Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 1.3e-63 246.1 119 100.0
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 2.7e-48 195.3 128 79.7
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 3.1e-44 181.8 128 75.8
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 3.1e-44 181.8 128 75.8
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 5.8e-43 177.6 117 73.5
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 3.2e-41 171.8 114 76.3
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 4.8e-37 157.9 115 67.8
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 1.3e-31 139.8 99 70.7
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 3.9e-31 138.3 123 61.0
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 6.7e-31 137.5 113 61.9
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 6.7e-31 137.5 111 59.5
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 2.5e-30 135.6 105 65.7
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 2.1e-29 132.5 112 63.4
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 2.1e-29 132.5 123 57.7
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 2.8e-29 132.1 86 70.9
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 3.7e-29 131.7 109 59.6
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 8.2e-29 130.6 118 57.6
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 5.3e-28 127.9 111 59.5
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 5.3e-28 127.9 104 62.5
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 5.3e-28 127.9 114 59.6
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 9.0e-28 127.1 111 62.2
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 9.0e-28 127.1 106 60.4
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 9.0e-28 127.1 105 61.9
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 1.2e-27 126.7 110 61.8
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 1.5e-27 126.3 121 54.5
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 1.5e-27 126.3 101 62.4
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 2.0e-27 125.9 114 58.8
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 2.0e-27 125.9 106 57.5
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 3.4e-27 125.2 113 59.3
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 3.4e-27 125.2 113 60.2
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.0e-26 123.6 111 55.9
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.0e-26 123.6 102 61.8
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 1.3e-26 123.2 73 72.6
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.3e-26 123.2 103 61.2
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 1.7e-26 122.9 92 65.2
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 2.2e-26 122.5 119 53.8
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 2.2e-26 122.5 119 53.8
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 2.2e-26 122.5 113 55.8
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 6.5e-26 120.9 93 65.6
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 6.5e-26 120.9 117 56.4
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 8.4e-26 120.6 110 57.3
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 8.4e-26 120.6 106 56.6
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.1e-25 120.2 98 60.2
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 1.1e-25 120.2 89 64.0
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.4e-25 119.8 105 57.1
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.9e-25 119.4 85 69.4
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.9e-25 119.4 110 56.4
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 2.5e-25 119.0 91 67.0
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 3.2e-25 118.6 101 58.4
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 3.2e-25 118.6 75 73.3
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 5.5e-25 117.9 66 77.3
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 7.2e-25 117.5 93 64.5
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 7.2e-25 117.5 117 55.6
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 7.2e-25 117.5 120 53.3
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 1.2e-24 116.7 106 57.5
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 1.2e-24 116.7 93 57.0
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.6e-24 116.3 99 60.6
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.8e-23 112.8 98 62.2
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 1.8e-23 112.8 86 61.6
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 3.9e-23 111.7 117 53.8
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 3.9e-23 111.7 69 66.7
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 3.9e-23 111.7 85 58.8
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 3.9e-23 111.7 108 56.5
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 3.9e-23 111.7 136 46.3
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 8.7e-23 110.5 109 52.3
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 2.5e-22 109.0 107 54.2
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 2.5e-22 109.0 78 64.1
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 4.3e-22 108.2 66 71.2
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 9.7e-22 107.1 68 72.1
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 9.7e-22 107.1 69 66.7
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 1.6e-21 106.3 87 60.9
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.6e-21 106.3 76 63.2
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.6e-21 106.3 111 48.6
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 2.2e-21 105.9 59 78.0
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 2.2e-21 105.9 96 54.2
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 3.7e-21 105.1 71 66.2
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 3.7e-21 105.1 91 61.5
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 3.7e-21 105.1 97 56.7
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 3.7e-21 105.1 97 56.7
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 8.2e-21 104.0 98 54.1
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 8.2e-21 104.0 99 56.6
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.8e-20 102.8 94 59.6
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 2.4e-20 102.4 53 79.2
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 2.4e-20 102.4 106 53.8
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 5.3e-20 101.3 106 53.8
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 9.0e-20 100.5 104 51.0
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.2e-19 100.1 89 56.2
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 1.5e-19 99.8 104 51.9
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 2.0e-19 99.4 94 56.4
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 2.0e-19 99.4 98 54.1
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 2.6e-19 99.0 94 56.4
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.6e-19 99.0 112 49.1
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 3.4e-19 98.6 96 51.0
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 3.4e-19 98.6 99 53.5
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 5.9e-19 97.8 95 51.6
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 5.9e-19 97.8 85 57.6
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 5.0e-18 94.7 74 64.9
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 5.0e-18 94.7 102 50.0
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 1.1e-17 93.6 104 51.9
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 2.0e-14 82.8 67 52.2
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 7.4e-14 80.9 56 69.6
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 9.7e-14 80.5 119 38.7
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.5e-11 73.2 57 54.4
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 1.6e-08 63.2 68 48.5


User provided reference genes

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