Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G84.32 Capsicum annuum HOM05D007288 ORTHO05D009200 1.3e-82 309.7 155 100.0
Solyc11g072610.3 Solanum lycopersicum HOM05D007288 ORTHO05D009200 4.3e-54 214.9 119 89.1
Sopen11g030260 Solanum pennellii HOM05D007288 ORTHO05D009200 4.3e-54 214.9 119 89.1
PGSC0003DMG401025391 Solanum tuberosum HOM05D007288 ORTHO05D009200 5.2e-52 208.0 119 86.6
Peaxi162Scf00616g00015 Petunia axillaris HOM05D007288 ORTHO05D009200 5.4e-49 198.0 118 83.9
Nitab4.5_0014946g0010 Nicotiana tabacum HOM05D007288 ORTHO05D009200 1.3e-45 186.8 128 76.6
COL.COLO4_18386 Corchorus olitorius HOM05D007288 ORTHO05D009200 4.0e-44 181.8 126 69.8
GSVIVG01025099001 Vitis vinifera HOM05D007288 ORTHO05D009200 4.4e-43 178.3 119 71.4
Prupe.6G090900 Prunus persica HOM05D007288 ORTHO05D009200 9.9e-43 177.2 119 72.3
Cfa011389 Carpinus fangiana HOM05D007288 ORTHO05D009200 1.7e-42 176.4 119 71.4
FAN21G3325 Fragaria x ananassa HOM05D007288 ORTHO05D009200 1.7e-42 176.4 119 73.1
Atru.chr3.3740 Acer truncatum HOM05D007288 ORTHO05D009200 2.2e-42 176.0 119 73.1
QL01p035799 Quercus lobata HOM05D007288 ORTHO05D009200 6.4e-42 174.5 119 72.3
Thecc.09G336000 Theobroma cacao HOM05D007288 ORTHO05D009200 6.4e-42 174.5 119 72.3
TAR623G1771 Trochodendron aralioides HOM05D007288 ORTHO05D009200 6.4e-42 174.5 120 69.2
Hma1.2p1_0861F.1_g229670 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 8.4e-42 174.1 119 68.9
Hma1.2p1_0861F.1_g229675 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 8.4e-42 174.1 119 68.9
Lj2A1042T48 Lonicera japonica HOM05D007288 ORTHO05D009200 1.4e-41 173.3 120 71.7
FAN16G0816 Fragaria x ananassa HOM05D007288 ORTHO05D009200 3.2e-41 172.2 119 73.1
RcHm_v2.0_Chr5g0061521 Rosa chinensis HOM05D007288 ORTHO05D009200 3.2e-41 172.2 119 71.4
Haze_23956 Corylus avellana HOM05D007288 ORTHO05D009200 4.2e-41 171.8 119 69.7
Dinv32816 Davidia involucrata HOM05D007288 ORTHO05D009200 4.2e-41 171.8 119 69.7
FvH4_3g33990 Fragaria vesca HOM05D007288 ORTHO05D009200 9.3e-41 170.6 119 70.6
FAN11G2413 Fragaria x ananassa HOM05D007288 ORTHO05D009200 9.3e-41 170.6 119 70.6
Manes.04G027100 Manihot esculenta HOM05D007288 ORTHO05D009200 9.3e-41 170.6 120 68.3
Oeu058505.2 Olea europaea HOM05D007288 ORTHO05D009200 1.2e-40 170.2 119 71.4
Nitab4.5_0004512g0010 Nicotiana tabacum HOM05D007288 ORTHO05D009200 4.6e-40 168.3 118 73.7
ClCG02G020790 Citrullus lanatus HOM05D007288 ORTHO05D009200 6.0e-40 167.9 119 68.1
MELO3C025727.2 Cucumis melo HOM05D007288 ORTHO05D009200 6.0e-40 167.9 139 60.4
PSO384G1093 Papaver somniferum HOM05D007288 ORTHO05D009200 7.8e-40 167.5 119 68.1
Actinidia00813 Actinidia chinensis HOM05D007288 ORTHO05D009200 1.0e-39 167.2 119 68.9
Sed0021724 Sechium edule HOM05D007288 ORTHO05D009200 1.0e-39 167.2 119 68.1
CSS0002437 Camellia sinensis var. sinensis HOM05D007288 ORTHO05D009200 1.7e-39 166.4 119 68.1
