Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G691.12 Capsicum annuum HOM05D011392 ORTHO05D001803 2.1e-85 318.9 157 100.0
PGSC0003DMG400016245 Solanum tuberosum HOM05D011392 ORTHO05D001803 4.2e-49 198.4 158 66.5
Nitab4.5_0008779g0010 Nicotiana tabacum HOM05D011392 ORTHO05D001803 1.6e-32 143.3 167 47.9
Nitab4.5_0002359g0010 Nicotiana tabacum HOM05D011392 ORTHO05D001803 4.7e-32 141.7 168 49.4
Nitab4.5_0001201g0030 Nicotiana tabacum HOM05D011392 ORTHO05D001803 4.4e-30 135.2 169 46.2
Nitab4.5_0010390g0010 Nicotiana tabacum HOM05D011392 ORTHO05D001803 4.8e-29 131.7 152 47.4
PGSC0003DMG400027576 Solanum tuberosum HOM05D011392 ORTHO05D001803 1.6e-27 126.7 151 45.0
Peaxi162Scf00025g00215 Petunia axillaris HOM05D011392 ORTHO05D001803 1.0e-26 124.0 94 57.4
Peaxi162Scf00025g02118 Petunia axillaris HOM05D011392 ORTHO05D001803 1.0e-26 124.0 109 51.4
Peaxi162Scf00025g00213 Petunia axillaris HOM05D011392 ORTHO05D001803 1.3e-26 123.6 102 53.9
Solyc06g048400.1 Solanum lycopersicum HOM05D011392 ORTHO05D001803 1.6e-24 116.7 154 44.2
Peaxi162Scf00025g00214 Petunia axillaris HOM05D011392 ORTHO05D001803 1.0e-23 114.0 102 50.0
Peaxi162Scf00025g02120 Petunia axillaris HOM05D011392 ORTHO05D001803 6.8e-15 84.7 56 62.5
Peaxi162Scf00025g02115 Petunia axillaris HOM05D011392 ORTHO05D001803 2.0e-14 83.2 61 57.4
Peaxi162Scf00025g02117 Petunia axillaris HOM05D011392 ORTHO05D001803 2.6e-14 82.8 58 60.3
Peaxi162Scf00025g02114 Petunia axillaris HOM05D011392 ORTHO05D001803 2.8e-13 79.3 57 56.1
Peaxi162Scf00025g02119 Petunia axillaris HOM05D011392 ORTHO05D001803 2.0e-11 73.2 61 54.1
Glyma.06G245500 Glycine max HOM05D010700 ORTHO05D012225 5.6e-09 65.1 117 27.4
Thecc.10G125700 Theobroma cacao HOM05D002073 ORTHO05D001803 1.0e-07 60.8 90 34.4
Migut.F01215 Erythranthe guttata HOM05D002073 ORTHO05D001803 1.4e-07 60.5 107 29.0
RcHm_v2.0_Chr5g0053121 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053141 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053151 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053161 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053171 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053181 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053191 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053201 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053221 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053231 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053241 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053251 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0053271 Rosa chinensis HOM05D008521 ORTHO05D000988 2.6e-06 56.2 87 36.8
RcHm_v2.0_Chr5g0051281 Rosa chinensis HOM05D008521 ORTHO05D000988 3.4e-06 55.8 87 35.6
RcHm_v2.0_Chr5g0051291 Rosa chinensis HOM05D008521 ORTHO05D000988 3.4e-06 55.8 87 35.6
RcHm_v2.0_Chr5g0051301 Rosa chinensis HOM05D008521 ORTHO05D000988 3.4e-06 55.8 87 35.6
RcHm_v2.0_Chr5g0051311 Rosa chinensis HOM05D008521 ORTHO05D000988 3.4e-06 55.8 87 35.6
RcHm_v2.0_Chr5g0051321 Rosa chinensis HOM05D008521 ORTHO05D000988 3.4e-06 55.8 87 35.6
RcHm_v2.0_Chr5g0051331 Rosa chinensis HOM05D008521 ORTHO05D000988 3.4e-06 55.8 87 35.6
RcHm_v2.0_Chr5g0051341 Rosa chinensis HOM05D008521 ORTHO05D000988 3.4e-06 55.8 87 35.6
RcHm_v2.0_Chr5g0053391 Rosa chinensis HOM05D008521 ORTHO05D000988 3.4e-06 55.8 87 35.6
Prupe.2G072700 Prunus persica HOM05D002073 ORTHO05D001803 7.5e-06 54.7 95 30.5
RcHm_v2.0_Chr5g0046951 Rosa chinensis HOM05D008521 ORTHO05D000988 7.5e-06 54.7 87 34.5
RcHm_v2.0_Chr5g0046961 Rosa chinensis HOM05D008521 ORTHO05D000988 7.5e-06 54.7 87 34.5
RcHm_v2.0_Chr5g0046971 Rosa chinensis HOM05D008521 ORTHO05D000988 7.5e-06 54.7 87 34.5
RcHm_v2.0_Chr5g0069271 Rosa chinensis HOM05D008521 ORTHO05D000988 7.5e-06 54.7 87 34.5
RcHm_v2.0_Chr5g0069281 Rosa chinensis HOM05D008521 ORTHO05D000988 7.5e-06 54.7 87 34.5
RcHm_v2.0_Chr5g0069291 Rosa chinensis HOM05D008521 ORTHO05D000988 7.5e-06 54.7 87 34.5
RcHm_v2.0_Chr5g0069301 Rosa chinensis HOM05D008521 ORTHO05D000988 7.5e-06 54.7 87 34.5
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 9.8e-06 54.3 77 32.5
Thecc.07G085200 Theobroma cacao HOM05D002073 ORTHO05D001803 9.8e-06 54.3 90 30.0
Thecc.07G085500 Theobroma cacao HOM05D002073 ORTHO05D001803 9.8e-06 54.3 90 30.0
Thecc.07G086100 Theobroma cacao HOM05D002073 ORTHO05D001803 9.8e-06 54.3 90 30.0


User provided reference genes

Program Settings