Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G125.15 Capsicum annuum HOM05D000333 ORTHO05D000190 4.5e-69 264.6 149 100.0
CAN.G1483.2 Capsicum annuum HOM05D000333 ORTHO05D000190 6.8e-33 144.4 90 83.3
CAN.G473.146 Capsicum annuum HOM05D000333 ORTHO05D000190 2.9e-31 139.0 125 68.8
CAN.G824.37 Capsicum annuum HOM05D000333 ORTHO05D000190 3.0e-28 129.0 149 65.8
Solyc00g014800.1 Solanum lycopersicum HOM05D000333 ORTHO05D000190 1.1e-22 110.5 122 62.3
Nitab4.5_0002172g0030 Nicotiana tabacum HOM05D000333 ORTHO05D000190 2.3e-20 102.8 129 52.7
PGSC0003DMG400020239 Solanum tuberosum HOM05D000333 ORTHO05D000190 2.5e-19 99.4 83 66.3
Peaxi162Scf00420g00719 Petunia axillaris HOM05D000333 ORTHO05D000190 3.3e-19 99.0 126 51.6
Nitab4.5_0000519g0160 Nicotiana tabacum HOM05D000333 ORTHO05D000190 8.1e-18 94.4 113 53.1
PGSC0003DMG400007383 Solanum tuberosum HOM05D000333 ORTHO05D000190 2.0e-16 89.7 87 63.2
PGSC0003DMG400028038 Solanum tuberosum HOM05D000333 ORTHO05D000190 2.0e-16 89.7 90 61.1
Sopen02g039080 Solanum pennellii HOM05D000333 ORTHO05D000190 7.6e-16 87.8 92 56.5
PGSC0003DMG400010912 Solanum tuberosum HOM05D000333 ORTHO05D000190 2.1e-13 79.7 76 69.7
PSO478G3144 Papaver somniferum HOM05D000333 ORTHO05D000190 1.4e-09 67.0 76 46.1
PSO017G4094 Papaver somniferum HOM05D000333 ORTHO05D000190 1.8e-09 66.6 67 50.7
SGA_v2.0_scaffold253G45160 Striga asiatica HOM05D000333 ORTHO05D000190 9.0e-09 64.3 47 66.0
Dinv33299 Davidia involucrata HOM05D000333 ORTHO05D000190 1.2e-08 63.9 39 74.4
Aqoxy3G01735 Aquilegia oxysepala HOM05D000333 ORTHO05D000190 1.5e-08 63.5 46 73.9
QL02p070381 Quercus lobata HOM05D000333 ORTHO05D000190 1.5e-08 63.5 74 50.0
Migut.F00027 Erythranthe guttata HOM05D000333 ORTHO05D000190 2.6e-08 62.8 79 48.1
Gohir.A05G335000 Gossypium hirsutum HOM05D000333 ORTHO05D000190 4.5e-08 62.0 69 52.2
Gohir.D04G073800 Gossypium hirsutum HOM05D000333 ORTHO05D000190 4.5e-08 62.0 69 52.2
Gorai.012G083200 Gossypium raimondii HOM05D000333 ORTHO05D000190 4.5e-08 62.0 69 52.2
Haze_14922 Corylus avellana HOM05D000333 ORTHO05D000190 5.8e-08 61.6 69 49.3
Manes.04G090330 Manihot esculenta HOM05D000333 ORTHO05D000190 5.8e-08 61.6 72 47.2
ATR0582G092 Amborella trichopoda HOM05D000333 ORTHO05D000190 9.9e-08 60.8 46 63.0
Actinidia37735 Actinidia chinensis HOM05D000333 ORTHO05D000190 1.3e-07 60.5 48 66.7
CiPaw.03G003900 Carya illinoinensis HOM05D000333 ORTHO05D000190 1.3e-07 60.5 69 49.3
