Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G8.48 Capsicum annuum HOM05D001816 ORTHO05D115362 6.6e-108 394.0 198 100.0
CAN.G1041.47 Capsicum annuum HOM05D001816 ORTHO05D003233 2.0e-19 100.1 58 84.5
CAN.G1235.26 Capsicum annuum HOM05D001816 ORTHO05D002001 5.7e-19 98.6 59 81.4
QL11p055697 Quercus lobata HOM05D001816 ORTHO05D002001 9.8e-19 97.8 99 51.5
Nitab4.5_0002486g0050 Nicotiana tabacum HOM05D001816 ORTHO05D002001 1.3e-18 97.4 67 74.6
Nitab4.5_0003603g0030 Nicotiana tabacum HOM05D001816 ORTHO05D002001 1.3e-18 97.4 67 74.6
Peaxi162Scf00362g00360 Petunia axillaris HOM05D001816 ORTHO05D002001 1.3e-18 97.4 67 74.6
Cpa.g.sc20.161 Carica papaya HOM05D001816 ORTHO05D002001 1.7e-18 97.1 114 53.5
QL11p055386 Quercus lobata HOM05D001816 ORTHO05D002001 1.7e-18 97.1 85 60.0
Actinidia20551 Actinidia chinensis HOM05D001816 ORTHO05D002001 2.2e-18 96.7 94 55.3
CSS0006826 Camellia sinensis var. sinensis HOM05D001816 ORTHO05D002001 2.2e-18 96.7 59 78.0
CAN.G1041.49 Capsicum annuum HOM05D001816 ORTHO05D003233 3.7e-18 95.9 58 81.0
Solyc01g111990.3 Solanum lycopersicum HOM05D001816 ORTHO05D002001 6.3e-18 95.1 59 79.7
Sopen01g054040 Solanum pennellii HOM05D001816 ORTHO05D002001 6.3e-18 95.1 59 79.7
TPR.G38581 Trifolium pratense HOM05D001816 ORTHO05D002001 6.3e-18 95.1 94 54.3
Atru.chr5.3488 Acer truncatum HOM05D001816 ORTHO05D002001 8.3e-18 94.7 94 55.3
Sabra09G0109800 Salix brachista HOM05D001816 ORTHO05D002001 1.1e-17 94.4 94 56.4
CANSAT25G0387 Cannabis sativa HOM05D001816 ORTHO05D002001 1.8e-17 93.6 92 54.3
AUR62009961 Chenopodium quinoa HOM05D001816 ORTHO05D002001 1.8e-17 93.6 59 72.9
Oeu051849.1 Olea europaea HOM05D001816 ORTHO05D002001 2.4e-17 93.2 59 74.6
Potri.009G141300 Populus trichocarpa HOM05D001816 ORTHO05D002001 2.4e-17 93.2 94 55.3
Rhsim05G0050000 Rhododendron simsii HOM05D001816 ORTHO05D002001 2.4e-17 93.2 66 72.7
Aqoxy6G01808 Aquilegia oxysepala HOM05D001816 ORTHO05D002001 3.1e-17 92.8 57 75.4
arahy.Tifrunner.gnm1.ann1.1BU1FJ Arachis hypogaea HOM05D001816 ORTHO05D002001 3.1e-17 92.8 76 61.8
arahy.Tifrunner.gnm1.ann1.X97WXI Arachis hypogaea HOM05D001816 ORTHO05D002001 3.1e-17 92.8 76 61.8
FAN15G3397 Fragaria x ananassa HOM05D001816 ORTHO05D002001 3.1e-17 92.8 92 53.3
VMungo1309G1075 Vigna mungo HOM05D001816 ORTHO05D002001 3.1e-17 92.8 94 54.3
AUR62012953 Chenopodium quinoa HOM05D001816 ORTHO05D002001 4.1e-17 92.4 59 71.2
Glyma.04G001600 Glycine max HOM05D001816 ORTHO05D002001 5.4e-17 92.0 94 53.2
Lj1g0012910 Lotus japonicus HOM05D001816 ORTHO05D002001 5.4e-17 92.0 59 74.6
PSO170G2372 Papaver somniferum HOM05D001816 ORTHO05D002001 5.4e-17 92.0 94 52.1
