Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G262.11 Capsicum annuum HOM05D004022 ORTHO05D004090 9.1e-47 189.9 96 100.0
Sopen12g006680 Solanum pennellii HOM05D004022 ORTHO05D004090 2.3e-26 122.1 97 68.0
PGSC0003DMG400007842 Solanum tuberosum HOM05D001023 ORTHO05D000912 4.4e-25 117.9 92 69.6
Nitab4.5_0000639g0190 Nicotiana tabacum HOM05D004022 ORTHO05D004090 3.5e-22 108.2 95 66.3
Nitab4.5_0000505g0120 Nicotiana tabacum HOM05D004022 ORTHO05D004090 1.7e-21 105.9 93 62.4
Peaxi162Scf00000g00573 Petunia axillaris HOM05D004022 ORTHO05D004090 3.1e-18 95.1 104 60.6
Peaxi162Scf00035g00165 Petunia axillaris HOM05D004022 ORTHO05D004090 1.1e-10 70.1 115 46.1
Peaxi162Scf00111g00083 Petunia axillaris HOM05D004022 ORTHO05D004090 1.4e-10 69.7 113 42.5
CAN.G1003.7 Capsicum annuum HOM05D004022 ORTHO05D004090 1.8e-10 69.3 94 47.9
CAN.G904.20 Capsicum annuum HOM05D004022 ORTHO05D004090 8.9e-10 67.0 88 44.3
SalBow8G5432 Salvia bowleyana HOM05D004022 ORTHO05D004090 8.9e-10 67.0 91 47.3
Lsat_1_v5_gn_7_101361 Lactuca sativa HOM05D004022 ORTHO05D004090 1.2e-09 66.6 87 46.0
SalBow8G0217 Salvia bowleyana HOM05D004022 ORTHO05D004090 2.6e-09 65.5 91 46.2
PGSC0003DMG400027649 Solanum tuberosum HOM05D004022 ORTHO05D004090 4.4e-09 64.7 101 42.6
Lsat_1_v5_gn_7_101401 Lactuca sativa HOM05D004022 ORTHO05D004090 5.8e-09 64.3 99 41.4
Nitab4.5_0001924g0010 Nicotiana tabacum HOM05D004022 ORTHO05D004090 2.9e-08 62.0 116 41.4
Sopen07g029950 Solanum pennellii HOM05D004022 ORTHO05D004090 2.9e-08 62.0 103 41.7
Migut.M00652 Erythranthe guttata HOM05D004022 ORTHO05D004090 3.8e-08 61.6 84 45.2
Solyc07g056600.1 Solanum lycopersicum HOM05D004022 ORTHO05D004090 3.8e-08 61.6 103 39.8
ECA236G3547 Erigeron canadensis HOM05D004022 ORTHO05D004090 6.4e-08 60.8 92 42.4
Phvul.005G051400 Phaseolus vulgaris HOM05D004022 ORTHO05D004090 1.1e-07 60.1 86 41.9
Potri.001G378300 Populus trichocarpa HOM05D004022 ORTHO05D004090 1.4e-07 59.7 112 36.6
Eucgr.F01408 Eucalyptus grandis HOM05D004022 ORTHO05D004090 2.4e-07 58.9 100 40.0
CANSAT56G3333 Cannabis sativa HOM05D004022 ORTHO05D004090 3.2e-07 58.5 48 62.5
unitig_746.g26690 Utricularia gibba HOM05D004022 ORTHO05D004090 3.2e-07 58.5 86 45.3
Migut.M00651 Erythranthe guttata HOM05D004022 ORTHO05D004090 4.2e-07 58.2 88 50.0
Potri.011G095900 Populus trichocarpa HOM05D004022 ORTHO05D004090 4.2e-07 58.2 47 66.0
THA.LOC104812289 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 4.2e-07 58.2 94 37.2
COL.COLO4_31065 Corchorus olitorius HOM05D004022 ORTHO05D004090 5.4e-07 57.8 65 46.2
HanXRQChr11g0330361 Helianthus annuus HOM05D004022 ORTHO05D004090 5.4e-07 57.8 106 36.8