Lsat_1_v5_gn_5_164600 Lactuca sativa HOM05D007288 ORTHO05D009200 1.7e-39 166.4 119 69.7
MD11G1120900 Malus domestica HOM05D007288 ORTHO05D009200 1.7e-39 166.4 119 68.1
Thhalv10017710m.g Eutrema salsugineum HOM05D007288 ORTHO05D009200 3.0e-39 165.6 119 68.9
Psat5g276680 Pisum sativum HOM05D007288 ORTHO05D009200 5.1e-39 164.9 119 68.1
Cpa.g.sc139.41 Carica papaya HOM05D007288 ORTHO05D009200 6.6e-39 164.5 119 67.2
TPR.G11590 Trifolium pratense HOM05D007288 ORTHO05D009200 6.6e-39 164.5 119 68.9
AT2G28560 Arabidopsis thaliana HOM05D007288 ORTHO05D009200 8.7e-39 164.1 119 68.1
CiPaw.13G104600 Carya illinoinensis HOM05D007288 ORTHO05D009200 8.7e-39 164.1 119 64.7
CsaV3_6G021820 Cucumis sativus L. HOM05D007288 ORTHO05D009200 1.1e-38 163.7 119 65.5
Lalb_Chr14g0374871 Lupinus albus HOM05D007288 ORTHO05D009200 1.1e-38 163.7 119 69.7
BcaB06g28228 Brassica carinata HOM05D007288 ORTHO05D009200 1.5e-38 163.3 119 68.1
Gorai.001G105400 Gossypium raimondii HOM05D007288 ORTHO05D009200 1.5e-38 163.3 119 67.2
BcaC02g08159 Brassica carinata HOM05D007288 ORTHO05D009200 1.9e-38 162.9 115 70.4
C04p57770 Brassica napus HOM05D007288 ORTHO05D009200 1.9e-38 162.9 115 70.4
BolC4t27295H Brassica oleracea HOM05D007288 ORTHO05D009200 1.9e-38 162.9 115 70.4
Gohir.D07G098000 Gossypium hirsutum HOM05D007288 ORTHO05D009200 1.9e-38 162.9 119 66.4
PSO339G6024 Papaver somniferum HOM05D007288 ORTHO05D009200 1.9e-38 162.9 119 66.4
CARHR121570 Cardamine hirsuta HOM05D007288 ORTHO05D009200 2.5e-38 162.5 119 68.1
Nn2g10628 Nelumbo nucifera HOM05D007288 ORTHO05D009200 2.5e-38 162.5 119 67.2
Lj3g0012395 Lotus japonicus HOM05D007288 ORTHO05D009200 3.3e-38 162.2 119 68.1
Cc01_g11850 Coffea canephora HOM05D007288 ORTHO05D009200 4.3e-38 161.8 121 69.4
arahy.Tifrunner.gnm1.ann1.93BU3Z Arachis hypogaea HOM05D007288 ORTHO05D009200 5.6e-38 161.4 119 67.2
A04p21650 Brassica napus HOM05D007288 ORTHO05D009200 5.6e-38 161.4 115 69.6
BraA04t17729Z Brassica rapa HOM05D007288 ORTHO05D009200 5.6e-38 161.4 115 69.6
Carub.0004s0953 Capsella rubella HOM05D007288 ORTHO05D009200 9.6e-38 160.6 119 67.2
Medtr2g093050 Medicago truncatula HOM05D007288 ORTHO05D009200 1.3e-37 160.2 120 66.7
Sp4g11390 Schrenkiella parvula HOM05D007288 ORTHO05D009200 1.6e-37 159.8 117 69.2
arahy.Tifrunner.gnm1.ann1.A288I1 Arachis hypogaea HOM05D007288 ORTHO05D009200 2.1e-37 159.5 119 67.2
Gohir.A07G093400 Gossypium hirsutum HOM05D007288 ORTHO05D009200 2.1e-37 159.5 119 65.5
PGR102G2823 Punica granatum HOM05D007288 ORTHO05D009200 3.6e-37 158.7 119 67.2
MSTRG.12620 Avicennia marina HOM05D007288 ORTHO05D009200 4.8e-37 158.3 121 65.3
Ca_01448_v3 Cicer arietinum L. HOM05D007288 ORTHO05D009200 6.2e-37 157.9 126 65.1
HanXRQChr15g0493521 Helianthus annuus HOM05D007288 ORTHO05D009200 6.2e-37 157.9 119 68.1
Glyma.15G044300 Glycine max HOM05D007288 ORTHO05D009200 8.1e-37 157.5 124 64.5
