Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G21.36 Capsicum annuum HOM05D002706 ORTHO05D012262 3.7e-36 154.5 83 100.0
Solyc01g109360.3 Solanum lycopersicum HOM05D002706 ORTHO05D003253 8.0e-15 83.6 77 66.2
Sopen01g051550 Solanum pennellii HOM05D002706 ORTHO05D003253 1.0e-14 83.2 77 66.2
PGSC0003DMG400025166 Solanum tuberosum HOM05D002706 ORTHO05D003253 1.8e-14 82.4 68 70.6
Nitab4.5_0001662g0040 Nicotiana tabacum HOM05D002706 ORTHO05D003253 2.3e-14 82.0 63 66.7
CAN.G322.108 Capsicum annuum HOM05D002706 ORTHO05D003253 5.9e-10 67.4 92 47.8
Nitab4.5_0004280g0080 Nicotiana tabacum HOM05D002706 ORTHO05D003253 1.0e-09 66.6 92 44.6
Peaxi162Scf00111g00823 Petunia axillaris HOM05D002706 ORTHO05D003253 6.5e-09 63.9 89 46.1
Nitab4.5_0002495g0060 Nicotiana tabacum HOM05D002706 ORTHO05D003253 1.1e-08 63.2 92 44.6
Lj1A816G36 Lonicera japonica HOM05D002706 ORTHO05D003253 1.9e-08 62.4 59 57.6
Hma1.2p1_0325F.1_g125930 Hydrangea macrophylla HOM05D002706 ORTHO05D003253 4.2e-08 61.2 46 67.4
Lsat_1_v5_gn_3_114641 Lactuca sativa HOM05D002706 ORTHO05D003253 7.2e-08 60.5 67 50.7
Cc05_g10340 Coffea canephora HOM05D002706 ORTHO05D003253 1.6e-07 59.3 64 53.1
HanXRQChr03g0077621 Helianthus annuus HOM05D002706 ORTHO05D003253 1.6e-07 59.3 59 57.6
Lsat_1_v5_gn_5_125020 Lactuca sativa HOM05D002706 ORTHO05D003253 2.1e-07 58.9 66 53.0
TAR375G0629 Trochodendron aralioides HOM05D002706 ORTHO05D003253 2.1e-07 58.9 70 51.4
Ciclev10005105m.g Citrus clementina HOM05D002706 ORTHO05D003253 3.6e-07 58.2 42 69.0
Manes.01G016300 Manihot esculenta HOM05D002706 ORTHO05D003253 3.6e-07 58.2 58 55.2
Actinidia18846 Actinidia chinensis HOM05D002706 ORTHO05D003253 8.0e-07 57.0 45 60.0
PGR031G1433 Punica granatum HOM05D002706 ORTHO05D003253 8.0e-07 57.0 47 68.1
ECA232G2232 Erigeron canadensis HOM05D002706 ORTHO05D003253 1.0e-06 56.6 30 83.3
HanXRQChr10g0297421 Helianthus annuus HOM05D002706 ORTHO05D003253 1.0e-06 56.6 39 69.2
vmacro12011 Vaccinium macrocarpon HOM05D002706 ORTHO05D003253 1.0e-06 56.6 62 48.4
Psat6g116280 Pisum sativum HOM05D002706 ORTHO05D003253 1.4e-06 56.2 64 45.3
Cpa.g.sc13.153 Carica papaya HOM05D002706 ORTHO05D003253 1.8e-06 55.8 84 45.2
Gohir.A05G115200 Gossypium hirsutum HOM05D002706 ORTHO05D003253 1.8e-06 55.8 42 66.7
Gohir.D04G102066 Gossypium hirsutum HOM05D002706 ORTHO05D012262 1.8e-06 55.8 42 66.7
Gohir.D05G115700 Gossypium hirsutum HOM05D002706 ORTHO05D003253 1.8e-06 55.8 42 66.7
Gorai.009G119700 Gossypium raimondii HOM05D002706 ORTHO05D003253 1.8e-06 55.8 42 66.7
Medtr1g053270 Medicago truncatula HOM05D002706 ORTHO05D003253 1.8e-06 55.8 38 71.1
Phvul.002G027700 Phaseolus vulgaris HOM05D002706 ORTHO05D003253 1.8e-06 55.8 58 51.7
AUR62014422 Chenopodium quinoa HOM05D002706 ORTHO05D003253 2.3e-06 55.5 54 51.9
Dinv26669 Davidia involucrata HOM05D002706 ORTHO05D003253 2.3e-06 55.5 70 48.6
ECA234G1375 Erigeron canadensis HOM05D002706 ORTHO05D003253 2.3e-06 55.5 30 80.0
Gorai.012G101000 Gossypium raimondii HOM05D002706 ORTHO05D003253 2.3e-06 55.5 42 66.7
Rhsim05G0015300 Rhododendron simsii HOM05D002706 ORTHO05D003253 2.3e-06 55.5 42 57.1
Sp1g24590 Schrenkiella parvula HOM05D002706 ORTHO05D003253 2.3e-06 55.5 57 56.1
vmacro11878 Vaccinium macrocarpon HOM05D002706 ORTHO05D003253 2.3e-06 55.5 45 64.4
ECA240G0438 Erigeron canadensis HOM05D002706 ORTHO05D003253 3.0e-06 55.1 30 80.0
Eucgr.A00956 Eucalyptus grandis HOM05D002706 ORTHO05D003253 3.0e-06 55.1 59 52.5