Prupe.8G174300 Prunus persica HOM05D001816 ORTHO05D002001 5.4e-17 92.0 94 52.1
vmacro17274 Vaccinium macrocarpon HOM05D001816 ORTHO05D002001 5.4e-17 92.0 94 52.1
BcaC03g13917 Brassica carinata HOM05D001816 ORTHO05D002001 7.0e-17 91.7 57 77.2
C02p11280 Brassica napus HOM05D001816 ORTHO05D002001 7.0e-17 91.7 57 77.2
BolC2t07196H Brassica oleracea HOM05D001816 ORTHO05D002001 7.0e-17 91.7 57 77.2
BraA02t05688Z Brassica rapa HOM05D001816 ORTHO05D002001 7.0e-17 91.7 57 77.2
CAN.G2.9 Capsicum annuum HOM05D001816 ORTHO05D115796 7.0e-17 91.7 56 80.4
Cfa005345 Carpinus fangiana HOM05D001816 ORTHO05D002001 7.0e-17 91.7 92 53.3
Ciclev10030103m.g Citrus clementina HOM05D001816 ORTHO05D002001 7.0e-17 91.7 59 74.6
Haze_02022 Corylus avellana HOM05D001816 ORTHO05D002001 7.0e-17 91.7 92 53.3
FvH4_2g16070 Fragaria vesca HOM05D001816 ORTHO05D002001 7.0e-17 91.7 92 53.3
FAN24G0316 Fragaria x ananassa HOM05D001816 ORTHO05D002001 7.0e-17 91.7 92 53.3
FAN27G0881 Fragaria x ananassa HOM05D001816 ORTHO05D002001 7.0e-17 91.7 92 53.3
Phvul.009G116900 Phaseolus vulgaris HOM05D001816 ORTHO05D002001 7.0e-17 91.7 94 53.2
Psat5g000880 Pisum sativum HOM05D001816 ORTHO05D002001 7.0e-17 91.7 94 53.2
RcHm_v2.0_Chr6g0279751 Rosa chinensis HOM05D001816 ORTHO05D002001 7.0e-17 91.7 92 53.3
Migut.B00031 Erythranthe guttata HOM05D001816 ORTHO05D002001 9.1e-17 91.3 59 72.9
FAN20G1974 Fragaria x ananassa HOM05D001816 ORTHO05D002001 9.1e-17 91.3 64 73.4
Glyma.06G001100 Glycine max HOM05D001816 ORTHO05D002001 9.1e-17 91.3 94 53.2
TAR628G0285 Trochodendron aralioides HOM05D001816 ORTHO05D002001 9.1e-17 91.3 57 75.4
Cc09_g10520 Coffea canephora HOM05D001816 ORTHO05D002001 1.2e-16 90.9 57 75.4
DCAR_022835 Daucus carota HOM05D001816 ORTHO05D002001 1.2e-16 90.9 156 37.2
Manes.04G068300 Manihot esculenta HOM05D001816 ORTHO05D002001 1.2e-16 90.9 94 55.3
Medtr3g118360 Medicago truncatula HOM05D001816 ORTHO05D002001 1.2e-16 90.9 96 54.2
Phvul.007G142900 Phaseolus vulgaris HOM05D001816 ORTHO05D002001 1.2e-16 90.9 94 53.2
EL10Ac9g21289 Beta vulgaris HOM05D001816 ORTHO05D002001 1.6e-16 90.5 59 69.5
CiPaw.05G091200 Carya illinoinensis HOM05D001816 ORTHO05D002001 1.6e-16 90.5 94 50.0
Eucgr.I01492 Eucalyptus grandis HOM05D001816 ORTHO05D002001 1.6e-16 90.5 67 68.7
Lalb_Chr08g0246781 Lupinus albus HOM05D001816 ORTHO05D002001 1.6e-16 90.5 76 60.5
MD10G1133000 Malus domestica HOM05D001816 ORTHO05D002001 1.6e-16 90.5 94 51.1
THA.LOC104807386 Tarenaya hassleriana HOM05D001816 ORTHO05D002001 1.6e-16 90.5 59 74.6
AUR62030935 Chenopodium quinoa HOM05D001816 ORTHO05D002001 2.0e-16 90.1 59 69.5
SGA_v2.0_scaffold32G13329 Striga asiatica HOM05D001816 ORTHO05D002001 2.0e-16 90.1 102 49.0
