Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G584.64 Capsicum annuum HOM05D009059 ORTHO05D011207 7.8e-55 216.9 107 100.0
CAN.G584.67 Capsicum annuum HOM05D009059 ORTHO05D011207 1.5e-45 186.0 107 83.2
CAN.G1084.27 Capsicum annuum HOM05D009059 ORTHO05D011207 1.9e-45 185.7 107 82.2
CAN.G1610.5 Capsicum annuum HOM05D009059 ORTHO05D011207 3.6e-44 181.4 107 82.2
CAN.G584.65 Capsicum annuum HOM05D009059 ORTHO05D011207 8.1e-44 180.3 107 81.3
CAN.G534.6 Capsicum annuum HOM05D009059 ORTHO05D011207 8.9e-43 176.8 105 81.9
CAN.G1084.28 Capsicum annuum HOM05D009059 ORTHO05D011207 4.7e-36 154.5 86 79.1
CAN.G1610.6 Capsicum annuum HOM05D009059 ORTHO05D011207 6.9e-35 150.6 86 79.1
CAN.G3387.1 Capsicum annuum HOM05D009059 ORTHO05D011207 2.0e-34 149.1 85 80.0
CAN.G1084.24 Capsicum annuum HOM05D009059 ORTHO05D011207 5.8e-34 147.5 104 70.2
CAN.G584.62 Capsicum annuum HOM05D009059 ORTHO05D011207 1.3e-30 136.3 104 65.4
Sopen11g012530 Solanum pennellii HOM05D009059 ORTHO05D011207 3.6e-28 128.3 104 60.6
Solyc07g006380.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.1e-27 126.7 104 60.6
Solyc11g028070.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.1e-27 126.7 104 60.6
Sopen07g002470 Solanum pennellii HOM05D009059 ORTHO05D011207 4.0e-27 124.8 104 60.6
CAN.G1084.29 Capsicum annuum HOM05D009059 ORTHO05D011207 7.6e-26 120.6 66 80.3
CAN.G584.63 Capsicum annuum HOM05D009059 ORTHO05D011207 1.3e-25 119.8 97 60.8
Solyc11g028040.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.1e-24 116.7 104 57.7
Solyc07g150108.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 7.1e-24 114.0 85 64.7
Solyc07g016095.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 3.5e-23 111.7 85 63.5
Nitab4.5_0005347g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 5.1e-22 107.8 105 57.1
Nitab4.5_0001626g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 3.3e-21 105.1 105 56.2
Nitab4.5_0001626g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 3.3e-21 105.1 105 56.2
Nitab4.5_0003765g0030 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.1e-20 102.4 105 52.4
Nitab4.5_0005404g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.1e-20 102.4 105 54.3
Nitab4.5_0003165g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.2e-17 92.4 105 52.4
Nitab4.5_0001882g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.9e-16 89.4 105 47.6
CAN.G5797.1 Capsicum annuum HOM05D009059 ORTHO05D011207 3.7e-12 75.1 57 57.9
Peaxi162Scf00297g00816 Petunia axillaris HOM05D009059 ORTHO05D011207 1.8e-11 72.8 104 37.5
Peaxi162Scf00005g00041 Petunia axillaris HOM05D009059 ORTHO05D011207 2.4e-11 72.4 105 40.0
Nitab4.5_0001882g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 4.0e-11 71.6 77 46.8
Peaxi162Scf00297g00815 Petunia axillaris HOM05D009059 ORTHO05D011207 4.0e-11 71.6 105 39.0
Solyc07g016120.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.0e-10 69.3 60 58.3
Sopen07g005870 Solanum pennellii HOM05D000082 ORTHO05D000038 2.6e-10 68.9 58 60.3
Lalb_Chr16g0392501 Lupinus albus HOM05D001231 ORTHO05D001012 2.5e-08 62.4 46 50.0
