Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G11941.1 Capsicum annuum HOM05D000570 ORTHO05D022145 4.0e-34 147.5 74 100.0
CAN.G1122.1 Capsicum annuum HOM05D002566 ORTHO05D022145 6.9e-18 93.6 50 96.0
Peaxi162Scf00612g00411 Petunia axillaris HOM05D000570 ORTHO05D002740 1.9e-12 75.5 53 73.6
Hund21262 Selenicereus undatus HOM05D000570 ORTHO05D002740 4.3e-12 74.3 61 63.9
EL10Ac8g20640 Beta vulgaris HOM05D000570 ORTHO05D002740 1.8e-10 68.9 61 55.7
Actinidia01920 Actinidia chinensis HOM05D000570 ORTHO05D002740 4.0e-10 67.8 47 70.2
MSTRG.15898 Avicennia marina HOM05D000570 ORTHO05D002740 4.0e-10 67.8 48 68.8
Zm00001eb296610 Zea mays HOM05D000570 ORTHO05D002740 6.9e-10 67.0 61 54.1
ECA248G3675 Erigeron canadensis HOM05D000570 ORTHO05D002740 9.0e-10 66.6 50 64.0
CANSAT64G1633 Cannabis sativa HOM05D000570 ORTHO05D002740 1.5e-09 65.9 53 62.3
vmacro22788 Vaccinium macrocarpon HOM05D000570 ORTHO05D002740 1.5e-09 65.9 49 65.3
Sabra19G0114600 Salix brachista HOM05D000570 ORTHO05D002740 2.0e-09 65.5 49 67.3
Cc00_g11520 Coffea canephora HOM05D000570 ORTHO05D002740 3.4e-09 64.7 47 68.1
Lsat_1_v5_gn_1_125481 Lactuca sativa HOM05D000570 ORTHO05D002740 3.4e-09 64.7 49 65.3
ECA236G2621 Erigeron canadensis HOM05D000570 ORTHO05D002740 7.6e-09 63.5 46 63.0
Hma1.2p1_0191F.1_g083420 Hydrangea macrophylla HOM05D000570 ORTHO05D002740 7.6e-09 63.5 50 60.0
Sabra13G0116600 Salix brachista HOM05D000570 ORTHO05D002740 7.6e-09 63.5 51 64.7
Actinidia05597 Actinidia chinensis HOM05D000570 ORTHO05D002740 1.0e-08 63.2 47 63.8
FvH4_6g44950 Fragaria vesca HOM05D000570 ORTHO05D002740 1.3e-08 62.8 53 62.3
FAN02G0613 Fragaria x ananassa HOM05D000570 ORTHO05D002740 1.3e-08 62.8 53 62.3
FAN05G2120 Fragaria x ananassa HOM05D000570 ORTHO05D002740 1.3e-08 62.8 53 62.3
FAN09G3013 Fragaria x ananassa HOM05D002479 ORTHO05D002675 1.3e-08 62.8 53 62.3
FAN14G1217 Fragaria x ananassa HOM05D000570 ORTHO05D002740 1.3e-08 62.8 53 62.3
Phvul.011G112700 Phaseolus vulgaris HOM05D000570 ORTHO05D002740 1.3e-08 62.8 51 60.8
Prupe.3G233500 Prunus persica HOM05D000570 ORTHO05D002740 1.3e-08 62.8 49 61.2
Duzib248G0266 Durio zibethinus HOM05D000570 ORTHO05D002740 1.7e-08 62.4 60 53.3
MBI18_g13204_MAGBIO Magnolia biondii HOM05D000570 ORTHO05D002740 2.9e-08 61.6 49 63.3
CAN.G1705.9 Capsicum annuum HOM05D000570 ORTHO05D002740 3.8e-08 61.2 45 71.1
DCAR_009736 Daucus carota HOM05D000570 ORTHO05D002740 4.9e-08 60.8 52 59.6
Manes.13G150000 Manihot esculenta HOM05D000570 ORTHO05D002740 4.9e-08 60.8 53 60.4
Medtr4g046113 Medicago truncatula HOM05D000570 ORTHO05D002740 4.9e-08 60.8 50 62.0
Sc17g0006440 Simmondsia chinensis HOM05D000570 ORTHO05D002740 4.9e-08 60.8 48 62.5
PGSC0003DMG400007862 Solanum tuberosum HOM05D000570 ORTHO05D002740 6.5e-08 60.5 51 62.7
Gohir.D02G182000 Gossypium hirsutum HOM05D000570 ORTHO05D002740 8.4e-08 60.1 53 56.6
Gorai.005G204500 Gossypium raimondii HOM05D000570 ORTHO05D002740 8.4e-08 60.1 53 56.6
PSO210G3778 Papaver somniferum HOM05D000570 ORTHO05D002740 1.1e-07 59.7 51 56.9