TWI75G0177 Tripterygium wilfordii HOM05D007288 ORTHO05D009200 8.1e-37 157.5 119 65.5
THA.LOC104800033 Tarenaya hassleriana HOM05D007288 ORTHO05D009200 1.1e-36 157.1 119 64.7
THA.LOC104815758 Tarenaya hassleriana HOM05D007288 ORTHO05D009200 1.1e-36 157.1 119 64.7
ECA248G2408 Erigeron canadensis HOM05D007288 ORTHO05D009200 2.4e-36 156.0 119 66.4
Sc21g0000170 Simmondsia chinensis HOM05D007288 ORTHO05D009200 1.2e-35 153.7 119 63.0
Zm00001eb355220 Zea mays HOM05D007288 ORTHO05D009200 1.2e-35 153.7 119 64.7
Eucgr.B02451 Eucalyptus grandis HOM05D007288 ORTHO05D009200 2.0e-35 152.9 119 64.7
Aqoxy4G03169 Aquilegia oxysepala HOM05D007288 ORTHO05D009200 2.6e-35 152.5 119 68.1
Aqoxy7G02469 Aquilegia oxysepala HOM05D007288 ORTHO05D009200 9.9e-35 150.6 119 66.4
SGA_v2.0_scaffold146G36239 Striga asiatica HOM05D007288 ORTHO05D009200 1.3e-34 150.2 119 66.4
CANSAT54G2720 Cannabis sativa HOM05D007288 ORTHO05D009200 1.7e-34 149.8 119 65.5
HPP92_001033 Vanilla planifolia HOM05D007288 ORTHO05D009200 8.4e-34 147.5 119 61.3
Os05g0121700 Oryza sativa ssp. japonica HOM05D007288 ORTHO05D009200 1.4e-33 146.7 124 62.1
SalBow3G3212 Salvia bowleyana HOM05D007288 ORTHO05D009200 1.4e-33 146.7 119 62.2
ATR0594G195 Amborella trichopoda HOM05D007288 ORTHO05D009200 1.9e-33 146.4 121 58.7
AUR62025046 Chenopodium quinoa HOM05D007288 ORTHO05D009200 1.6e-32 143.3 126 58.7
Ciclev10028721m.g Citrus clementina HOM05D007288 ORTHO05D009200 3.0e-31 139.0 116 60.3
CDE04G2273 Ceratophyllum demersum HOM05D007288 ORTHO05D009200 3.9e-31 138.7 119 60.5
CSS0029402 Camellia sinensis var. sinensis HOM05D007288 ORTHO05D009200 6.7e-31 137.9 96 66.7
Hund08177 Selenicereus undatus HOM05D007288 ORTHO05D009200 5.6e-30 134.8 118 60.2
unitig_61.g26166 Utricularia gibba HOM05D007288 ORTHO05D009200 5.6e-30 134.8 119 57.1
SEGI_21779 Sequoiadendron giganteum HOM05D007288 ORTHO05D009200 1.4e-25 120.2 122 51.6
vmacro14486 Vaccinium macrocarpon HOM05D007288 ORTHO05D009200 7.4e-22 107.8 120 50.8
Nn4g25076 Nelumbo nucifera HOM05D000414 ORTHO05D009653 2.1e-16 89.7 119 44.5
VMungo1080G1892 Vigna mungo HOM05D007288 ORTHO05D009200 1.3e-15 87.0 71 63.4
Pp3c25_15290 Physcomitrium patens HOM05D007288 ORTHO05D009200 3.0e-15 85.9 121 40.5
AagrBONN_evm.TU.Sc2ySwM_368.1709 Anthoceros agrestis HOM05D007288 ORTHO05D009200 2.8e-13 79.3 96 44.8
Mapoly0007s0061 Marchantia polymorpha HOM05D007288 ORTHO05D009200 8.2e-13 77.8 119 38.7
Ah.01g002370 Amaranthus hybridus HOM05D007288 ORTHO05D009200 1.2e-11 73.9 78 55.1
CBR_g23396 Chara braunii HOM05D007288 ORTHO05D009200 1.5e-11 73.6 117 40.2
Aqoxy1G03071 Aquilegia oxysepala HOM05D005441 ORTHO05D006879 1.3e-10 70.5 44 75.0
PRCOL_00002179 Prasinoderma coloniale HOM05D007288 ORTHO05D009200 8.8e-07 57.8 68 41.2


User provided reference genes

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