TWI31G0479 Tripterygium wilfordii HOM05D001816 ORTHO05D002001 2.0e-16 90.1 59 72.9
Ca_15279_v3 Cicer arietinum L. HOM05D001816 ORTHO05D002001 2.7e-16 89.7 59 72.9
ECA233G4820 Erigeron canadensis HOM05D001816 ORTHO05D002001 2.7e-16 89.7 94 51.1
BNapus_Darmor_BZH_scaffold_38p00390 Brassica napus HOM05D001816 ORTHO05D002001 3.5e-16 89.4 57 75.4
ClCG02G010990 Citrullus lanatus HOM05D001816 ORTHO05D002001 3.5e-16 89.4 59 69.5
CsaV3_6G012710 Cucumis sativus L. HOM05D001816 ORTHO05D002001 3.5e-16 89.4 59 69.5
SalBow1G5513 Salvia bowleyana HOM05D001816 ORTHO05D002001 3.5e-16 89.4 77 58.4
Dinv41898 Davidia involucrata HOM05D001816 ORTHO05D002001 4.5e-16 89.0 57 75.4
Thhalv10012575m.g Eutrema salsugineum HOM05D001816 ORTHO05D002001 4.5e-16 89.0 57 75.4
Zm00001eb371640 Zea mays HOM05D001816 ORTHO05D002001 4.5e-16 89.0 76 59.2
Aa31LG2G15270 Aethionema arabicum HOM05D001816 ORTHO05D002001 7.7e-16 88.2 86 58.1
Ah.01g023480 Amaranthus hybridus HOM05D001816 ORTHO05D002001 7.7e-16 88.2 59 69.5
MELO3C013645.2 Cucumis melo HOM05D001816 ORTHO05D002001 7.7e-16 88.2 59 69.5
HanXRQChr17g0559451 Helianthus annuus HOM05D001816 ORTHO05D002001 7.7e-16 88.2 151 38.4
MD10G1133100 Malus domestica HOM05D001816 ORTHO05D002001 7.7e-16 88.2 59 67.8
Nn6g31779 Nelumbo nucifera HOM05D001816 ORTHO05D002001 7.7e-16 88.2 176 35.8
Sc12g0007070 Simmondsia chinensis HOM05D001816 ORTHO05D002001 7.7e-16 88.2 96 50.0
GSVIVG01023918001 Vitis vinifera HOM05D001816 ORTHO05D002001 7.7e-16 88.2 94 50.0
Lj9C403T6 Lonicera japonica HOM05D001816 ORTHO05D002001 1.0e-15 87.8 57 73.7
unitig_21.g20851 Utricularia gibba HOM05D001816 ORTHO05D002001 1.3e-15 87.4 104 44.2
Carub.0006s2052 Capsella rubella HOM05D001816 ORTHO05D002001 2.2e-15 86.7 153 38.6
CARHR190770 Cardamine hirsuta HOM05D001816 ORTHO05D002001 2.2e-15 86.7 59 71.2
Sp6g22620 Schrenkiella parvula HOM05D001816 ORTHO05D002001 2.2e-15 86.7 57 73.7
Hund20638 Selenicereus undatus HOM05D001816 ORTHO05D002001 2.2e-15 86.7 59 69.5
BcaB05g22693 Brassica carinata HOM05D001816 ORTHO05D002001 2.9e-15 86.3 79 63.3
Sed0019949 Sechium edule HOM05D001816 ORTHO05D002001 3.8e-15 85.9 96 51.0
Lsat_1_v5_gn_8_121800 Lactuca sativa HOM05D001816 ORTHO05D002001 5.0e-15 85.5 59 67.8
AT5G22800 Arabidopsis thaliana HOM05D001816 ORTHO05D002001 8.5e-15 84.7 153 37.3
AL6G33900 Arabidopsis lyrata HOM05D001816 ORTHO05D002001 1.1e-14 84.3 92 52.2
CDE05G0454 Ceratophyllum demersum HOM05D001816 ORTHO05D002001 1.1e-14 84.3 75 54.7
SEGI_06689 Sequoiadendron giganteum HOM05D001816 ORTHO05D002001 1.1e-14 84.3 65 58.5
vmacro17275 Vaccinium macrocarpon HOM05D001816 ORTHO05D002001 1.5e-14 84.0 58 69.0
