Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 1.1e-110 403.3 200 100.0
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 6.3e-90 334.3 196 86.2
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 6.9e-89 330.9 196 85.7
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 1.2e-72 276.9 201 74.1
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 2.3e-68 262.7 206 67.5
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 2.8e-66 255.8 206 66.0
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 3.1e-65 252.3 204 66.2
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 2.9e-63 245.7 204 62.7
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 6.5e-63 244.6 212 62.7
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 1.5e-62 243.4 204 62.7
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 4.2e-62 241.9 206 61.7
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 1.2e-61 240.4 206 64.1
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 5.2e-60 235.0 201 62.2
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 6.7e-60 234.6 202 59.9
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 2.6e-59 232.6 206 61.2
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 5.7e-59 231.5 220 55.9
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 7.5e-59 231.1 207 61.8
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 7.5e-59 231.1 206 61.2
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 1.3e-58 230.3 215 59.1
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 1.3e-58 230.3 203 60.6
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 1.3e-58 230.3 168 69.6
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 1.4e-57 226.9 192 62.0
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 2.4e-57 226.1 121 95.0
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 5.3e-57 224.9 212 57.5
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 9.1e-57 224.2 210 58.1
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 9.1e-57 224.2 187 59.4
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 1.2e-56 223.8 194 61.9
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 4.5e-56 221.9 189 58.2
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 1.0e-55 220.7 206 59.7
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 6.5e-55 218.0 200 58.5
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 6.5e-55 218.0 202 57.9
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 6.5e-55 218.0 188 62.2
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 8.5e-55 217.6 206 60.2
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 8.5e-55 217.6 201 58.7
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 1.9e-54 216.5 177 63.8
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 5.5e-54 214.9 191 60.7
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 5.5e-54 214.9 202 56.9
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 7.2e-54 214.5 199 57.3
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 9.4e-54 214.2 211 57.3
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 9.4e-54 214.2 196 57.1
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 1.2e-53 213.8 200 59.5
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 1.6e-53 213.4 206 58.3
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 2.1e-53 213.0 199 59.3
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 2.7e-53 212.6 211 56.9
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 2.7e-53 212.6 191 60.7
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 3.6e-53 212.2 183 60.7
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 4.7e-53 211.8 211 55.9
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 6.1e-53 211.5 193 60.1
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 8.0e-53 211.1 180 62.2
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 8.0e-53 211.1 168 62.5
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 1.0e-52 210.7 180 61.7
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 1.0e-52 210.7 183 60.1
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 1.4e-52 210.3 197 55.3
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 1.4e-52 210.3 192 57.8
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 1.8e-52 209.9 193 60.1
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 1.8e-52 209.9 201 57.2
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 2.3e-52 209.5 200 56.0
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 2.3e-52 209.5 186 59.7
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 2.3e-52 209.5 151 70.2
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 5.2e-52 208.4 197 55.8
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 5.2e-52 208.4 209 56.5
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 5.2e-52 208.4 193 58.0
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 8.8e-52 207.6 179 60.9
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 8.8e-52 207.6 201 58.2
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 2.0e-51 206.5 189 60.3
