05D005846 ORTHO05D007369 3.5e-93 347.1 343 69.1
COL.COLO4_35176 Corchorus olitorius HOM05D005846 ORTHO05D007369 2.3e-92 344.4 213 84.5
Lj9C561G11 Lonicera japonica HOM05D005846 ORTHO05D007369 6.6e-92 342.8 215 83.3
Dinv44098 Davidia involucrata HOM05D005846 ORTHO05D007369 1.5e-91 341.7 263 81.4
Ciclev10019079m.g Citrus clementina HOM05D005846 ORTHO05D007369 7.3e-91 339.3 213 82.6
PGR004G1251 Punica granatum HOM05D005846 ORTHO05D007369 7.3e-91 339.3 211 83.4
TPR.G39153 Trifolium pratense HOM05D005846 ORTHO05D007369 7.3e-91 339.3 346 62.1
CiPaw.06G031700 Carya illinoinensis HOM05D005846 ORTHO05D007369 9.5e-91 339.0 212 82.5
CSS0006984 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 2.1e-90 337.8 213 83.6
Prupe.2G134200 Prunus persica HOM05D005846 ORTHO05D007369 2.1e-90 337.8 273 76.9
Peaxi162Scf00377g00722 Petunia axillaris HOM05D005846 ORTHO05D007369 2.8e-90 337.4 197 90.9
CANSAT21G1379 Cannabis sativa HOM05D005846 ORTHO05D007369 6.2e-90 336.3 375 64.3
MD07G1110700 Malus domestica HOM05D005846 ORTHO05D007369 6.2e-90 336.3 212 82.5
Medtr7g045280 Medicago truncatula HOM05D005846 ORTHO05D007369 6.2e-90 336.3 212 81.1
arahy.Tifrunner.gnm1.ann1.SA9NP4 Arachis hypogaea HOM05D005846 ORTHO05D007369 8.1e-90 335.9 213 79.8
Eucgr.D02512 Eucalyptus grandis HOM05D005846 ORTHO05D007369 8.1e-90 335.9 208 83.2
CSS0013945 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 1.4e-89 335.1 213 82.6
Lj1g0009878 Lotus japonicus HOM05D005846 ORTHO05D007369 1.4e-89 335.1 213 80.3
Thecc.01G387400 Theobroma cacao HOM05D005846 ORTHO05D007369 1.4e-89 335.1 278 71.2
Rhsim02G0216700 Rhododendron simsii HOM05D005846 ORTHO05D007369 1.8e-89 334.7 212 81.6
arahy.Tifrunner.gnm1.ann1.DPE9LE Arachis hypogaea HOM05D005846 ORTHO05D007369 2.3e-89 334.3 210 80.5
Gohir.D11G145600 Gossypium hirsutum HOM05D005846 ORTHO05D007369 2.3e-89 334.3 279 77.4
THA.LOC104802481 Tarenaya hassleriana HOM05D005846 ORTHO05D007369 2.3e-89 334.3 269 77.3
TWI14G0811 Tripterygium wilfordii HOM05D005846 ORTHO05D007369 3.1e-89 334.0 272 73.9
MSTRG.28219 Avicennia marina HOM05D005846 ORTHO05D007369 4.0e-89 333.6 210 82.4
Cc02_g24740 Coffea canephora HOM05D005846 ORTHO05D007369 4.0e-89 333.6 212 82.1
Hund27391 Selenicereus undatus HOM05D005846 ORTHO05D007369 4.0e-89 333.6 211 81.5
vmacro13469 Vaccinium macrocarpon HOM05D005846 ORTHO05D007369 4.0e-89 333.6 211 82.5
VMungo1383G2837 Vigna mungo HOM05D005846 ORTHO05D007369 4.0e-89 333.6 211 80.1
RcHm_v2.0_Chr1g0348261 Rosa chinensis HOM05D005846 ORTHO05D007369 5.2e-89 333.2 211 81.0
Lsat_1_v5_gn_7_11161 Lactuca sativa HOM05D005846 ORTHO05D007369 8.9e-89 332.4 219 79.5