COL.COLO4_17969 Corchorus olitorius HOM05D001816 ORTHO05D002001 2.5e-14 83.2 95 53.7
Duzib132G0368 Durio zibethinus HOM05D001816 ORTHO05D002001 3.2e-14 82.8 95 53.7
PGR142G1779 Punica granatum HOM05D001816 ORTHO05D002001 3.2e-14 82.8 62 74.2
Thecc.02G050000 Theobroma cacao HOM05D001816 ORTHO05D002001 5.5e-14 82.0 95 52.6
Gohir.A03G208200 Gossypium hirsutum HOM05D001816 ORTHO05D002001 7.2e-14 81.6 93 51.6
Gohir.D02G229700 Gossypium hirsutum HOM05D001816 ORTHO05D002001 7.2e-14 81.6 93 51.6
Gorai.005G257400 Gossypium raimondii HOM05D001816 ORTHO05D002001 7.2e-14 81.6 93 51.6
CDE05G1766 Ceratophyllum demersum HOM05D001816 ORTHO05D002001 9.4e-14 81.3 53 77.4
SMO234G0071 Selaginella moellendorffii HOM05D001816 ORTHO05D002001 1.2e-13 80.9 63 66.7
ATR0712G016 Amborella trichopoda HOM05D001816 ORTHO05D002001 1.6e-13 80.5 67 59.7
CAN.G364.2 Capsicum annuum HOM05D001816 ORTHO05D012714 1.0e-12 77.8 46 82.6
MD05G1130000 Malus domestica HOM05D001816 ORTHO05D002001 1.0e-12 77.8 44 81.8
RcHm_v2.0_Chr6g0279761 Rosa chinensis HOM05D001816 ORTHO05D002001 1.0e-12 77.8 50 80.0
AagrBONN_evm.TU.Sc2ySwM_368.2591 Anthoceros agrestis HOM05D001816 ORTHO05D002001 5.2e-12 75.5 50 74.0
CAN.G1224.1 Capsicum annuum HOM05D001816 ORTHO05D002001 6.8e-12 75.1 49 75.5
ECA238G3345 Erigeron canadensis HOM05D001816 ORTHO05D002001 1.5e-11 73.9 55 69.1
Pp3c2_4380 Physcomitrium patens HOM05D001816 ORTHO05D002001 1.5e-11 73.9 50 74.0
Mapoly0065s0015 Marchantia polymorpha HOM05D001816 ORTHO05D002001 1.7e-10 70.5 57 54.4
Cre08.g368900 Chlamydomonas reinhardtii HOM05D001816 ORTHO05D002001 3.1e-09 66.2 63 58.7
CAN.G1070.1 Capsicum annuum HOM05D037715 ORTHO05D115789 1.2e-08 64.3 67 55.2
MCO11G803 Micromonas commoda HOM05D001816 ORTHO05D002001 1.6e-08 63.9 59 52.5
CBR_g32429 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-08 62.8 50 64.0
CAN.G473.58 Capsicum annuum HOM05D003681 ORTHO05D004703 5.9e-08 62.0 105 40.0
CAN.G22236.1 Capsicum annuum HOM05D037715 ORTHO05D115475 7.7e-08 61.6 67 52.2
HPP92_010846 Vanilla planifolia HOM05D001816 ORTHO05D002001 7.7e-08 61.6 36 83.3
Nitab4.5_0001863g0130 Nicotiana tabacum HOM05D003681 ORTHO05D004703 1.0e-07 61.2 106 40.6
PRCOL_00002617 Prasinoderma coloniale HOM05D001816 ORTHO05D002001 1.0e-07 61.2 59 47.5
CAN.G254.6 Capsicum annuum HOM05D037715 ORTHO05D115883 1.9e-06 57.0 50 56.0
Peaxi162Scf00420g00351 Petunia axillaris HOM05D003681 ORTHO05D004703 3.3e-06 56.2 39 74.4
Nitab4.5_0008718g0020 Nicotiana tabacum HOM05D003681 ORTHO05D004703 5.6e-06 55.5 104 39.4
BcaC08g43202 Brassica carinata HOM05D001816 ORTHO05D002001 9.5e-06 54.7 55 45.5


User provided reference genes

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