Solyc12g010740.3 Solanum lycopersicum HOM05D000570 ORTHO05D002740 1.1e-07 59.7 52 59.6
Atru.chr10.1972 Acer truncatum HOM05D000570 ORTHO05D002740 1.4e-07 59.3 49 59.2
Cc05_g06630 Coffea canephora HOM05D000570 ORTHO05D002740 1.4e-07 59.3 50 62.0
TAR627G0977 Trochodendron aralioides HOM05D000570 ORTHO05D002740 1.4e-07 59.3 50 60.0
CDE11G1180 Ceratophyllum demersum HOM05D000570 ORTHO05D002740 1.9e-07 58.9 49 59.2
AUR62014754 Chenopodium quinoa HOM05D000570 ORTHO05D002740 1.9e-07 58.9 47 63.8
AUR62016931 Chenopodium quinoa HOM05D000570 ORTHO05D002740 1.9e-07 58.9 47 63.8
Ca_00296_v3 Cicer arietinum L. HOM05D000570 ORTHO05D002740 1.9e-07 58.9 45 66.7
Ca_10479_v3 Cicer arietinum L. HOM05D000570 ORTHO05D002740 1.9e-07 58.9 45 66.7
PGR042G2286 Punica granatum HOM05D000570 ORTHO05D002740 1.9e-07 58.9 63 49.2
Sopen12g005260 Solanum pennellii HOM05D000570 ORTHO05D002740 1.9e-07 58.9 52 59.6
TPR.G36738 Trifolium pratense HOM05D000570 ORTHO05D002740 1.9e-07 58.9 45 66.7
TPR.G446 Trifolium pratense HOM05D000570 ORTHO05D022145 1.9e-07 58.9 50 60.0
Gohir.A03G158900 Gossypium hirsutum HOM05D000570 ORTHO05D002740 2.5e-07 58.5 53 54.7
Aqoxy1G02651 Aquilegia oxysepala HOM05D000570 ORTHO05D002740 3.2e-07 58.2 46 60.9
Hma1.2p1_0875F.1_g231550 Hydrangea macrophylla HOM05D000570 ORTHO05D002740 3.2e-07 58.2 52 59.6
Nitab4.5_0001820g0040 Nicotiana tabacum HOM05D000570 ORTHO05D002740 3.2e-07 58.2 45 66.7
Oeu031643.1 Olea europaea HOM05D000570 ORTHO05D002740 3.2e-07 58.2 61 49.2
arahy.Tifrunner.gnm1.ann1.DS0JBP Arachis hypogaea HOM05D000570 ORTHO05D002740 4.2e-07 57.8 50 60.0
VMungo1127G1068 Vigna mungo HOM05D000570 ORTHO05D002740 4.2e-07 57.8 50 58.0
arahy.Tifrunner.gnm1.ann1.018Q39 Arachis hypogaea HOM05D000570 ORTHO05D002740 5.5e-07 57.4 49 61.2
Glyma.13G300000 Glycine max HOM05D000570 ORTHO05D002740 5.5e-07 57.4 48 58.3
PGSC0003DMG400022425 Solanum tuberosum HOM05D000570 ORTHO05D002740 5.5e-07 57.4 62 53.2
Atru.chr6.3045 Acer truncatum HOM05D000570 ORTHO05D002740 7.1e-07 57.0 48 60.4
CAN.G1881.2 Capsicum annuum HOM05D000570 ORTHO05D002740 7.1e-07 57.0 53 60.4
Lalb_Chr01g0005371 Lupinus albus HOM05D000570 ORTHO05D002740 7.1e-07 57.0 48 62.5
Sp3g34100 Schrenkiella parvula HOM05D000570 ORTHO05D002740 7.1e-07 57.0 59 52.5
Solyc02g078780.3 Solanum lycopersicum HOM05D000570 ORTHO05D002740 7.1e-07 57.0 62 51.6
Sopen02g023600 Solanum pennellii HOM05D000570 ORTHO05D002740 7.1e-07 57.0 62 51.6
TAR624G0401 Trochodendron aralioides HOM05D000570 ORTHO05D002740 7.1e-07 57.0 48 60.4
BcaC01g06681 Brassica carinata HOM05D000570 ORTHO05D002740 9.3e-07 56.6 49 55.1
C03p36790 Brassica napus HOM05D000570 ORTHO05D002740 9.3e-07 56.6 49 55.1
BolC3t15993H Brassica oleracea HOM05D000570 ORTHO05D002740 9.3e-07 56.6 49 55.1
CSS0003593 Camellia sinensis var. sinensis HOM05D000570 ORTHO05D022145 9.3e-07 56.6 62 51.6
Lalb_Chr18g0059841 Lupinus albus HOM05D000570 ORTHO05D002740 9.3e-07 56.6 45 64.4
Lalb_Chr19g0135411 Lupinus albus HOM05D000570 ORTHO05D002740 9.3e-07 56.6 49 59.2
