Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G231.30 Capsicum annuum HOM05D003039 ORTHO05D008410 6.7e-72 273.9 133 100.0
CAN.G175.21 Capsicum annuum HOM05D003039 ORTHO05D008410 3.8e-59 231.5 127 88.2
Nitab4.5_0010112g0050 Nicotiana tabacum HOM05D003039 ORTHO05D008410 1.9e-58 229.2 128 84.4
PGSC0003DMG400008615 Solanum tuberosum HOM05D003039 ORTHO05D008410 1.2e-57 226.5 127 85.0
Sopen04g027230 Solanum pennellii HOM05D003039 ORTHO05D008410 8.8e-56 220.3 127 84.3
Solyc04g071280.3 Solanum lycopersicum HOM05D003039 ORTHO05D008410 5.7e-55 217.6 127 83.5
Nitab4.5_0000201g0210 Nicotiana tabacum HOM05D003039 ORTHO05D008410 1.3e-54 216.5 128 82.8
Peaxi162Scf00765g00014 Petunia axillaris HOM05D003039 ORTHO05D008410 1.7e-43 179.5 125 69.6
Atru.chr4.952 Acer truncatum HOM05D003039 ORTHO05D008410 3.2e-34 148.7 121 58.7
Oeu046013.1 Olea europaea HOM05D003039 ORTHO05D008410 6.1e-33 144.4 123 58.5
MD11G1035500 Malus domestica HOM05D003039 ORTHO05D008410 4.0e-32 141.7 100 65.0
Lj1P893G46 Lonicera japonica HOM05D003039 ORTHO05D008410 5.2e-32 141.4 103 65.0
GSVIVG01012782001 Vitis vinifera HOM05D003039 ORTHO05D008410 6.8e-32 141.0 103 64.1
MD03G1030500 Malus domestica HOM05D003039 ORTHO05D008410 8.8e-32 140.6 103 63.1
QL07p027161 Quercus lobata HOM05D003039 ORTHO05D008410 8.8e-32 140.6 103 65.0
Cc10_g14690 Coffea canephora HOM05D003039 ORTHO05D008410 5.7e-31 137.9 94 64.9
Hma1.2p1_0178F.1_g078560 Hydrangea macrophylla HOM05D003039 ORTHO05D008410 5.7e-31 137.9 87 69.0
Prupe.2G028200 Prunus persica HOM05D003039 ORTHO05D008410 5.7e-31 137.9 130 54.6
vmacro21895 Vaccinium macrocarpon HOM05D003039 ORTHO05D008410 5.7e-31 137.9 93 65.6
CiPaw.16G103800 Carya illinoinensis HOM05D003039 ORTHO05D008410 7.5e-31 137.5 103 62.1
CSS0020540 Camellia sinensis var. sinensis HOM05D003039 ORTHO05D008410 1.7e-30 136.3 88 68.2
Carub.0005s2803 Capsella rubella HOM05D003039 ORTHO05D008410 2.2e-30 136.0 100 66.0
Dinv06600 Davidia involucrata HOM05D003039 ORTHO05D008410 2.2e-30 136.0 126 55.6
Duzib235G1487 Durio zibethinus HOM05D003039 ORTHO05D008410 2.8e-30 135.6 101 62.4
MELO3C005377.2 Cucumis melo HOM05D003039 ORTHO05D008410 3.7e-30 135.2 111 60.4
CsaV3_5G005760 Cucumis sativus L. HOM05D003039 ORTHO05D008410 3.7e-30 135.2 98 66.3
Rhsim02G0205300 Rhododendron simsii HOM05D003039 ORTHO05D008410 8.3e-30 134.0 95 63.2
Cfa006303 Carpinus fangiana HOM05D003039 ORTHO05D008410 1.1e-29 133.7 116 57.8
Haze_04486 Corylus avellana HOM05D003039 ORTHO05D008410 1.1e-29 133.7 92 67.4
Migut.C01014 Erythranthe guttata HOM05D003039 ORTHO05D008410 1.1e-29 133.7 93 65.6
Potri.001G130400 Populus trichocarpa HOM05D003039 ORTHO05D008410 1.1e-29 133.7 89 69.7
AUR62038751 Chenopodium quinoa HOM05D003039 ORTHO05D008410 1.8e-29 132.9 103 62.1
