Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G836.54 Capsicum annuum HOM05D005506 ORTHO05D004172 6.6e-60 233.8 114 100.0
CAN.G1235.4 Capsicum annuum HOM05D000638 ORTHO05D000801 4.4e-48 194.5 113 85.0
CAN.G695.1 Capsicum annuum HOM05D005506 ORTHO05D004172 6.0e-45 184.1 112 81.2
CAN.G170.72 Capsicum annuum HOM05D000327 ORTHO05D000218 1.9e-43 179.1 113 80.5
CAN.G1251.8 Capsicum annuum HOM05D005506 ORTHO05D004172 2.1e-42 175.6 113 77.0
CAN.G2548.1 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-41 173.3 113 76.1
CAN.G170.30 Capsicum annuum HOM05D011038 ORTHO05D004172 1.8e-41 172.6 113 77.9
CAN.G1612.5 Capsicum annuum HOM05D005506 ORTHO05D004172 4.4e-40 167.9 112 76.8
CAN.G806.9 Capsicum annuum HOM05D011038 ORTHO05D004172 4.1e-38 161.4 96 82.3
CAN.G1824.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.3e-36 156.4 110 72.7
CAN.G7.16 Capsicum annuum HOM05D005506 ORTHO05D004172 6.6e-36 154.1 113 68.1
CAN.G134.131 Capsicum annuum HOM05D005506 ORTHO05D004172 6.0e-29 131.0 82 80.5
CAN.G97.43 Capsicum annuum HOM05D005506 ORTHO05D004172 1.7e-28 129.4 85 75.3
CAN.G1056.16 Capsicum annuum HOM05D005506 ORTHO05D004172 3.9e-28 128.3 112 58.0
PGSC0003DMG400036799 Solanum tuberosum HOM05D005506 ORTHO05D004172 1.1e-27 126.7 114 56.1
CAN.G1177.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.5e-27 126.3 109 58.7
CAN.G513.5 Capsicum annuum HOM05D005506 ORTHO05D004172 1.9e-27 125.9 82 74.4
CAN.G700.37 Capsicum annuum HOM05D011038 ORTHO05D004172 1.2e-26 123.2 75 78.7
CAN.G1937.1 Capsicum annuum HOM05D005506 ORTHO05D004172 2.1e-26 122.5 112 51.8
CAN.G65.25 Capsicum annuum HOM05D005506 ORTHO05D004172 2.8e-26 122.1 106 56.6
CAN.G248.41 Capsicum annuum HOM05D005506 ORTHO05D004172 4.7e-26 121.3 78 75.6
CAN.G129.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-25 120.2 112 54.5
CAN.G801.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.4e-25 119.8 106 57.5
CAN.G22.18 Capsicum annuum HOM05D005506 ORTHO05D004172 3.1e-25 118.6 113 55.8
CAN.G126.52 Capsicum annuum HOM05D005506 ORTHO05D004172 4.0e-25 118.2 112 53.6
CAN.G66.2 Capsicum annuum HOM05D005506 ORTHO05D004172 9.9e-24 113.6 108 53.7
CAN.G243.35 Capsicum annuum HOM05D005506 ORTHO05D004172 1.3e-23 113.2 82 65.9
CAN.G513.3 Capsicum annuum HOM05D005506 ORTHO05D004172 1.3e-23 113.2 113 54.0
CAN.G755.2 Capsicum annuum HOM05D005506 ORTHO05D004172 2.2e-23 112.5 84 69.0
CAN.G1038.18 Capsicum annuum HOM05D005506 ORTHO05D004172 4.9e-23 111.3 109 51.4
CAN.G194.25 Capsicum annuum HOM05D005506 ORTHO05D004172 5.4e-22 107.8 113 53.1
CAN.G342.9 Capsicum annuum HOM05D005506 ORTHO05D004172 3.5e-21 105.1 107 55.1
CAN.G371.20 Capsicum annuum HOM05D005506 ORTHO05D004172 6.6e-20 100.9 111 49.5
CAN.G92.27 Capsicum annuum HOM05D005506 ORTHO05D004172 6.6e-20 100.9 112 47.3
CAN.G101.1 Capsicum annuum HOM05D005506 ORTHO05D004172 1.3e-18 96.7 112 50.0
CAN.G520.8 Capsicum annuum HOM05D005506 ORTHO05D004172 2.1e-18 95.9 112 47.3
CAN.G989.1 Capsicum annuum HOM05D005506 ORTHO05D004172 2.1e-18 95.9 63 77.8
CAN.G1669.5 Capsicum annuum HOM05D002496 ORTHO05D002787 1.4e-17 93.2 79 57.0
CAN.G1799.8 Capsicum annuum HOM05D005506 ORTHO05D004172 1.8e-17 92.8 82 56.1
CAN.G164.13 Capsicum annuum HOM05D005506 ORTHO05D004172 4.0e-17 91.7 107 46.7
CAN.G123.4 Capsicum annuum HOM05D005506 ORTHO05D004172 6.9e-17 90.9 94 51.1
CAN.G1308.1 Capsicum annuum HOM05D005506 ORTHO05D004172 2.6e-16 89.0 97 49.5
CAN.G156.11 Capsicum annuum HOM05D005506 ORTHO05D004172 5.8e-16 87.8 93 48.4
PGSC0003DMG400037500 Solanum tuberosum HOM05D005506 ORTHO05D004172 1.7e-15 86.3 83 55.4