Haze_02742 Corylus avellana HOM05D005846 ORTHO05D007369 1.2e-88 332.0 219 80.4
Gohir.A11G139400 Gossypium hirsutum HOM05D005846 ORTHO05D007369 1.2e-88 332.0 278 73.7
Manes.05G051500 Manihot esculenta HOM05D005846 ORTHO05D007369 1.2e-88 332.0 206 84.0
Sp4g27070 Schrenkiella parvula HOM05D005846 ORTHO05D007369 1.2e-88 332.0 212 81.1
CsaV3_6G009050 Cucumis sativus L. HOM05D005846 ORTHO05D007369 2.0e-88 331.3 213 81.7
DCAR_031886 Daucus carota HOM05D005846 ORTHO05D007369 3.4e-88 330.5 213 80.8
Thhalv10001339m.g Eutrema salsugineum HOM05D005846 ORTHO05D007369 9.8e-88 328.9 270 67.8
FAN10G4209 Fragaria x ananassa HOM05D005846 ORTHO05D007369 9.8e-88 328.9 211 78.7
AL4G44100 Arabidopsis lyrata HOM05D005846 ORTHO05D007369 1.7e-87 328.2 212 80.7
GSVIVG01018216001 Vitis vinifera HOM05D005846 ORTHO05D007369 1.7e-87 328.2 213 78.9
Atru.chr5.196 Acer truncatum HOM05D005846 ORTHO05D007369 2.2e-87 327.8 209 80.9
FAN03G1473 Fragaria x ananassa HOM05D005846 ORTHO05D007369 2.9e-87 327.4 211 78.2
FAN06G0321 Fragaria x ananassa HOM05D005846 ORTHO05D007369 2.9e-87 327.4 211 78.2
Gorai.007G156100 Gossypium raimondii HOM05D005846 ORTHO05D007369 2.9e-87 327.4 286 75.5
CARHR140260 Cardamine hirsuta HOM05D005846 ORTHO05D007369 3.7e-87 327.0 212 80.7
FAN01G1706 Fragaria x ananassa HOM05D005846 ORTHO05D007369 3.7e-87 327.0 211 78.2
FAN10G1341 Fragaria x ananassa HOM05D005846 ORTHO05D007369 6.4e-87 326.2 211 78.2
Carub.0004s2760 Capsella rubella HOM05D005846 ORTHO05D007369 8.3e-87 325.9 212 80.2
Actinidia22778 Actinidia chinensis HOM05D005846 ORTHO05D007369 1.1e-86 325.5 270 74.8
Actinidia22833 Actinidia chinensis HOM05D005846 ORTHO05D007369 1.1e-86 325.5 270 74.8
Glyma.01G074700 Glycine max HOM05D005846 ORTHO05D007369 1.4e-86 325.1 213 78.4
Sabra14G0041600 Salix brachista HOM05D002053 ORTHO05D002135 1.4e-86 325.1 206 82.0
Cfa011122 Carpinus fangiana HOM05D005846 ORTHO05D007369 1.9e-86 324.7 354 68.1
FAN06G3163 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.4e-86 323.2 211 77.3
Aqoxy5G03824 Aquilegia oxysepala HOM05D005846 ORTHO05D007369 7.1e-86 322.8 212 78.3
A05p05100 Brassica napus HOM05D005846 ORTHO05D007369 1.2e-85 322.0 213 79.8
Sed0022623 Sechium edule HOM05D005846 ORTHO05D007369 1.2e-85 322.0 214 80.4
MBI05_g14240_MAGBIO Magnolia biondii HOM05D005846 ORTHO05D007369 1.6e-85 321.6 212 78.3
Psat3g158120 Pisum sativum HOM05D005846 ORTHO05D007369 2.7e-85 320.9 377 65.0
Potri.014G057000 Populus trichocarpa HOM05D005846 ORTHO05D007369 2.7e-85 320.9 356 66.9
Ah.05g173450 Amaranthus hybridus HOM05D005846 ORTHO05D007369 3.5e-85 320.5 206 80.6
Phvul.007G143350 Phaseolus vulgaris HOM05D005846 ORTHO05D007369 3.5e-85 320.5 369 62.1
