Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 2.0e-68 262.3 130 100.0
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 2.0e-65 252.3 130 95.4
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 2.2e-64 248.8 130 93.8
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 2.3e-61 238.8 127 92.1
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 4.4e-60 234.6 127 89.0
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 7.5e-60 233.8 130 88.5
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 9.8e-60 233.4 122 94.3
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.3e-59 233.0 127 89.0
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 1.3e-59 233.0 129 88.4
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 1.7e-59 232.6 127 87.4
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.7e-59 232.6 127 88.2
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 2.2e-59 232.3 127 87.4
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 2.8e-59 231.9 127 89.0
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 2.8e-59 231.9 127 88.2
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 4.8e-59 231.1 130 86.2
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 8.3e-59 230.3 127 87.4
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 1.1e-58 229.9 127 87.4
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 1.1e-58 229.9 127 87.4
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 1.4e-58 229.6 127 86.6
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 1.4e-58 229.6 127 88.2
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 1.8e-58 229.2 127 87.4
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 2.4e-58 228.8 125 88.8
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 2.4e-58 228.8 127 85.8
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 3.1e-58 228.4 127 86.6
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 4.1e-58 228.0 127 85.8
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 4.1e-58 228.0 125 88.8
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 4.1e-58 228.0 127 86.6
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 5.4e-58 227.6 128 85.2
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 5.4e-58 227.6 129 83.7
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 9.1e-58 226.9 125 87.2
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.6e-57 226.1 127 85.8
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.6e-57 226.1 125 88.0
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.6e-57 226.1 125 88.8
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 1.6e-57 226.1 124 89.5
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 2.0e-57 225.7 122 91.0
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 2.0e-57 225.7 122 89.3
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 2.7e-57 225.3 127 85.0
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 3.5e-57 224.9 127 85.8
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 3.5e-57 224.9 122 90.2
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.5e-57 224.9 120 91.7
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 3.5e-57 224.9 129 83.7
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 4.5e-57 224.6 127 85.0
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 4.5e-57 224.6 122 90.2
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 4.5e-57 224.6 125 87.2
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 5.9e-57 224.2 125 87.2
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 5.9e-57 224.2 122 87.7
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 7.7e-57 223.8 127 85.8
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 7.7e-57 223.8 122 89.3
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 7.7e-57 223.8 127 85.0
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 7.7e-57 223.8 122 89.3
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 7.7e-57 223.8 125 87.2
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 7.7e-57 223.8 125 86.4
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 1.3e-56 223.0 125 87.2
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 1.7e-56 222.6 125 85.6
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 2.3e-56 222.2 125 87.2
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 2.3e-56 222.2 123 85.4
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 2.9e-56 221.9 129 82.2
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.9e-56 221.9 122 87.7
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 2.9e-56 221.9 125 87.2
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 3.8e-56 221.5 123 87.0
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 3.8e-56 221.5 125 86.4
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 3.8e-56 221.5 122 86.9
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 5.0e-56 221.1 125 84.8
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 5.0e-56 221.1 122 88.5
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 6.6e-56 220.7 122 88.5
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 6.6e-56 220.7 129 81.4
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 8.6e-56 220.3 127 82.7
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 8.6e-56 220.3 125 85.6
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 8.6e-56 220.3 124 87.9
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 1.1e-55 219.9 124 86.3
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.9e-55 219.2 124 84.7
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 1.9e-55 219.2 122 87.7
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 3.3e-55 218.4 123 86.2
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 3.3e-55 218.4 128 82.8
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.2e-55 218.0 123 83.7
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 5.5e-55 217.6 122 86.9
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 9.5e-55 216.9 127 85.8
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 9.5e-55 216.9 122 85.2
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 1.2e-54 216.5 127 81.9
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 2.8e-54 215.3 125 83.2
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 4.7e-54 214.5 120 87.5
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 6.1e-54 214.2 125 82.4
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.4e-53 213.0 122 84.4
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 2.3e-53 212.2 117 88.9
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.2e-52 209.9 125 81.6
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 2.0e-52 209.1 180 63.3
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 3.4e-52 208.4 123 82.1
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 4.4e-52 208.0 124 78.2
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 5.7e-52 207.6 124 81.5
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.7e-51 206.1 139 77.0
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 1.7e-51 206.1 162 67.9
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 2.8e-51 205.3 123 80.5
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 6.3e-51 204.1 123 78.9
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 6.3e-51 204.1 123 76.4
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 8.3e-51 203.8 164 65.2
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 4.7e-46 188.0 122 74.6
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 3.1e-45 185.3 125 75.2
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.5e-44 183.0 99 89.9
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.7e-43 179.5 122 69.7
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 3.7e-43 178.3 122 68.9
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 1.1e-42 176.8 122 69.7
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.6e-41 172.9 122 67.2
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 3.5e-41 171.8 122 66.4
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 2.3e-40 169.1 106 75.5
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 7.0e-34 147.5 82 82.9
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 7.8e-33 144.1 79 87.3
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 3.9e-32 141.7 79 86.1
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 4.0e-29 131.7 107 67.3
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.0e-28 129.4 79 77.2
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 2.0e-28 129.4 121 54.5
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 6.6e-24 114.4 129 47.3
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.6e-22 109.8 84 64.3
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 1.9e-18 96.3 71 67.6
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.7e-17 92.4 135 45.9
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.1e-15 87.0 46 87.0
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.1e-15 87.0 46 87.0
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 2.5e-15 85.9 45 88.9
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.8e-14 81.6 55 72.7
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 4.8e-14 81.6 43 88.4
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 1.3e-11 73.6 114 40.4
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 2.9e-11 72.4 37 89.2
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.5e-07 60.1 42 59.5
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 9.6e-07 57.4 36 72.2


User provided reference genes

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