Eucgr.K00934 Eucalyptus grandis HOM05D002706 ORTHO05D003253 3.0e-06 55.1 70 45.7
Gohir.D05G323366 Gossypium hirsutum HOM05D002706 ORTHO05D003253 3.0e-06 55.1 39 69.2
TPR.G29099 Trifolium pratense HOM05D002706 ORTHO05D003253 3.0e-06 55.1 38 71.1
A08p25670 Brassica napus HOM05D002706 ORTHO05D003253 4.0e-06 54.7 58 50.0
C03p75020 Brassica napus HOM05D002706 ORTHO05D003253 4.0e-06 54.7 56 51.8
BolC3t19754H Brassica oleracea HOM05D002706 ORTHO05D003253 4.0e-06 54.7 56 51.8
BraA08t34517Z Brassica rapa HOM05D002706 ORTHO05D003253 4.0e-06 54.7 58 50.0
Carub.0001s2681 Capsella rubella HOM05D002706 ORTHO05D003253 4.0e-06 54.7 56 55.4
Duzib192G0782 Durio zibethinus HOM05D002706 ORTHO05D003253 4.0e-06 54.7 60 43.3
Gorai.011G189900 Gossypium raimondii HOM05D002706 ORTHO05D003253 4.0e-06 54.7 48 58.3
Lj5g0021295 Lotus japonicus HOM05D002706 ORTHO05D003253 4.0e-06 54.7 64 46.9
RhsimUnG0025800 Rhododendron simsii HOM05D002706 ORTHO05D003253 4.0e-06 54.7 56 55.4
RhsimUnG0028400 Rhododendron simsii HOM05D002706 ORTHO05D003253 4.0e-06 54.7 56 55.4
Sabra10G0193900 Salix brachista HOM05D002706 ORTHO05D003253 4.0e-06 54.7 77 41.6
Sed0009702 Sechium edule HOM05D002706 ORTHO05D003253 4.0e-06 54.7 47 57.4
Atru.chr12.1398 Acer truncatum HOM05D002706 ORTHO05D003253 5.2e-06 54.3 48 56.2
AT1G28350 Arabidopsis thaliana HOM05D002706 ORTHO05D003253 5.2e-06 54.3 52 53.8
arahy.Tifrunner.gnm1.ann1.0UMA9Y Arachis hypogaea HOM05D002706 ORTHO05D003253 5.2e-06 54.3 39 69.2
arahy.Tifrunner.gnm1.ann1.SSK3YK Arachis hypogaea HOM05D002706 ORTHO05D003253 5.2e-06 54.3 39 69.2
CSS0015343 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 5.2e-06 54.3 30 73.3
CSS0015711 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 5.2e-06 54.3 30 73.3
CSS0016628 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 5.2e-06 54.3 30 73.3
CSS0035683 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 5.2e-06 54.3 70 44.3
CSS0045890 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 5.2e-06 54.3 30 73.3
HanXRQChr09g0260251 Helianthus annuus HOM05D002706 ORTHO05D012262 5.2e-06 54.3 30 76.7
C07p17030 Brassica napus HOM05D002706 ORTHO05D003253 6.8e-06 53.9 59 52.5
Ca_26354_v3 Cicer arietinum L. HOM05D002706 ORTHO05D003253 6.8e-06 53.9 60 46.7
Duzib160G0388 Durio zibethinus HOM05D002706 ORTHO05D003253 6.8e-06 53.9 62 43.5
Glyma.01G176800 Glycine max HOM05D002706 ORTHO05D003253 6.8e-06 53.9 30 73.3
Glyma.11G065500 Glycine max HOM05D002706 ORTHO05D003253 6.8e-06 53.9 30 73.3
Gorai.007G209000 Gossypium raimondii HOM05D002706 ORTHO05D003253 6.8e-06 53.9 60 51.7
HanXRQChr13g0393601 Helianthus annuus HOM05D002706 ORTHO05D003253 6.8e-06 53.9 33 72.7
Lj5g0024819 Lotus japonicus HOM05D002706 ORTHO05D003253 6.8e-06 53.9 64 46.9
Lalb_Chr06g0163611 Lupinus albus HOM05D002706 ORTHO05D003253 6.8e-06 53.9 63 46.0
Medtr1g007340 Medicago truncatula HOM05D002706 ORTHO05D003253 6.8e-06 53.9 55 45.5
Atru.chr9.991 Acer truncatum HOM05D002706 ORTHO05D003253 8.8e-06 53.5 30 73.3
BcaC01g00037 Brassica carinata HOM05D002706 ORTHO05D003253 8.8e-06 53.5 56 51.8
ECA234G0431 Erigeron canadensis HOM05D002706 ORTHO05D003253 8.8e-06 53.5 30 80.0
HanXRQChr03g0077631 Helianthus annuus HOM05D002706 ORTHO05D003253 8.8e-06 53.5 75 48.0
Oeu026467.1 Olea europaea HOM05D002706 ORTHO05D003253 8.8e-06 53.5 66 50.0


User provided reference genes

Program Settings