BraA05t19484Z Brassica rapa HOM05D005846 ORTHO05D007369 4.6e-85 320.1 212 80.2
BcaC02g12270 Brassica carinata HOM05D005846 ORTHO05D007369 6.0e-85 319.7 213 79.3
Glyma.11G162365 Glycine max HOM05D005846 ORTHO05D007369 6.0e-85 319.7 210 78.6
Lalb_Chr19g0126671 Lupinus albus HOM05D005846 ORTHO05D007369 2.3e-84 317.8 215 77.2
C04p05950 Brassica napus HOM05D005846 ORTHO05D007369 5.1e-84 316.6 213 78.9
BolC4t22226H Brassica oleracea HOM05D005846 ORTHO05D007369 5.1e-84 316.6 213 78.9
AT2G45000 Arabidopsis thaliana HOM05D005846 ORTHO05D007369 2.8e-82 310.8 342 66.4
EL10Ac1g00809 Beta vulgaris HOM05D005846 ORTHO05D007369 4.7e-82 310.1 202 80.2
Ca_26287_v3 Cicer arietinum L. HOM05D005846 ORTHO05D007369 4.7e-82 310.1 363 59.5
Aa31LG1G26590 Aethionema arabicum HOM05D005846 ORTHO05D007369 1.8e-81 308.1 212 75.5
unitig_26.g8879 Utricularia gibba HOM05D005846 ORTHO05D007369 1.5e-80 305.1 379 59.9
MELO3C022237.2 Cucumis melo HOM05D005846 ORTHO05D007369 2.0e-80 304.7 251 68.1
PSO675G5996 Papaver somniferum HOM05D005846 ORTHO05D007369 4.4e-80 303.5 207 76.3
ClCG06G002930 Citrullus lanatus HOM05D005846 ORTHO05D007369 1.3e-79 302.0 195 81.0
PSO541G5798 Papaver somniferum HOM05D005846 ORTHO05D007369 1.7e-79 301.6 207 75.8
ATR0559G037 Amborella trichopoda HOM05D005846 ORTHO05D007369 8.4e-79 299.3 206 74.8
TAR375G0515 Trochodendron aralioides HOM05D005846 ORTHO05D007369 1.1e-78 298.9 255 72.5
Oeu061505.1 Olea europaea HOM05D005846 ORTHO05D007369 1.4e-78 298.5 182 84.6
CDE02G2440 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 2.3e-76 291.2 320 55.3
HanXRQChr04g0123471 Helianthus annuus HOM05D005846 ORTHO05D007369 5.1e-76 290.0 180 81.7
Nn6g33892 Nelumbo nucifera HOM05D005846 ORTHO05D007369 1.9e-75 288.1 194 76.8
CDE04G1707 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 2.5e-75 287.7 321 54.8
FvH4_7g10470 Fragaria vesca HOM05D005846 ORTHO05D007369 2.5e-75 287.7 181 80.7
Zm00001eb367060 Zea mays HOM05D005846 ORTHO05D007369 7.3e-75 286.2 213 69.5
HPP92_027757 Vanilla planifolia HOM05D005846 ORTHO05D007369 8.4e-71 272.7 192 72.4
Pp3c15_14630 Physcomitrium patens HOM05D005846 ORTHO05D007369 2.3e-68 264.6 195 68.7
Mapoly0005s0221 Marchantia polymorpha HOM05D005846 ORTHO05D007369 8.7e-68 262.7 195 68.2
Nitab4.5_0001823g0090 Nicotiana tabacum HOM05D005846 ORTHO05D007369 3.3e-67 260.8 225 69.3
AagrBONN_evm.TU.Sc2ySwM_117.1077 Anthoceros agrestis HOM05D005846 ORTHO05D007369 1.3e-66 258.8 330 49.1
arahy.Tifrunner.gnm1.ann1.2XVX2B Arachis hypogaea HOM05D005846 ORTHO05D007369 1.6e-66 258.5 224 63.8
AUR62004139 Chenopodium quinoa HOM05D005846 ORTHO05D007369 2.1e-66 258.1 196 70.9
