Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 1.1e-135 486.5 223 100.0
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.1e-119 433.3 227 86.8
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 3.0e-117 425.2 223 86.1
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 4.8e-115 417.9 224 84.8
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.1e-111 406.8 238 78.6
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 1.1e-103 380.2 222 77.0
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 7.4e-100 367.5 223 75.3
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 9.7e-100 367.1 222 75.2
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 1.2e-97 360.1 220 74.1
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 3.5e-97 358.6 221 72.4
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 3.5e-97 358.6 189 85.7
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 7.7e-97 357.5 219 72.6
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 7.7e-97 357.5 223 72.2
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 1.3e-96 356.7 222 74.3
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.7e-96 356.3 222 73.0
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 1.7e-96 356.3 217 73.7
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 1.7e-96 356.3 221 73.8
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 6.5e-96 354.4 225 72.4
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.1e-95 353.6 221 70.1
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 3.2e-95 352.1 221 73.3
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 7.2e-95 350.9 221 71.5
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 2.1e-94 349.4 220 70.9
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 2.7e-94 349.0 229 71.6
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 3.6e-94 348.6 222 72.1
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 3.6e-94 348.6 225 69.8
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 6.1e-94 347.8 218 71.1
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 6.1e-94 347.8 218 71.1
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 8.0e-94 347.4 222 72.5
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.0e-93 347.1 224 71.4
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.4e-93 346.7 225 71.6
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 1.8e-93 346.3 219 72.6
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.1e-92 343.6 217 69.1
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.1e-92 343.6 222 71.2
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.6e-92 342.4 221 70.6
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 3.3e-92 342.0 221 71.0
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 4.4e-92 341.7 217 70.0
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 4.4e-92 341.7 215 70.2
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 7.5e-92 340.9 219 70.3
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 7.5e-92 340.9 219 70.3
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 9.7e-92 340.5 217 69.6
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 9.7e-92 340.5 225 69.8
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 1.7e-91 339.7 219 70.3
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 1.7e-91 339.7 225 68.4
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 2.2e-91 339.3 224 70.5
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 2.2e-91 339.3 218 69.3
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 2.8e-91 339.0 225 70.7
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 8.2e-91 337.4 221 68.3
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.1e-90 337.0 219 68.5
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 1.1e-90 337.0 218 68.8
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.8e-90 336.3 224 68.3
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.8e-90 336.3 224 69.2
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 3.1e-90 335.5 218 69.3
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 1.6e-89 333.2 218 70.2
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 2.0e-89 332.8 224 66.1
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 2.0e-89 332.8 218 68.8
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.7e-89 332.4 264 59.1
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 1.0e-88 330.5 224 67.9
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 1.7e-88 329.7 292 55.8
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 2.2e-88 329.3 230 65.2
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 2.9e-88 328.9 222 69.8
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 3.8e-88 328.6 221 66.1
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 6.5e-88 327.8 225 68.4
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 6.5e-88 327.8 225 67.6
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 8.5e-88 327.4 219 67.6
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 8.5e-88 327.4 219 67.6
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 2.5e-87 325.9 221 67.9
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 3.2e-87 325.5 227 66.5
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.7e-86 322.4 224 67.0
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 4.7e-86 321.6 224 66.5
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 4.7e-86 321.6 225 68.0
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 4.7e-86 321.6 217 65.9
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.0e-84 316.2 241 63.5
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 3.4e-84 315.5 223 65.0
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.1e-82 310.5 187 73.3
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.4e-82 310.1 217 65.0
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 9.1e-82 307.4 222 65.3
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.2e-81 307.0 196 70.9
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.5e-81 305.4 233 61.8
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 5.9e-81 304.7 266 57.1
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.7e-80 303.1 195 68.7
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 2.5e-79 299.3 226 63.3
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 7.2e-79 297.7 228 58.3
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.7e-78 295.0 191 71.2
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 6.1e-78 294.7 194 69.6
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 6.1e-78 294.7 196 69.4
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 1.4e-77 293.5 198 70.7
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 1.8e-77 293.1 219 60.3
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 1.2e-76 290.4 189 67.7
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 4.4e-76 288.5 187 72.2
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 9.8e-76 287.3 203 65.5
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 8.3e-75 284.3 218 61.0
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 3.1e-74 282.3 189 68.8
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.2e-73 280.4 190 66.3
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 2.7e-73 279.3 185 66.5
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 3.5e-73 278.9 223 59.2
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 3.5e-73 278.9 223 59.2
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 1.7e-72 276.6 185 67.6
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 2.3e-72 276.2 190 66.8
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 6.6e-72 274.6 185 66.5
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.1e-71 273.9 199 63.8
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 8.0e-70 267.7 194 67.5
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 8.0e-70 267.7 194 67.5
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 2.3e-69 266.2 186 64.0
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.0e-69 265.8 221 59.7
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 1.2e-68 263.8 190 61.6
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 4.4e-68 261.9 134 85.1
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 9.8e-68 260.8 198 64.6
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.2e-65 253.8 219 53.9
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 2.1e-62 243.0 220 57.7
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 5.8e-60 235.0 200 53.5
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 5.8e-60 235.0 198 56.1
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.1e-53 214.2 217 47.0
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 7.5e-52 208.0 141 68.1
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 9.8e-52 207.6 163 62.0
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 6.2e-38 161.8 85 77.6
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 5.8e-36 155.2 75 81.3
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 6.4e-19 98.6 199 34.7
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 5.7e-07 58.9 62 41.9


User provided reference genes

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