Solyc07g016113.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.5e-08 62.4 104 37.5
Peaxi162Scf00005g00035 Petunia axillaris HOM05D009059 ORTHO05D011207 3.2e-08 62.0 75 45.3
PSO675G5343 Papaver somniferum HOM05D001231 ORTHO05D001012 5.5e-08 61.2 76 42.1
Solyc11g028060.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.2e-07 60.1 49 57.1
Gorai.002G043900 Gossypium raimondii HOM05D001231 ORTHO05D001012 1.6e-07 59.7 76 39.5
Gorai.002G044100 Gossypium raimondii HOM05D001231 ORTHO05D001012 1.6e-07 59.7 76 39.5
Gohir.A01G044800 Gossypium hirsutum HOM05D001231 ORTHO05D001012 2.1e-07 59.3 71 38.0
Gohir.D01G036200 Gossypium hirsutum HOM05D001231 ORTHO05D001012 2.1e-07 59.3 47 46.8
Gohir.D01G035800 Gossypium hirsutum HOM05D001231 ORTHO05D001012 2.7e-07 58.9 76 39.5
Gohir.D01G035700 Gossypium hirsutum HOM05D001231 ORTHO05D001012 3.5e-07 58.5 71 36.6
Gorai.002G043800 Gossypium raimondii HOM05D001231 ORTHO05D001012 4.6e-07 58.2 71 36.6
PSO541G0572 Papaver somniferum HOM05D001231 ORTHO05D001012 6.0e-07 57.8 55 43.6
Phvul.002G278500 Phaseolus vulgaris HOM05D001231 ORTHO05D001012 6.0e-07 57.8 68 42.6
PGSC0003DMG400015132 Solanum tuberosum HOM05D001231 ORTHO05D001012 6.0e-07 57.8 64 39.1
Carub.0005s0120 Capsella rubella HOM05D001231 ORTHO05D001012 7.9e-07 57.4 73 37.0
DCAR_026846 Daucus carota HOM05D001231 ORTHO05D001012 7.9e-07 57.4 52 46.2
Gohir.D01G036000 Gossypium hirsutum HOM05D001231 ORTHO05D001012 1.0e-06 57.0 76 38.2
Os02g0172000 Oryza sativa ssp. japonica HOM05D001231 ORTHO05D001012 1.0e-06 57.0 60 40.0
Thhalv10005228m.g Eutrema salsugineum HOM05D001231 ORTHO05D001012 1.3e-06 56.6 78 34.6
Nn7g38191 Nelumbo nucifera HOM05D001231 ORTHO05D001012 1.3e-06 56.6 72 38.9
CANSAT54G0755 Cannabis sativa HOM05D001231 ORTHO05D001012 1.8e-06 56.2 64 39.1
Migut.E00740 Erythranthe guttata HOM05D001231 ORTHO05D001012 1.8e-06 56.2 69 34.8
Migut.M01516 Erythranthe guttata HOM05D001231 ORTHO05D001012 2.3e-06 55.8 72 36.1
Psat4g112240 Pisum sativum HOM05D001231 ORTHO05D001012 2.3e-06 55.8 77 39.0
SGA_v2.0_scaffold23G10223 Striga asiatica HOM05D001231 ORTHO05D001012 2.3e-06 55.8 76 36.8
Carub.0005s0116 Capsella rubella HOM05D001231 ORTHO05D001012 3.0e-06 55.5 78 34.6
CDE04G2371 Ceratophyllum demersum HOM05D001231 ORTHO05D001012 3.0e-06 55.5 68 39.7
GSVIVG01000230001 Vitis vinifera HOM05D001231 ORTHO05D001012 3.0e-06 55.5 47 51.1
PGSC0003DMG400015133 Solanum tuberosum HOM05D001231 ORTHO05D001012 3.9e-06 55.1 46 50.0
Carub.0005s0115 Capsella rubella HOM05D001231 ORTHO05D001012 5.1e-06 54.7 78 33.3
Thhalv10005229m.g Eutrema salsugineum HOM05D001231 ORTHO05D001012 5.1e-06 54.7 78 34.6
Duzib268G0537 Durio zibethinus HOM05D001231 ORTHO05D001012 6.7e-06 54.3 70 40.0
Duzib268G0639 Durio zibethinus HOM05D001231 ORTHO05D001012 6.7e-06 54.3 70 41.4
AL5G11400 Arabidopsis lyrata HOM05D001231 ORTHO05D001012 8.7e-06 53.9 73 39.7
AT2G02147 Arabidopsis thaliana HOM05D001231 ORTHO05D001012 8.7e-06 53.9 72 38.9
CAN.G976.4 Capsicum annuum HOM05D001231 ORTHO05D001012 8.7e-06 53.9 80 38.8
Nn7g38190 Nelumbo nucifera HOM05D001231 ORTHO05D001012 8.7e-06 53.9 69 37.7


User provided reference genes

Program Settings