HanXRQChr10g0277631 Helianthus annuus HOM05D000570 ORTHO05D002740 1.2e-06 56.2 49 59.2
Manes.17G041100 Manihot esculenta HOM05D000570 ORTHO05D002740 1.2e-06 56.2 47 61.7
DCAR_004125 Daucus carota HOM05D000570 ORTHO05D002740 1.6e-06 55.8 45 60.0
Medtr2g012670 Medicago truncatula HOM05D000570 ORTHO05D002740 1.6e-06 55.8 45 64.4
Phvul.005G106800 Phaseolus vulgaris HOM05D000570 ORTHO05D002740 1.6e-06 55.8 47 59.6
HPP92_012346 Vanilla planifolia HOM05D000570 ORTHO05D002740 1.6e-06 55.8 52 53.8
Aa31LG5G2830 Aethionema arabicum HOM05D000570 ORTHO05D002740 2.1e-06 55.5 50 56.0
arahy.Tifrunner.gnm1.ann1.8JE7UV Arachis hypogaea HOM05D000570 ORTHO05D002740 2.1e-06 55.5 45 60.0
arahy.Tifrunner.gnm1.ann1.A281AA Arachis hypogaea HOM05D000570 ORTHO05D002740 2.1e-06 55.5 44 65.9
BcaB01g02530 Brassica carinata HOM05D000570 ORTHO05D002740 2.1e-06 55.5 51 52.9
FAN25G1436 Fragaria x ananassa HOM05D000570 ORTHO05D002740 2.1e-06 55.5 62 46.8
Glyma.12G108400 Glycine max HOM05D000570 ORTHO05D002740 2.1e-06 55.5 51 54.9
Lj3g0004019 Lotus japonicus HOM05D000570 ORTHO05D002740 2.1e-06 55.5 49 57.1
A03p30460 Brassica napus HOM05D000570 ORTHO05D002740 2.7e-06 55.1 49 53.1
BraA03t12227Z Brassica rapa HOM05D000570 ORTHO05D002740 2.7e-06 55.1 49 53.1
ECA233G4738 Erigeron canadensis HOM05D000570 ORTHO05D002740 2.7e-06 55.1 50 60.0
Glyma.06G296800 Glycine max HOM05D000570 ORTHO05D002740 2.7e-06 55.1 51 54.9
arahy.Tifrunner.gnm1.ann1.SMN61J Arachis hypogaea HOM05D000570 ORTHO05D002740 3.5e-06 54.7 45 60.0
ClCG00G003120 Citrullus lanatus HOM05D000570 ORTHO05D002740 3.5e-06 54.7 45 60.0
Haze_13107 Corylus avellana HOM05D000570 ORTHO05D002740 3.5e-06 54.7 63 42.9
CsaV3_6G049870 Cucumis sativus L. HOM05D000570 ORTHO05D002740 3.5e-06 54.7 45 60.0
Glyma.13G244200 Glycine max HOM05D000570 ORTHO05D002740 3.5e-06 54.7 45 64.4
Os02g0176100 Oryza sativa ssp. japonica HOM05D000570 ORTHO05D002740 3.5e-06 54.7 50 54.0
CARHR251780 Cardamine hirsuta HOM05D000570 ORTHO05D002740 4.6e-06 54.3 50 56.0
Cfa000384 Carpinus fangiana HOM05D000570 ORTHO05D002740 4.6e-06 54.3 46 56.5
Psat1g208360 Pisum sativum HOM05D000570 ORTHO05D002740 4.6e-06 54.3 43 65.1
VMungo0540G0547 Vigna mungo HOM05D000570 ORTHO05D002740 4.6e-06 54.3 45 62.2
BcaB01g01951 Brassica carinata HOM05D000570 ORTHO05D002740 6.0e-06 53.9 49 55.1
BcaC04g23975 Brassica carinata HOM05D000570 ORTHO05D002740 6.0e-06 53.9 49 55.1
A09p02730 Brassica napus HOM05D000570 ORTHO05D002740 6.0e-06 53.9 49 55.1
C09p02770 Brassica napus HOM05D000570 ORTHO05D002740 6.0e-06 53.9 49 55.1
BolC9t53205H Brassica oleracea HOM05D000570 ORTHO05D002740 6.0e-06 53.9 49 55.1
BraA09t35915Z Brassica rapa HOM05D000570 ORTHO05D002740 6.0e-06 53.9 49 55.1
Cfa014562 Carpinus fangiana HOM05D000570 ORTHO05D002740 7.9e-06 53.5 53 49.1
MD17G1081400 Malus domestica HOM05D000570 ORTHO05D002740 7.9e-06 53.5 47 57.4
Potri.011G045600 Populus trichocarpa HOM05D000570 ORTHO05D002740 7.9e-06 53.5 49 55.1


User provided reference genes

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