Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 1.8e-29 131.7 59 100.0
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 1.4e-21 105.5 54 81.5
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 1.4e-21 105.5 54 81.5
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 1.4e-21 105.5 54 81.5
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 5.3e-21 103.6 54 79.6
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 5.9e-20 100.1 54 75.9
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 1.3e-19 99.0 54 77.8
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 1.7e-19 98.6 56 66.1
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 1.7e-19 98.6 56 66.1
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 5.0e-19 97.1 56 69.6
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 5.0e-19 97.1 54 75.9
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 5.0e-19 97.1 56 67.9
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 6.5e-19 96.7 56 67.9
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 8.5e-19 96.3 53 69.8
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.1e-18 95.9 56 66.1
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 1.9e-18 95.1 55 67.3
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 2.5e-18 94.7 55 67.3
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 2.5e-18 94.7 56 67.9
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 4.2e-18 94.0 55 67.3
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 4.2e-18 94.0 55 63.6
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.2e-18 94.0 55 63.6
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 4.2e-18 94.0 55 63.6
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 4.2e-18 94.0 55 67.3
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 4.2e-18 94.0 55 67.3
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 4.2e-18 94.0 55 67.3
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 4.2e-18 94.0 56 67.9
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 5.5e-18 93.6 56 60.7
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 5.5e-18 93.6 55 69.1
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 5.5e-18 93.6 55 63.6
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 7.2e-18 93.2 55 65.5
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 9.4e-18 92.8 55 61.8
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 9.4e-18 92.8 56 66.1
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 9.4e-18 92.8 55 65.5
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 9.4e-18 92.8 56 64.3
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.2e-17 92.4 54 64.8
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.2e-17 92.4 54 64.8
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 1.2e-17 92.4 53 69.8
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 1.2e-17 92.4 56 66.1
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 1.2e-17 92.4 56 64.3
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.1e-17 91.7 55 65.5
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 2.1e-17 91.7 56 64.3
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 2.1e-17 91.7 56 66.1
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 2.1e-17 91.7 55 65.5
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 2.1e-17 91.7 55 63.6
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 2.7e-17 91.3 56 64.3
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 2.7e-17 91.3 55 65.5
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 2.7e-17 91.3 55 65.5
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 2.7e-17 91.3 56 64.3
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 3.6e-17 90.9 53 67.9
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 3.6e-17 90.9 56 58.9
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 3.6e-17 90.9 55 63.6
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 4.6e-17 90.5 55 63.6
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 6.1e-17 90.1 54 66.7
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 6.1e-17 90.1 55 65.5
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 6.1e-17 90.1 55 60.0
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 7.9e-17 89.7 55 63.6
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 7.9e-17 89.7 55 63.6
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 1.4e-16 89.0 56 64.3
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 1.4e-16 89.0 54 74.1
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 1.4e-16 89.0 56 58.9
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 1.4e-16 89.0 55 61.8
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 1.4e-16 89.0 55 63.6
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 1.4e-16 89.0 56 62.5
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.4e-16 89.0 56 60.7
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 1.8e-16 88.6 55 63.6
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 2.3e-16 88.2 55 61.8
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 2.3e-16 88.2 55 61.8
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 3.0e-16 87.8 53 66.0
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 3.0e-16 87.8 52 63.5
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 3.0e-16 87.8 55 61.8
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 3.0e-16 87.8 55 61.8
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 3.0e-16 87.8 55 61.8
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 3.9e-16 87.4 54 59.3
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 3.9e-16 87.4 57 61.4
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 5.1e-16 87.0 55 61.8
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 6.7e-16 86.7 57 63.2
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 8.8e-16 86.3 52 61.5
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 8.8e-16 86.3 57 63.2
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 8.8e-16 86.3 56 60.7
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 1.1e-15 85.9 56 60.7
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 1.5e-15 85.5 55 54.5
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 1.9e-15 85.1 54 57.4
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 3.3e-15 84.3 55 61.8
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 3.3e-15 84.3 57 61.4
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 3.3e-15 84.3 57 61.4
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 3.3e-15 84.3 57 61.4
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 3.3e-15 84.3 53 64.2
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 3.3e-15 84.3 54 63.0
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 4.3e-15 84.0 55 60.0
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 4.3e-15 84.0 52 59.6
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 5.7e-15 83.6 55 61.8
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 5.7e-15 83.6 52 59.6
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 5.7e-15 83.6 56 55.4
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 5.7e-15 83.6 52 59.6
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 5.7e-15 83.6 55 63.6
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 7.4e-15 83.2 55 63.6
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 7.4e-15 83.2 56 64.3
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 9.7e-15 82.8 57 57.9
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.3e-14 82.4 56 53.6
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 1.3e-14 82.4 56 58.9
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 1.7e-14 82.0 52 57.7
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 2.2e-14 81.6 52 55.8
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 2.2e-14 81.6 52 55.8
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 2.8e-14 81.3 56 60.7
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 2.8e-14 81.3 55 61.8
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 3.7e-14 80.9 52 55.8
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 3.7e-14 80.9 52 55.8
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 3.7e-14 80.9 52 55.8
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 6.3e-14 80.1 54 61.1
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 1.4e-13 79.0 54 55.6
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.8e-13 78.6 54 59.3
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 2.4e-13 78.2 52 65.4
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 1.5e-12 75.5 56 53.6
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 1.0e-11 72.8 54 57.4
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 2.9e-11 71.2 53 52.8
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 3.8e-11 70.9 55 52.7
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 1.1e-10 69.3 54 50.0
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 2.6e-07 58.2 48 47.9
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 4.4e-07 57.4 34 61.8


User provided reference genes

Program Settings