Lalb_Chr25g0285381 Lupinus albus HOM05D004022 ORTHO05D004090 5.4e-07 57.8 35 80.0
Medtr2g070550 Medicago truncatula HOM05D004022 ORTHO05D004090 5.4e-07 57.8 42 69.0
Glyma.15G249800 Glycine max HOM05D004022 ORTHO05D004090 7.1e-07 57.4 43 69.8
Actinidia35177 Actinidia chinensis HOM05D004022 ORTHO05D004090 9.3e-07 57.0 90 37.8
Dinv26665 Davidia involucrata HOM05D004022 ORTHO05D004090 9.3e-07 57.0 39 69.2
Glyma.08G176500 Glycine max HOM05D004022 ORTHO05D004090 9.3e-07 57.0 88 44.3
Solyc10g007580.1 Solanum lycopersicum HOM05D004022 ORTHO05D004090 9.3e-07 57.0 87 42.5
Sopen10g003500 Solanum pennellii HOM05D004022 ORTHO05D004090 9.3e-07 57.0 87 42.5
Lj3g0000459 Lotus japonicus HOM05D004022 ORTHO05D004090 1.2e-06 56.6 43 69.8
Eucgr.F01407 Eucalyptus grandis HOM05D004022 ORTHO05D004090 1.6e-06 56.2 58 50.0
Duzib268G0389 Durio zibethinus HOM05D004022 ORTHO05D004090 2.1e-06 55.8 80 41.2
HanXRQChr15g0492271 Helianthus annuus HOM05D004022 ORTHO05D004090 2.1e-06 55.8 32 87.5
Ca_03390_v3 Cicer arietinum L. HOM05D004022 ORTHO05D004090 2.7e-06 55.5 80 40.0
Migut.M00647 Erythranthe guttata HOM05D004022 ORTHO05D004090 2.7e-06 55.5 95 37.9
Medtr6g042010 Medicago truncatula HOM05D004022 ORTHO05D004090 2.7e-06 55.5 86 40.7
Thhalv10009187m.g Eutrema salsugineum HOM05D004022 ORTHO05D004090 3.5e-06 55.1 44 61.4
PGR083G0572 Punica granatum HOM05D004022 ORTHO05D004090 3.5e-06 55.1 41 68.3
BcaC03g15811 Brassica carinata HOM05D004022 ORTHO05D004090 4.6e-06 54.7 99 34.3
C02p35580 Brassica napus HOM05D004022 ORTHO05D004090 4.6e-06 54.7 99 34.3
QL04p070411 Quercus lobata HOM05D004022 ORTHO05D004090 4.6e-06 54.7 34 76.5
QL04p070436 Quercus lobata HOM05D004022 ORTHO05D004090 4.6e-06 54.7 34 76.5
Sabra16G0249100 Salix brachista HOM05D004022 ORTHO05D004090 4.6e-06 54.7 34 79.4
C05p15530 Brassica napus HOM05D004022 ORTHO05D004090 6.0e-06 54.3 91 38.5
AUR62012877 Chenopodium quinoa HOM05D004022 ORTHO05D004090 6.0e-06 54.3 100 37.0
Haze_08493 Corylus avellana HOM05D004022 ORTHO05D004090 6.0e-06 54.3 86 41.9
DCAR_021057 Daucus carota HOM05D004022 ORTHO05D004090 6.0e-06 54.3 36 72.2
Aa31LG4G2550 Aethionema arabicum HOM05D004022 ORTHO05D004090 7.8e-06 53.9 37 67.6
arahy.Tifrunner.gnm1.ann1.I20P02 Arachis hypogaea HOM05D004022 ORTHO05D004090 7.8e-06 53.9 36 69.4
arahy.Tifrunner.gnm1.ann1.NFB54Z Arachis hypogaea HOM05D004022 ORTHO05D004090 7.8e-06 53.9 36 69.4
BcaC05g25663 Brassica carinata HOM05D004022 ORTHO05D004090 7.8e-06 53.9 91 38.5
A02p22170 Brassica napus HOM05D004022 ORTHO05D004090 7.8e-06 53.9 99 33.3
BraA02t07221Z Brassica rapa HOM05D004022 ORTHO05D004090 7.8e-06 53.9 99 33.3


User provided reference genes

Program Settings