TWI09G0319 Tripterygium wilfordii HOM05D003039 ORTHO05D008410 1.8e-29 132.9 88 69.3
Ciclev10019823m.g Citrus clementina HOM05D003039 ORTHO05D008410 2.4e-29 132.5 98 64.3
AL5G43620 Arabidopsis lyrata HOM05D003039 ORTHO05D008410 4.1e-29 131.7 101 63.4
CSS0033889 Camellia sinensis var. sinensis HOM05D003039 ORTHO05D008410 4.1e-29 131.7 88 67.0
CANSAT78G1923 Cannabis sativa HOM05D003039 ORTHO05D008410 5.3e-29 131.3 93 63.4
Thhalv10006474m.g Eutrema salsugineum HOM05D003039 ORTHO05D008410 5.3e-29 131.3 103 64.1
Gohir.A13G116700 Gossypium hirsutum HOM05D003039 ORTHO05D008410 9.1e-29 130.6 101 61.4
Sabra01G0100800 Salix brachista HOM05D003039 ORTHO05D008410 9.1e-29 130.6 89 68.5
FAN06G2480 Fragaria x ananassa HOM05D003039 ORTHO05D008410 1.2e-28 130.2 100 60.0
Aqoxy7G02983 Aquilegia oxysepala HOM05D003039 ORTHO05D008410 1.6e-28 129.8 94 63.8
Gohir.D13G119800 Gossypium hirsutum HOM05D003039 ORTHO05D008410 1.6e-28 129.8 101 61.4
Sp5g02040 Schrenkiella parvula HOM05D003039 ORTHO05D008410 2.0e-28 129.4 95 65.3
AT3G61360 Arabidopsis thaliana HOM05D003039 ORTHO05D008410 2.7e-28 129.0 101 63.4
CARHR171700 Cardamine hirsuta HOM05D003039 ORTHO05D008410 2.7e-28 129.0 95 65.3
Gorai.013G134200 Gossypium raimondii HOM05D003039 ORTHO05D008410 3.5e-28 128.6 101 60.4
RcHm_v2.0_Chr1g0329261 Rosa chinensis HOM05D003039 ORTHO05D008410 3.5e-28 128.6 92 63.0
FvH4_7g04300 Fragaria vesca HOM05D003039 ORTHO05D008410 4.5e-28 128.3 100 59.0
Thecc.06G053600 Theobroma cacao HOM05D003039 ORTHO05D008410 4.5e-28 128.3 101 61.4
FAN10G1410 Fragaria x ananassa HOM05D003039 ORTHO05D008410 5.9e-28 127.9 100 59.0
EL10Ac5g11611 Beta vulgaris HOM05D003039 ORTHO05D008410 7.7e-28 127.5 94 61.7
SGA_v2.0_scaffold48G17965 Striga asiatica HOM05D003039 ORTHO05D008410 7.7e-28 127.5 125 48.0
Aa31LG9G15670 Aethionema arabicum HOM05D003039 ORTHO05D008410 1.0e-27 127.1 92 66.3
PGR083G2073 Punica granatum HOM05D003039 ORTHO05D008410 1.7e-27 126.3 93 62.4
HanXRQChr03g0080361 Helianthus annuus HOM05D003039 ORTHO05D008410 2.2e-27 125.9 106 54.7
COL.COLO4_07473 Corchorus olitorius HOM05D003039 ORTHO05D008410 2.9e-27 125.6 101 60.4
Ah.11g043940 Amaranthus hybridus HOM05D003039 ORTHO05D008410 3.8e-27 125.2 95 63.2
Cpa.g.sc33.110 Carica papaya HOM05D003039 ORTHO05D008410 3.8e-27 125.2 93 63.4
VMungo0464G1133 Vigna mungo HOM05D003039 ORTHO05D008410 5.0e-27 124.8 95 62.1
Lsat_1_v5_gn_9_88941 Lactuca sativa HOM05D003039 ORTHO05D008410 6.5e-27 124.4 111 53.2
Lj1g0018465 Lotus japonicus HOM05D003039 ORTHO05D008410 6.5e-27 124.4 105 56.2
C08p36220 Brassica napus HOM05D003039 ORTHO05D008410 1.9e-26 122.9 94 63.8
BolC8t51204H Brassica oleracea HOM05D003039 ORTHO05D008410 1.9e-26 122.9 94 63.8
SalBow7G2460 Salvia bowleyana HOM05D003039 ORTHO05D008410 1.9e-26 122.9 86 65.1
Eucgr.D00236 Eucalyptus grandis HOM05D003039 ORTHO05D008410 2.5e-26 122.5 92 60.9