CAN.G797.11 Capsicum annuum HOM05D005506 ORTHO05D004172 6.4e-15 84.3 48 83.3
CAN.G298.30 Capsicum annuum HOM05D005506 ORTHO05D004172 5.4e-14 81.3 74 58.1
CAN.G716.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.2e-13 80.1 82 53.7
CAN.G767.51 Capsicum annuum HOM05D005506 ORTHO05D004172 1.2e-13 80.1 69 56.5
CAN.G1437.3 Capsicum annuum HOM05D005506 ORTHO05D004172 2.1e-13 79.3 72 52.8
Sopen06g004040 Solanum pennellii HOM05D011490 ORTHO05D004172 6.0e-13 77.8 102 40.2
Nitab4.5_0001063g0060 Nicotiana tabacum HOM05D005506 ORTHO05D004172 3.9e-12 75.1 108 37.0
Sopen09g013570 Solanum pennellii HOM05D000017 ORTHO05D004172 6.7e-12 74.3 102 40.2
Sopen09g015940 Solanum pennellii HOM05D005506 ORTHO05D004172 8.7e-12 73.9 108 35.2
PGSC0003DMG401009023 Solanum tuberosum HOM05D000017 ORTHO05D000013 8.7e-12 73.9 102 38.2
PGSC0003DMG400038069 Solanum tuberosum HOM05D000017 ORTHO05D004172 2.1e-10 69.3 102 39.2
CAN.G755.6 Capsicum annuum HOM05D005506 ORTHO05D004172 2.4e-09 65.9 67 47.8
CAN.G1127.3 Capsicum annuum HOM05D001217 ORTHO05D004172 6.9e-09 64.3 112 37.5
CAN.G78.32 Capsicum annuum HOM05D005506 ORTHO05D004172 9.0e-09 63.9 60 50.0
THA.LOC104825417 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.0e-08 62.8 111 34.2
Sopen08g006280 Solanum pennellii HOM05D000017 ORTHO05D004172 2.6e-08 62.4 85 37.6
CANSAT56G3039 Cannabis sativa HOM05D000017 ORTHO05D000013 4.5e-08 61.6 105 35.2
CAN.G1214.10 Capsicum annuum HOM05D005506 ORTHO05D004172 9.9e-08 60.5 58 56.9
CAN.G1014.53 Capsicum annuum HOM05D000261 ORTHO05D004172 1.3e-07 60.1 113 38.1
THA.LOC104817109 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.9e-07 58.9 112 33.9
CAN.G954.3 Capsicum annuum HOM05D005506 ORTHO05D004172 4.9e-07 58.2 50 54.0
Oeu010760.1 Olea europaea HOM05D000017 ORTHO05D000013 4.9e-07 58.2 109 33.0
Oeu044755.1 Olea europaea HOM05D000017 ORTHO05D000013 4.9e-07 58.2 109 33.0
CANSAT11G1978 Cannabis sativa HOM05D000017 ORTHO05D000013 6.4e-07 57.8 113 31.0
Atru.chr9.269 Acer truncatum HOM05D000017 ORTHO05D000013 1.1e-06 57.0 106 28.3
TAR059G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.1e-06 57.0 106 32.1
Atru.chr1.1594 Acer truncatum HOM05D000017 ORTHO05D000013 1.4e-06 56.6 103 30.1
Nitab4.5_0000204g0100 Nicotiana tabacum HOM05D005506 ORTHO05D004172 1.4e-06 56.6 82 39.0
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-06 56.2 106 27.4
Atru.chr9.32 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-06 56.2 106 27.4
CANSAT56G0827 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-06 56.2 106 32.1
Oeu007458.1 Olea europaea HOM05D000017 ORTHO05D000013 3.2e-06 55.5 109 32.1
THA.LOC104810610 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.2e-06 55.5 112 32.1
TAR118G0002 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.2e-06 55.1 106 31.1
TAR286G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.2e-06 55.1 106 31.1
TAR445G0003 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.2e-06 55.1 106 31.1
TAR640G0005 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.2e-06 55.1 106 31.1
Atru.chr9.234 Acer truncatum HOM05D000017 ORTHO05D000013 5.5e-06 54.7 106 27.4
Oeu062688.1 Olea europaea HOM05D000017 ORTHO05D000013 5.5e-06 54.7 111 31.5
Sopen02g009890 Solanum pennellii HOM05D005506 ORTHO05D004172 5.5e-06 54.7 52 50.0
THA.LOC104801857 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 7.1e-06 54.3 111 28.8
Nitab4.5_0001672g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 9.3e-06 53.9 103 33.0


User provided reference genes

Program Settings