AUR62013700 Chenopodium quinoa HOM05D005846 ORTHO05D007369 1.6e-61 241.9 186 71.0
PGR004G1857 Punica granatum HOM05D005846 ORTHO05D007369 1.0e-60 239.2 157 80.3
Sc02g0002920 Simmondsia chinensis HOM05D005846 ORTHO05D007369 5.1e-60 236.9 178 72.5
CBR_g21126 Chara braunii HOM05D005846 ORTHO05D007369 2.0e-56 224.9 184 64.7
HPP92_002750 Vanilla planifolia HOM05D005846 ORTHO05D007369 1.8e-44 185.3 149 65.8
Os01g0856600 Oryza sativa ssp. japonica HOM05D005846 ORTHO05D007369 2.2e-31 141.7 114 61.4
Atru.chr5.198 Acer truncatum HOM05D002424 ORTHO05D002640 5.5e-30 137.1 93 74.2
Cre16.g677700 Chlamydomonas reinhardtii HOM05D005846 ORTHO05D007369 6.7e-28 130.2 195 41.5
QL04p035108 Quercus lobata HOM05D005846 ORTHO05D007369 2.5e-27 128.3 77 83.1
arahy.Tifrunner.gnm1.ann1.V1AVP1 Arachis hypogaea HOM05D005846 ORTHO05D007369 1.7e-26 125.6 103 69.9
QL04p035237 Quercus lobata HOM05D005846 ORTHO05D007369 3.4e-24 117.9 75 80.0
PRCOL_00002612 Prasinoderma coloniale HOM05D005846 ORTHO05D007369 5.9e-24 117.1 212 35.4
Cpa.g.sc22.5 Carica papaya HOM05D005846 ORTHO05D007369 1.9e-22 112.1 90 70.0
Cpa.g.sc22.4 Carica papaya HOM05D005846 ORTHO05D007369 2.1e-21 108.6 107 57.9
QL05p084337 Quercus lobata HOM05D005846 ORTHO05D007369 1.5e-19 102.4 64 79.7
HPP92_006013 Vanilla planifolia HOM05D005846 ORTHO05D007369 2.2e-18 98.6 107 50.5
HanXRQChr16g0530801 Helianthus annuus HOM05D005846 ORTHO05D007369 4.8e-18 97.4 180 38.3
HanXRQChr12g0364311 Helianthus annuus HOM05D005846 ORTHO05D007369 2.4e-17 95.1 56 82.1
HPP92_002751 Vanilla planifolia HOM05D005846 ORTHO05D007369 1.6e-16 92.4 58 74.1
Lsat_1_v5_gn_4_126501 Lactuca sativa HOM05D005846 ORTHO05D007369 2.0e-16 92.0 63 73.0
HanXRQChr01g0009681 Helianthus annuus HOM05D005846 ORTHO05D007369 4.5e-16 90.9 168 37.5
Atru.chr5.201 Acer truncatum HOM05D005846 ORTHO05D007369 3.8e-15 87.8 62 67.7
MCO01G259 Micromonas commoda HOM05D005846 ORTHO05D007369 2.5e-14 85.1 145 35.2
MCO01G299 Micromonas commoda HOM05D005846 ORTHO05D007369 2.5e-14 85.1 145 35.2
C09p68450 Brassica napus HOM05D005846 ORTHO05D007369 7.2e-14 83.6 67 64.2
HanXRQChr02g0053971 Helianthus annuus HOM05D005846 ORTHO05D000176 3.6e-13 81.3 159 37.1
A05p20700 Brassica napus HOM05D005846 ORTHO05D007369 7.5e-11 73.6 127 52.0
HanXRQChr12g0366671 Helianthus annuus HOM05D005846 ORTHO05D007369 5.3e-09 67.4 39 84.6
SalBow5G1215 Salvia bowleyana HOM05D005846 ORTHO05D007369 2.7e-08 65.1 58 65.5
BolC9t59592H Brassica oleracea HOM05D022734 ORTHO05D024517 1.5e-06 59.3 52 63.5
Cfa023102 Carpinus fangiana HOM05D000298 ORTHO05D125655 2.5e-06 58.5 149 26.8


User provided reference genes

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