Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 3.4e-86 321.6 164 100.0
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.5e-78 296.2 164 90.2
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 2.0e-78 295.8 164 90.2
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 4.8e-72 274.6 190 76.8
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 8.2e-72 273.9 200 73.0
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 1.2e-67 260.0 149 87.9
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 2.0e-62 242.7 249 56.2
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 2.3e-58 229.2 164 68.3
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 8.8e-58 227.3 164 67.1
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.3e-56 223.4 162 66.0
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 9.1e-55 217.2 162 66.0
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 5.0e-53 211.5 161 62.7
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.2e-51 206.8 161 62.7
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 4.7e-51 204.9 162 61.1
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 4.7e-51 204.9 162 58.6
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 6.1e-51 204.5 162 61.1
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 6.1e-51 204.5 162 63.0
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 1.8e-50 203.0 162 61.1
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 1.8e-50 203.0 162 62.3
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 1.8e-50 203.0 160 60.0
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 3.0e-50 202.2 164 59.1
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 4.0e-50 201.8 142 67.6
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 2.0e-49 199.5 164 58.5
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 2.6e-49 199.1 161 60.2
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 7.5e-49 197.6 189 55.0
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 2.8e-48 195.7 161 57.8
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 1.4e-47 193.4 161 57.8
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 1.4e-47 193.4 163 58.3
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 1.4e-47 193.4 162 59.9
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 5.4e-47 191.4 156 61.5
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 5.4e-47 191.4 161 57.1
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 3.5e-46 188.7 161 57.8
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 1.0e-45 187.2 161 55.9
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 1.7e-45 186.4 160 53.8
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 1.7e-45 186.4 163 55.8
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 2.3e-45 186.0 162 54.9
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 2.9e-45 185.7 161 55.3
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 3.8e-45 185.3 161 57.8
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 5.0e-45 184.9 161 57.1
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 6.6e-45 184.5 164 56.1
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 6.6e-45 184.5 164 56.1
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 3.3e-44 182.2 160 51.2
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 7.3e-44 181.0 164 54.3
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 9.5e-44 180.6 161 54.7
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 9.5e-44 180.6 161 54.7
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 1.6e-43 179.9 160 52.5
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 2.1e-43 179.5 159 56.6
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 2.1e-43 179.5 160 50.6
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 2.8e-43 179.1 159 57.2
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 2.8e-43 179.1 161 55.3
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 3.6e-43 178.7 160 53.8
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 6.1e-43 177.9 160 50.0
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 6.1e-43 177.9 160 50.0
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 6.1e-43 177.9 161 52.2
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 6.1e-43 177.9 161 54.0
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 6.1e-43 177.9 161 52.2
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 8.0e-43 177.6 161 57.1
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 1.0e-42 177.2 161 54.0
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 1.8e-42 176.4 163 52.8
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 3.0e-42 175.6 160 49.4
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 3.0e-42 175.6 161 55.3
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 4.0e-42 175.3 184 50.5
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 5.2e-42 174.9 160 48.8
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 5.2e-42 174.9 184 46.2
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 8.9e-42 174.1 158 49.4
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 1.5e-41 173.3 143 60.8
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 1.5e-41 173.3 212 42.9
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 4.4e-41 171.8 160 49.4
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 5.8e-41 171.4 148 56.1
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 9.8e-41 170.6 162 50.0
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 2.2e-40 169.5 142 54.9
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 2.9e-40 169.1 143 53.8
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.9e-40 169.1 162 49.4
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 6.4e-40 167.9 139 58.3
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 1.1e-39 167.2 147 51.7
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 1.8e-39 166.4 161 50.9
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 2.4e-39 166.0 147 51.0
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 7.0e-39 164.5 184 51.1
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 2.0e-38 162.9 162 51.9
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 2.7e-38 162.5 162 50.6
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 2.7e-38 162.5 179 46.4
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 3.9e-37 158.7 161 48.4
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 5.0e-37 158.3 162 50.6
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 2.5e-36 156.0 160 49.4
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 2.5e-36 156.0 160 46.9
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 7.3e-36 154.5 164 48.2
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 1.2e-35 153.7 139 54.7
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 1.2e-35 153.7 158 47.5
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 4.7e-35 151.8 161 50.9
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 1.3e-32 143.7 162 46.9
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 2.4e-31 139.4 164 42.7
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 3.5e-30 135.6 101 62.4
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.5e-25 120.2 91 63.7
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.5e-25 120.2 91 63.7
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 2.0e-25 119.8 100 56.0
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 1.9e-20 103.2 79 60.8
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 1.1e-15 87.4 83 50.6
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.9e-15 86.7 79 51.9
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 3.2e-15 85.9 100 47.0
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 3.2e-15 85.9 100 47.0
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 4.4e-09 65.5 119 29.4
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 3.8e-08 62.4 116 28.4
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 4.2e-07 58.9 112 37.5


User provided reference genes

Program Settings