Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 1.5e-158 562.8 281 100.0
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 3.0e-146 521.9 281 91.8
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 3.9e-146 521.5 281 91.8
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 1.5e-145 519.6 281 91.1
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 5.6e-145 517.7 281 90.7
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 5.1e-138 494.6 281 87.9
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 4.3e-137 491.5 279 86.4
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.3e-136 490.0 280 85.4
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 8.1e-136 487.3 278 86.0
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.8e-135 486.1 279 84.2
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 9.0e-135 483.8 281 84.7
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 1.3e-133 479.9 278 83.8
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 6.4e-133 477.6 278 84.9
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 1.4e-132 476.5 281 82.9
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 1.9e-132 476.1 281 82.2
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 4.2e-132 474.9 270 85.2
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 1.6e-131 473.0 266 85.0
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 1.6e-131 473.0 269 85.9
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.6e-131 473.0 281 83.6
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 2.7e-131 472.2 284 82.4
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 2.7e-131 472.2 284 82.4
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.5e-131 471.9 266 85.3
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 7.9e-131 470.7 270 83.7
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 5.1e-130 468.0 281 80.4
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 6.7e-130 467.6 283 82.0
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 6.7e-130 467.6 269 84.4
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 6.7e-130 467.6 284 80.6
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 8.7e-130 467.2 281 81.9
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 8.7e-130 467.2 275 83.6
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 1.9e-129 466.1 280 82.1
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 1.9e-129 466.1 269 83.6
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 2.5e-129 465.7 270 83.7
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 3.3e-129 465.3 267 83.9
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 4.3e-129 464.9 280 81.4
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 5.6e-129 464.5 278 80.9
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 5.6e-129 464.5 275 81.1
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 7.4e-129 464.2 275 81.8
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 1.3e-128 463.4 270 83.0
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 1.6e-128 463.0 275 82.2
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 2.8e-128 462.2 281 80.8
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 4.8e-128 461.5 278 79.5
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 6.2e-128 461.1 276 80.8
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 8.1e-128 460.7 273 82.1
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 2.4e-127 459.1 281 82.9
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 3.1e-127 458.8 269 82.5
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 5.3e-127 458.0 274 81.4
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 5.3e-127 458.0 274 82.1
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 9.0e-127 457.2 277 81.2
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.2e-126 456.8 288 78.1
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.2e-126 456.8 273 82.1
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 1.5e-126 456.4 297 77.1
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 1.5e-126 456.4 280 80.4
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 1.5e-126 456.4 274 81.8
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 2.6e-126 455.7 282 80.5
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.7e-125 453.0 278 80.2
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 2.9e-125 452.2 275 81.1
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 3.8e-125 451.8 275 79.3
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 3.8e-125 451.8 275 80.0
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 4.9e-125 451.4 275 78.9
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 6.4e-125 451.1 275 78.9
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.1e-124 450.3 272 80.9
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 1.4e-124 449.9 275 79.6
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 1.4e-124 449.9 275 78.5
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.4e-124 449.9 274 79.6
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.4e-124 449.9 274 79.6
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 1.4e-124 449.9 267 83.1
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 5.5e-124 448.0 275 79.6
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 7.1e-124 447.6 283 77.4
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 1.6e-123 446.4 275 79.3
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 2.7e-123 445.7 277 78.3
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 4.6e-123 444.9 275 78.9
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 4.6e-123 444.9 278 79.9
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 6.0e-123 444.5 277 78.0
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 3.0e-122 442.2 267 82.4
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.6e-120 436.4 329 69.6
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 1.6e-120 436.4 265 78.9
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 3.7e-120 435.3 283 76.7
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 9.0e-119 430.6 283 76.7
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.1e-113 413.7 266 75.6
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 4.3e-113 411.8 270 74.8
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 3.7e-112 408.7 259 76.8
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.1e-111 407.1 272 72.1
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 1.8e-111 406.4 281 71.2
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.5e-110 403.3 284 69.4
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 1.5e-110 403.3 273 72.5
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.4e-108 396.7 370 57.8
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.9e-108 396.4 272 71.3
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 7.9e-107 391.0 410 54.1
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.8e-101 372.1 212 86.8
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 9.7e-97 357.5 264 67.4
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 1.4e-95 353.6 379 51.7
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.8e-93 345.5 217 80.6
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 3.2e-92 342.4 211 79.6
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 2.0e-86 323.2 199 80.9
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.5e-84 317.0 286 57.3
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 1.6e-83 313.5 170 92.9
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 6.3e-80 301.6 277 58.8
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.2e-77 293.1 203 74.9
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 3.2e-76 289.3 166 85.5
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.2e-73 280.8 189 77.2
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 9.8e-73 277.7 194 74.2
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.2e-72 276.6 194 73.7
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 8.3e-72 274.6 257 52.5
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 5.4e-71 271.9 167 82.0
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 6.5e-69 265.0 149 87.2
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 7.2e-68 261.5 159 79.2
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 7.2e-68 261.5 159 79.2
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 6.1e-67 258.5 275 53.5
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.8e-61 239.2 188 66.5
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 3.8e-61 239.2 144 77.1
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.8e-59 233.0 259 47.9
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.6e-49 199.9 127 73.2
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 9.8e-49 198.0 126 73.0
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.8e-42 177.2 108 81.5
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 4.3e-36 156.0 97 73.2
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 1.2e-30 137.9 238 35.3
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 3.0e-29 133.3 239 42.3
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 1.2e-25 121.3 89 64.0
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.1e-23 114.8 258 33.7
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 9.3e-23 111.7 102 52.9
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 3.8e-16 89.7 49 81.6
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 8.1e-11 72.0 47 74.5
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 9.9e-09 65.1 71 49.3


User provided reference genes

Program Settings