Dinv25629 Davidia involucrata HOM05D000333 ORTHO05D000190 1.3e-07 60.5 44 65.9
Potri.001G324600 Populus trichocarpa HOM05D000333 ORTHO05D000190 1.7e-07 60.1 113 38.9
Sed0026068 Sechium edule HOM05D000333 ORTHO05D000190 1.7e-07 60.1 73 49.3
ClCG05G013960 Citrullus lanatus HOM05D000333 ORTHO05D000190 2.9e-07 59.3 69 46.4
DCAR_014481 Daucus carota HOM05D000333 ORTHO05D000190 3.8e-07 58.9 42 66.7
Duzib187G0104 Durio zibethinus HOM05D000333 ORTHO05D000190 3.8e-07 58.9 85 44.7
Cc04_g04950 Coffea canephora HOM05D000333 ORTHO05D000190 4.9e-07 58.5 64 42.2
Sabra17G0056400 Salix brachista HOM05D000333 ORTHO05D000190 6.4e-07 58.2 98 37.8
CSS0035342 Camellia sinensis var. sinensis HOM05D000333 ORTHO05D000190 8.4e-07 57.8 58 55.2
CAN.G282.114 Capsicum annuum HOM05D000333 ORTHO05D000190 8.4e-07 57.8 68 45.6
CDE02G2338 Ceratophyllum demersum HOM05D000333 ORTHO05D000190 8.4e-07 57.8 64 48.4
CDE06G0163 Ceratophyllum demersum HOM05D000333 ORTHO05D000190 8.4e-07 57.8 64 50.0
Oeu035367.1 Olea europaea HOM05D000333 ORTHO05D000190 8.4e-07 57.8 32 78.1
PGSC0003DMG400022776 Solanum tuberosum HOM05D000333 ORTHO05D000190 8.4e-07 57.8 43 62.8
CSS0018051 Camellia sinensis var. sinensis HOM05D003047 ORTHO05D000190 1.4e-06 57.0 55 60.0
Ciclev10003844m.g Citrus clementina HOM05D000333 ORTHO05D000190 1.4e-06 57.0 44 61.4
CsaV3_3G026470 Cucumis sativus L. HOM05D000333 ORTHO05D000190 1.4e-06 57.0 80 43.8
Duzib147G1404 Durio zibethinus HOM05D000333 ORTHO05D000190 1.4e-06 57.0 69 49.3
Sopen01g001230 Solanum pennellii HOM05D000333 ORTHO05D000190 1.4e-06 57.0 42 61.9
PGSC0003DMG400022777 Solanum tuberosum HOM05D000333 ORTHO05D000190 1.4e-06 57.0 42 61.9
Thecc.04G043200 Theobroma cacao HOM05D000333 ORTHO05D000190 1.4e-06 57.0 66 50.0
COL.COLO4_13322 Corchorus olitorius HOM05D000333 ORTHO05D000190 1.9e-06 56.6 43 62.8
Lalb_Chr12g0200091 Lupinus albus HOM05D000333 ORTHO05D000190 1.9e-06 56.6 95 42.1
MBI15_g16943_MAGBIO Magnolia biondii HOM05D000333 ORTHO05D000190 1.9e-06 56.6 34 70.6
Cpa.g.sc70.98 Carica papaya HOM05D000333 ORTHO05D000190 2.4e-06 56.2 67 47.8
Cfa015060 Carpinus fangiana HOM05D000333 ORTHO05D000190 2.4e-06 56.2 79 45.6
BcaC06g30727 Brassica carinata HOM05D000333 ORTHO05D000190 4.2e-06 55.5 37 67.6
A06p38830 Brassica napus HOM05D000333 ORTHO05D000190 4.2e-06 55.5 37 67.6
C07p39490 Brassica napus HOM05D000333 ORTHO05D000190 4.2e-06 55.5 37 67.6
BraA06t26799Z Brassica rapa HOM05D000333 ORTHO05D000190 4.2e-06 55.5 37 67.6
