Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 3.8e-64 248.1 128 100.0
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.3e-40 169.9 129 73.6
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 2.2e-40 169.1 130 75.4
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 5.7e-36 154.5 128 68.0
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 2.4e-26 122.5 132 57.6
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 3.1e-26 122.1 128 58.6
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 7.7e-25 117.5 124 54.0
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.3e-24 116.7 129 54.3
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 1.5e-23 113.2 125 56.8
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 4.2e-23 111.7 162 48.8
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 2.2e-19 99.4 125 50.4
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 5.0e-16 88.2 123 45.5
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 5.0e-16 88.2 131 48.1
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 8.5e-16 87.4 130 46.2
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 4.2e-15 85.1 102 52.9
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 4.2e-15 85.1 128 46.1
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 5.5e-15 84.7 122 50.0
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 9.4e-15 84.0 131 43.5
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 1.2e-14 83.6 129 46.5
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 2.7e-14 82.4 132 43.2
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 3.6e-14 82.0 88 53.4
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 4.7e-14 81.6 132 47.7
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 4.7e-14 81.6 128 43.8
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 6.1e-14 81.3 121 46.3
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 6.1e-14 81.3 108 50.0
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 1.0e-13 80.5 124 48.4
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.4e-13 80.1 136 44.9
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.8e-13 79.7 134 42.5
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 2.3e-13 79.3 123 43.9
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 3.0e-13 79.0 132 47.7
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 3.0e-13 79.0 118 45.8
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 3.0e-13 79.0 140 40.0
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 5.2e-13 78.2 125 47.2
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 5.2e-13 78.2 136 41.9
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 5.2e-13 78.2 78 59.0
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 1.2e-12 77.0 135 43.0
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 2.0e-12 76.3 120 47.5
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 3.4e-12 75.5 132 43.2
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 3.4e-12 75.5 121 46.3
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 4.4e-12 75.1 126 46.0
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 4.4e-12 75.1 126 46.0
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 4.4e-12 75.1 102 48.0
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 7.5e-12 74.3 83 56.6
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 1.7e-11 73.2 126 44.4
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 1.7e-11 73.2 126 44.4
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 1.7e-11 73.2 93 50.5
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.7e-11 73.2 93 50.5
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 1.7e-11 73.2 125 42.4
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 2.2e-11 72.8 126 45.2
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 2.2e-11 72.8 134 38.8
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 2.2e-11 72.8 130 39.2
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 2.2e-11 72.8 74 58.1
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 2.8e-11 72.4 128 46.1
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.8e-11 72.4 132 38.6
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.8e-11 72.4 129 38.8
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 2.8e-11 72.4 128 41.4
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 3.7e-11 72.0 123 46.3
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 3.7e-11 72.0 112 46.4
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.8e-11 71.6 96 47.9
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 6.3e-11 71.2 125 42.4
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 6.3e-11 71.2 128 44.5
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 6.3e-11 71.2 133 41.4
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 8.3e-11 70.9 82 54.9
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 8.3e-11 70.9 131 37.4
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.4e-10 70.1 61 65.6
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 1.4e-10 70.1 92 44.6
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 1.8e-10 69.7 82 54.9
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 1.8e-10 69.7 126 44.4
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 1.8e-10 69.7 132 37.9
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 4.1e-10 68.6 122 41.8
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 4.1e-10 68.6 131 42.7
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 4.1e-10 68.6 76 55.3
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 7.0e-10 67.8 63 61.9
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 7.0e-10 67.8 63 61.9
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 7.0e-10 67.8 63 61.9
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 7.0e-10 67.8 131 41.2
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 9.1e-10 67.4 146 43.8
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 9.1e-10 67.4 131 39.7
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 1.2e-09 67.0 133 41.4
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 1.2e-09 67.0 50 74.0
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 2.0e-09 66.2 71 57.7
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 2.0e-09 66.2 136 41.2
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 2.0e-09 66.2 93 48.4
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.0e-09 66.2 94 48.9
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.0e-09 66.2 91 47.3
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 2.7e-09 65.9 84 50.0
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 3.5e-09 65.5 92 52.2
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 3.5e-09 65.5 92 52.2
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 4.5e-09 65.1 126 37.3
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 4.5e-09 65.1 148 42.6
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 5.9e-09 64.7 139 42.4
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 5.9e-09 64.7 132 38.6
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 5.9e-09 64.7 83 53.0
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 1.0e-08 63.9 138 42.0
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 1.0e-08 63.9 133 40.6
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 1.0e-08 63.9 78 50.0
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 1.3e-08 63.5 106 38.7
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 1.7e-08 63.2 106 42.5
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 2.2e-08 62.8 124 38.7
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.2e-08 62.8 59 55.9
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 6.5e-08 61.2 127 38.6
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-07 60.5 59 55.9
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 9.4e-07 57.4 128 40.6
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 1.6e-06 56.6 123 33.3
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 2.7e-06 55.8 81 49.4
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 2.7e-06 55.8 97 43.3
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 3.6e-06 55.5 130 33.8
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 4.7e-06 55.1 80 50.0
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 6.1e-06 54.7 111 40.5
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 6.1e-06 54.7 111 36.9


User provided reference genes

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