Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G362.43 Capsicum annuum HOM05D003841 ORTHO05D004602 7.0e-62 240.7 149 100.0
CAN.G183.13 Capsicum annuum HOM05D003841 ORTHO05D004602 3.7e-47 191.8 155 70.3
CAN.G1160.11 Capsicum annuum HOM05D003841 ORTHO05D004602 8.3e-39 164.1 161 60.2
CAN.G952.3 Capsicum annuum HOM05D003841 ORTHO05D004602 1.1e-25 120.6 165 50.9
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 7.6e-24 114.4 214 40.7
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 3.2e-22 109.0 217 38.7
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 2.1e-21 106.3 215 42.3
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 4.6e-21 105.1 217 41.9
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 7.3e-19 97.8 215 37.2
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 3.4e-16 89.0 214 35.5
CAN.G777.9 Capsicum annuum HOM05D003841 ORTHO05D004602 1.4e-14 83.6 82 61.0
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 2.5e-11 72.8 181 35.9
CAN.G526.7 Capsicum annuum HOM05D009195 ORTHO05D000137 9.6e-11 70.9 44 81.8
CAN.G1207.10 Capsicum annuum HOM05D003841 ORTHO05D004602 2.8e-10 69.3 44 81.8
CAN.G22.51 Capsicum annuum HOM05D000121 ORTHO05D000102 4.8e-10 68.6 43 79.1
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 7.6e-08 61.2 44 63.6
CAN.G935.4 Capsicum annuum HOM05D003841 ORTHO05D004602 1.7e-07 60.1 37 81.1
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 3.8e-07 58.9 42 69.0
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 4.9e-07 58.5 66 47.0
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 6.4e-07 58.2 43 65.1
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.4e-06 57.0 41 65.9
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 1.4e-06 57.0 45 55.6
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 1.9e-06 56.6 39 64.1
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 2.4e-06 56.2 33 75.8
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 2.4e-06 56.2 43 60.5
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 3.2e-06 55.8 43 60.5
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.2e-06 55.8 43 60.5
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.2e-06 55.8 43 60.5
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 3.2e-06 55.8 50 54.0
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 4.2e-06 55.5 85 42.4
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 4.2e-06 55.5 41 68.3
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 5.5e-06 55.1 42 57.1
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 7.1e-06 54.7 42 64.3
ClCG10G006140 Citrullus lanatus HOM05D003841 ORTHO05D004602 7.1e-06 54.7 84 35.7
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 7.1e-06 54.7 42 61.9


User provided reference genes

Program Settings