TAR633G1464 Trochodendron aralioides HOM05D003039 ORTHO05D008410 2.5e-26 122.5 96 58.3
THA.LOC104812722 Tarenaya hassleriana HOM05D003039 ORTHO05D008410 7.2e-26 120.9 94 59.6
Sc07g0006310 Simmondsia chinensis HOM05D003039 ORTHO05D008410 9.4e-26 120.6 91 60.4
A09p53410 Brassica napus HOM05D003039 ORTHO05D008410 1.2e-25 120.2 89 66.3
BraA09t40767Z Brassica rapa HOM05D003039 ORTHO05D008410 1.6e-25 119.8 89 65.2
ECA240G2382 Erigeron canadensis HOM05D003039 ORTHO05D008410 2.1e-25 119.4 106 53.8
arahy.Tifrunner.gnm1.ann1.J1JT5X Arachis hypogaea HOM05D003039 ORTHO05D008410 2.7e-25 119.0 95 57.9
Manes.03G196200 Manihot esculenta HOM05D003039 ORTHO05D008410 2.7e-25 119.0 88 59.1
Sed0027709 Sechium edule HOM05D003039 ORTHO05D008410 2.7e-25 119.0 96 57.3
unitig_26.g10218 Utricularia gibba HOM05D003039 ORTHO05D008410 3.6e-25 118.6 98 57.1
Phvul.004G017900 Phaseolus vulgaris HOM05D003039 ORTHO05D008410 4.7e-25 118.2 95 58.9
Nn2g12485 Nelumbo nucifera HOM05D003039 ORTHO05D008410 1.0e-24 117.1 124 51.6
PSO170G3686 Papaver somniferum HOM05D003039 ORTHO05D008410 1.4e-24 116.7 105 55.2
Actinidia13220 Actinidia chinensis HOM05D003039 ORTHO05D008410 3.0e-24 115.5 96 55.2
Glyma.19G010600 Glycine max HOM05D003039 ORTHO05D008410 8.8e-24 114.0 95 55.8
VMungo1383G1437 Vigna mungo HOM05D003039 ORTHO05D008410 2.6e-23 112.5 85 62.4
DCAR_013250 Daucus carota HOM05D003039 ORTHO05D008410 1.7e-22 109.8 103 51.5
Lalb_Chr10g0093391 Lupinus albus HOM05D003039 ORTHO05D008410 2.8e-22 109.0 95 58.9
CSS0042843 Camellia sinensis var. sinensis HOM05D003039 ORTHO05D008410 1.1e-21 107.1 92 56.5
TPR.G4337 Trifolium pratense HOM05D003039 ORTHO05D008410 1.4e-21 106.7 90 52.2
Ciclev10024535m.g Citrus clementina HOM05D003039 ORTHO05D008410 3.1e-21 105.5 96 52.1
ATR0580G194 Amborella trichopoda HOM05D003039 ORTHO05D008410 5.4e-21 104.8 88 54.5
MBI14_g08138_MAGBIO Magnolia biondii HOM05D003039 ORTHO05D008410 9.1e-21 104.0 97 52.6
Ca_04108_v3 Cicer arietinum L. HOM05D003039 ORTHO05D008410 2.9e-19 99.0 89 50.6
Ca_04117_v3 Cicer arietinum L. HOM05D003039 ORTHO05D008410 2.9e-19 99.0 89 50.6
CDE07G0739 Ceratophyllum demersum HOM05D003039 ORTHO05D008410 2.8e-17 92.4 94 46.8
SEGI_15112 Sequoiadendron giganteum HOM05D003039 ORTHO05D008410 1.4e-16 90.1 129 41.1
Ciclev10027356m.g Citrus clementina HOM05D003039 ORTHO05D008410 4.0e-16 88.6 94 52.1
Dinv21315 Davidia involucrata HOM05D003039 ORTHO05D008410 2.9e-11 72.4 43 69.8
SEGI_01398 Sequoiadendron giganteum HOM05D003039 ORTHO05D009478 5.8e-07 58.2 93 38.7
SEGI_39646 Sequoiadendron giganteum HOM05D003039 ORTHO05D009478 5.8e-07 58.2 93 38.7
Aqoxy7G03329 Aquilegia oxysepala HOM05D003039 ORTHO05D009478 6.4e-06 54.7 105 35.2


User provided reference genes

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