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 2.6e-51 206.1 184 60.3
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 2.6e-51 206.1 184 60.3
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 3.4e-51 205.7 169 63.9
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 4.4e-51 205.3 198 56.1
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 7.5e-51 204.5 190 58.4
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 9.8e-51 204.1 180 59.4
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 3.7e-50 202.2 162 62.3
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 5.4e-49 198.4 193 55.4
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 9.1e-49 197.6 197 56.9
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 9.1e-49 197.6 197 56.9
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 1.6e-48 196.8 197 56.3
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 5.9e-48 194.9 134 72.4
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 4.2e-46 188.7 140 65.0
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 5.5e-46 188.3 231 47.2
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 8.0e-45 184.5 166 55.4
Atru.chr6.1589 Acer truncatum HOM05D007131 ORTHO05D009026 1.2e-43 180.6 189 54.0
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 4.4e-43 178.7 140 65.0
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 7.5e-43 177.9 169 57.4
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 2.8e-42 176.0 198 51.0
FAN27G0491 Fragaria x ananassa HOM05D007131 ORTHO05D009026 4.9e-42 175.3 228 47.8
FAN24G0325 Fragaria x ananassa HOM05D007131 ORTHO05D009026 1.1e-41 174.1 229 48.0
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 1.1e-41 174.1 138 62.3
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 1.4e-41 173.7 116 63.8
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 1.6e-40 170.2 160 56.9
AT5G48545 Arabidopsis thaliana HOM05D007131 ORTHO05D009026 1.0e-39 167.5 140 60.7
Manes.12G051500 Manihot esculenta HOM05D007131 ORTHO05D009026 1.0e-39 167.5 131 63.4
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 6.6e-39 164.9 139 56.8
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 2.8e-37 159.5 280 38.6
Gohir.D11G147600 Gossypium hirsutum HOM05D007131 ORTHO05D009026 3.6e-37 159.1 135 60.7
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 1.4e-36 157.1 143 53.8
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 2.3e-36 156.4 142 54.2
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 6.8e-36 154.8 124 65.3
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 4.9e-34 148.7 99 78.8
AUR62022148 Chenopodium quinoa HOM05D007131 ORTHO05D009026 1.6e-32 143.7 278 36.3
Lj2A1119T34 Lonicera japonica HOM05D007131 ORTHO05D009026 4.4e-27 125.6 117 61.5
Thhalv10005043m.g Eutrema salsugineum HOM05D007131 ORTHO05D009026 7.5e-27 124.8 120 52.5
arahy.Tifrunner.gnm1.ann1.YI3R6M Arachis hypogaea HOM05D007131 ORTHO05D009026 1.9e-22 110.2 166 41.6
CARHR183470 Cardamine hirsuta HOM05D007131 ORTHO05D009026 1.4e-20 104.0 104 49.0
AUR62001177 Chenopodium quinoa HOM05D007131 ORTHO05D009026 1.5e-19 100.5 208 36.1
MCO06G116 Micromonas commoda HOM05D007131 ORTHO05D009026 5.8e-19 98.6 106 44.3
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 7.5e-19 98.2 78 67.9
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 1.4e-17 94.0 66 71.2
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 7.8e-16 88.2 84 58.3
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 2.0e-11 73.6 59 57.6
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 2.6e-11 73.2 112 42.0
Cpa.g.sc8.95 Carica papaya HOM05D007131 ORTHO05D009026 5.4e-09 65.5 84 42.9
PSO675G0625 Papaver somniferum HOM05D002397 ORTHO05D002667 7.1e-09 65.1 123 30.1
PSO017G1677 Papaver somniferum HOM05D002397 ORTHO05D002667 1.2e-08 64.3 123 30.1
Carub.0001s2956 Capsella rubella HOM05D002397 ORTHO05D002667 1.5e-06 57.4 101 34.7
Sp1g26980 Schrenkiella parvula HOM05D002397 ORTHO05D002667 1.9e-06 57.0 101 33.7
AL1G49390 Arabidopsis lyrata HOM05D002397 ORTHO05D002667 3.3e-06 56.2 101 33.7
C07p14570 Brassica napus HOM05D002397 ORTHO05D002667 3.3e-06 56.2 101 32.7
BolC7t41956H Brassica oleracea HOM05D002397 ORTHO05D002667 3.3e-06 56.2 101 32.7
DCAR_001310 Daucus carota HOM05D002397 ORTHO05D009673 3.3e-06 56.2 104 32.7
Thhalv10009998m.g Eutrema salsugineum HOM05D002397 ORTHO05D002667 3.3e-06 56.2 101 33.7
HanXRQChr14g0447211 Helianthus annuus HOM05D002397 ORTHO05D002667 3.3e-06 56.2 156 28.8
TAR629G2980 Trochodendron aralioides HOM05D002397 ORTHO05D002667 3.3e-06 56.2 117 32.5
Nn7g38244 Nelumbo nucifera HOM05D002397 ORTHO05D002667 4.3e-06 55.8 128 28.1
A07p09470 Brassica napus HOM05D002397 ORTHO05D002667 5.6e-06 55.5 101 33.7
BraA07t28743Z Brassica rapa HOM05D002397 ORTHO05D002667 5.6e-06 55.5 101 33.7
PGR004G1811 Punica granatum HOM05D002397 ORTHO05D002667 7.3e-06 55.1 104 29.8
BcaB03g13805 Brassica carinata HOM05D002397 ORTHO05D002667 9.6e-06 54.7 142 29.6
CANSAT35G0509 Cannabis sativa HOM05D002397 ORTHO05D002667 9.6e-06 54.7 101 31.7


User provided reference genes

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