Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 6.4e-230 800.4 414 100.0
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 4.3e-194 681.4 408 86.3
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 9.6e-194 680.2 408 86.3
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 8.1e-193 677.2 408 86.0
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 5.7e-186 654.4 404 83.4
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 2.1e-185 652.5 404 83.7
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 2.1e-180 636.0 405 80.7
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 5.2e-147 525.0 404 67.3
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 1.6e-143 513.5 398 66.8
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 1.0e-142 510.8 403 67.0
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.0e-139 500.7 399 65.4
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.3e-139 499.6 406 64.5
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 2.6e-138 496.1 400 64.8
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 2.7e-135 486.1 406 63.5
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 1.7e-134 483.4 408 63.2
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 2.5e-133 479.6 405 64.2
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 2.3e-131 473.0 408 61.5
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 5.2e-131 471.9 384 64.1
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 8.9e-131 471.1 419 60.4
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 5.7e-130 468.4 395 62.0
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 7.5e-130 468.0 406 59.9
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 1.7e-129 466.8 409 59.7
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 1.7e-129 466.8 405 60.2
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 2.2e-129 466.5 426 60.6
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 2.2e-129 466.5 409 61.1
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 4.9e-129 465.3 419 59.4
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 2.4e-128 463.0 414 58.9
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 7.0e-128 461.5 405 61.2
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.2e-127 460.7 411 60.6
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.6e-127 458.8 412 60.7
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 2.3e-126 456.4 412 60.7
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.3e-126 456.4 401 61.3
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 3.9e-126 455.7 416 60.8
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.0e-126 455.3 412 61.4
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 8.6e-126 454.5 386 62.7
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 2.5e-125 453.0 411 61.1
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.6e-125 451.8 412 60.2
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.6e-124 450.3 402 60.2
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 8.0e-124 448.0 404 57.9
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 1.4e-123 447.2 382 62.0
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 2.3e-123 446.4 404 56.4
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 5.2e-123 445.3 375 60.5
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 8.9e-123 444.5 410 58.0
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 2.0e-122 443.4 388 61.6
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 3.4e-122 442.6 402 59.7
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 1.3e-121 440.7 404 56.7
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.3e-121 440.7 382 60.5
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 1.7e-121 440.3 405 60.5
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 2.9e-121 439.5 400 59.8
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 8.3e-121 438.0 405 58.8
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 8.3e-121 438.0 417 57.1
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.1e-120 437.6 407 58.5
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 2.0e-119 433.3 402 61.2
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 2.0e-119 433.3 396 56.8
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 7.8e-119 431.4 405 57.8
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 8.6e-118 427.9 411 55.2
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 7.3e-117 424.9 400 58.8
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 1.4e-115 420.6 406 56.2
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 5.2e-115 418.7 409 55.0
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 2.6e-114 416.4 340 63.8
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.9e-112 410.2 418 51.0
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.9e-112 410.2 418 51.0
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 3.2e-112 409.5 419 51.1
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 4.1e-112 409.1 400 52.5
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.6e-111 407.1 400 52.0
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 1.0e-110 404.4 395 52.7
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 8.6e-110 401.4 395 52.2
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 8.6e-110 401.4 421 50.6
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 2.5e-109 399.8 419 50.1
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 2.5e-109 399.8 346 61.3
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 4.3e-109 399.1 419 51.6
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 9.5e-109 397.9 402 50.7
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 8.1e-108 394.8 417 50.1
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 5.2e-107 392.1 384 54.7
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 5.8e-106 388.7 413 51.3
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.3e-102 376.7 326 59.2
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.8e-91 340.5 334 54.2
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 2.4e-91 340.1 337 52.5
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.4e-91 340.1 418 45.0
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.2e-90 337.8 418 44.7
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 3.5e-87 326.2 392 46.2
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 6.2e-84 315.5 301 53.5
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 3.1e-83 313.2 389 43.2
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 1.2e-82 311.2 295 56.6
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.1e-80 304.7 375 46.1
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 2.4e-80 303.5 268 59.3
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.0e-78 298.1 355 47.0
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 1.5e-74 284.3 411 42.3
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 2.4e-67 260.4 323 45.5
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 9.3e-64 248.4 215 58.6
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 6.9e-59 232.3 394 36.8
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 2.0e-58 230.7 398 36.9
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 3.4e-58 229.9 307 42.3
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 2.7e-55 220.3 135 82.2
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 4.4e-45 186.4 594 26.9
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 8.2e-44 182.2 223 43.9
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 6.1e-39 166.0 248 37.9
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 1.8e-35 154.5 116 69.0
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.5e-32 144.1 79 91.1
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 3.6e-31 140.2 125 62.4
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 1.0e-30 138.7 134 53.0
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 1.3e-28 131.7 123 56.1
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 1.1e-24 118.6 390 26.4
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.7e-18 97.4 83 65.1
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 4.5e-18 96.7 78 62.8
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 7.8e-18 95.9 81 63.0
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 6.6e-17 92.8 77 59.7
CAN.G1376.1 Capsicum annuum HOM05D004980 ORTHO05D021411 1.6e-15 88.2 138 42.0
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 7.5e-13 79.3 79 48.1
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 8.3e-12 75.9 64 67.2
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 2.7e-10 70.9 61 60.7
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 3.9e-09 67.0 73 53.4
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 7.3e-08 62.8 40 77.5
CAN.G1014.20 Capsicum annuum HOM05D007058 ORTHO05D021411 9.5e-08 62.4 37 81.1
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 8.0e-07 59.3 61 50.8
CAN.G138.1 Capsicum annuum HOM05D001997 ORTHO05D004620 3.1e-06 57.4 36 75.0


User provided reference genes

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