Os07g0593000 Oryza sativa ssp. japonica HOM05D000333 ORTHO05D000190 4.2e-06 55.5 42 61.9
Peaxi162Scf00193g00132 Petunia axillaris HOM05D000333 ORTHO05D000190 4.2e-06 55.5 42 59.5
QL07p013410 Quercus lobata HOM05D000333 ORTHO05D000190 4.2e-06 55.5 70 41.4
Sabra16G0207100 Salix brachista HOM05D000333 ORTHO05D000190 4.2e-06 55.5 76 48.7
THA.LOC104821136 Tarenaya hassleriana HOM05D000333 ORTHO05D000190 4.2e-06 55.5 82 46.3
Ca_08108_v3 Cicer arietinum L. HOM05D000333 ORTHO05D000190 5.5e-06 55.1 75 41.3
Haze_10831 Corylus avellana HOM05D000333 ORTHO05D000190 5.5e-06 55.1 79 45.6
Manes.12G042600 Manihot esculenta HOM05D000333 ORTHO05D000190 5.5e-06 55.1 37 70.3
Nn3g16337 Nelumbo nucifera HOM05D000333 ORTHO05D000190 5.5e-06 55.1 46 63.0
Nitab4.5_0000846g0050 Nicotiana tabacum HOM05D001336 ORTHO05D001211 5.5e-06 55.1 103 35.0
PGR083G0308 Punica granatum HOM05D000333 ORTHO05D000190 5.5e-06 55.1 42 61.9
Rhsim08G0040200 Rhododendron simsii HOM05D000333 ORTHO05D000190 5.5e-06 55.1 75 42.7
Sopen01g001220 Solanum pennellii HOM05D000333 ORTHO05D000190 5.5e-06 55.1 43 58.1
THA.LOC104817797 Tarenaya hassleriana HOM05D000333 ORTHO05D000190 5.5e-06 55.1 78 39.7
AT5G14010 Arabidopsis thaliana HOM05D000333 ORTHO05D000190 7.1e-06 54.7 69 46.4
CANSAT64G0372 Cannabis sativa HOM05D000333 ORTHO05D000190 7.1e-06 54.7 109 35.8
HanXRQChr15g0486771 Helianthus annuus HOM05D000333 ORTHO05D000190 7.1e-06 54.7 34 70.6
Manes.13G044000 Manihot esculenta HOM05D000333 ORTHO05D000190 7.1e-06 54.7 37 67.6
Aa31sc98G60 Aethionema arabicum HOM05D000333 ORTHO05D000190 9.3e-06 54.3 48 52.1
Ah.02g119390 Amaranthus hybridus HOM05D000333 ORTHO05D000190 9.3e-06 54.3 69 44.9
BcaC06g30748 Brassica carinata HOM05D000333 ORTHO05D000190 9.3e-06 54.3 37 64.9
C09p63110 Brassica napus HOM05D000333 ORTHO05D000190 9.3e-06 54.3 69 47.8
BolC7t44468H Brassica oleracea HOM05D000333 ORTHO05D000190 9.3e-06 54.3 37 64.9
BolC9t59148H Brassica oleracea HOM05D000333 ORTHO05D000190 9.3e-06 54.3 69 47.8
Cfa007186 Carpinus fangiana HOM05D000333 ORTHO05D000190 9.3e-06 54.3 75 44.0
AUR62030826 Chenopodium quinoa HOM05D000333 ORTHO05D001954 9.3e-06 54.3 77 41.6
Gohir.D13G112750 Gossypium hirsutum HOM05D000333 ORTHO05D000190 9.3e-06 54.3 48 56.2
Gorai.013G126700 Gossypium raimondii HOM05D000333 ORTHO05D000190 9.3e-06 54.3 48 56.2
Peaxi162Scf00052g00092 Petunia axillaris HOM05D000333 ORTHO05D000190 9.3e-06 54.3 48 52.1


User provided reference genes

Program Settings