Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 2.8e-92 342.0 184 100.0
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 6.0e-55 218.0 155 71.6
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 7.9e-55 217.6 155 71.6
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 2.1e-52 209.5 155 71.6
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 2.2e-49 199.5 155 66.5
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 3.8e-33 145.6 116 62.9
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 1.2e-31 140.6 129 53.5
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 5.1e-30 135.2 146 48.6
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 4.3e-29 132.1 118 53.4
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 7.4e-29 131.3 143 47.6
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.2e-28 129.8 148 50.0
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.2e-28 129.8 148 50.0
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 6.3e-28 128.3 105 53.3
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 3.1e-27 125.9 144 44.4
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 1.2e-26 124.0 120 50.8
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 5.9e-26 121.7 127 48.0
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 1.7e-25 120.2 135 45.9
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 2.9e-25 119.4 93 58.1
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 4.2e-24 115.5 116 48.3
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 5.5e-24 115.2 104 51.0
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 7.2e-24 114.8 148 41.9
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 2.7e-23 112.8 131 42.7
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 6.1e-23 111.7 130 42.3
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 6.1e-23 111.7 137 43.1
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 7.9e-23 111.3 103 51.5
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.0e-22 110.9 137 43.1
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 1.8e-22 110.2 121 43.8
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 3.0e-22 109.4 137 41.6
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 3.0e-22 109.4 143 40.6
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 3.9e-22 109.0 123 46.3
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 6.7e-22 108.2 119 48.7
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 2.0e-21 106.7 127 42.5
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 2.0e-21 106.7 151 39.7
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 2.5e-21 106.3 138 44.2
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 2.5e-21 106.3 138 44.2
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 3.3e-21 105.9 137 41.6
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 7.4e-21 104.8 138 42.8
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 9.7e-21 104.4 126 42.9
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 9.7e-21 104.4 143 38.5
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 3.7e-20 102.4 126 40.5
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 3.7e-20 102.4 103 46.6
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 1.4e-19 100.5 115 44.3
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 1.8e-19 100.1 106 45.3
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 2.4e-19 99.8 103 46.6
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 2.4e-19 99.8 103 46.6
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 4.1e-19 99.0 107 43.9
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 4.1e-19 99.0 95 45.3
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 4.1e-19 99.0 129 40.3
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 5.3e-19 98.6 134 40.3
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 5.3e-19 98.6 128 41.4
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 5.3e-19 98.6 153 38.6
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 5.3e-19 98.6 131 40.5
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 9.1e-19 97.8 128 41.4
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 1.2e-18 97.4 114 43.9
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 1.2e-18 97.4 114 43.9
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 1.5e-18 97.1 144 37.5
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 1.5e-18 97.1 114 42.1
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 2.0e-18 96.7 135 41.5
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 2.0e-18 96.7 100 46.0
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 2.0e-18 96.7 131 40.5
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 2.6e-18 96.3 148 38.5
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 3.4e-18 95.9 162 35.8
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 5.9e-18 95.1 156 36.5
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 5.9e-18 95.1 156 36.5
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 5.9e-18 95.1 135 40.7
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 5.9e-18 95.1 132 40.2
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 7.7e-18 94.7 120 41.7
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 1.7e-17 93.6 105 45.7
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 1.7e-17 93.6 143 36.4
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 2.2e-17 93.2 126 40.5
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 2.9e-17 92.8 143 38.5
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 2.9e-17 92.8 143 38.5
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 2.9e-17 92.8 117 41.9
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 3.8e-17 92.4 102 42.2
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 3.8e-17 92.4 137 39.4
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 5.0e-17 92.0 103 41.7
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 5.0e-17 92.0 127 38.6
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 8.5e-17 91.3 110 42.7
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 1.4e-16 90.5 103 43.7
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 1.9e-16 90.1 127 38.6
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 2.5e-16 89.7 143 36.4
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 2.5e-16 89.7 117 39.3
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 3.2e-16 89.4 95 45.3
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 5.5e-16 88.6 160 34.4
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 5.5e-16 88.6 78 51.3
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 7.2e-16 88.2 143 38.5
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 7.2e-16 88.2 110 40.0
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 7.2e-16 88.2 110 40.0
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 1.2e-15 87.4 103 41.7
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 1.6e-15 87.0 123 37.4
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 1.1e-13 80.9 85 45.9
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 1.5e-13 80.5 104 39.4
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 3.3e-13 79.3 120 39.2
Peaxi162Scf00092g00337 Petunia axillaris HOM05D007411 ORTHO05D009025 5.7e-13 78.6 79 54.4
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 1.1e-11 74.3 116 37.1
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 2.4e-11 73.2 91 40.7
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 1.6e-10 70.5 81 42.0
TAR633G1834 Trochodendron aralioides HOM05D007411 ORTHO05D009025 5.0e-09 65.5 91 41.8
FvH4_3g08061 Fragaria vesca HOM05D007411 ORTHO05D009025 4.2e-08 62.4 79 39.2
SEGI_16230 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 7.2e-08 61.6 87 34.5
SEGI_32233 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 7.2e-08 61.6 87 34.5
SEGI_22696 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 3.6e-07 59.3 76 38.2
SEGI_37893 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 6.1e-07 58.5 76 35.5
SEGI_22879 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 1.8e-06 57.0 115 35.7
SEGI_40524 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 1.8e-06 57.0 76 36.8
FvH4_3g16330 Fragaria vesca HOM05D018240 ORTHO05D025480 2.3e-06 56.6 54 44.4
Zm00001eb408970 Zea mays HOM05D032292 ORTHO05D009025 2.3e-06 56.6 82 36.6
Lalb_Chr09g0335101 Lupinus albus HOM05D000489 ORTHO05D000372 3.0e-06 56.2 111 34.2
CAN.G1017.2 Capsicum annuum HOM05D009823 ORTHO05D011888 4.0e-06 55.8 31 87.1
Duzib068G0900 Durio zibethinus HOM05D001204 ORTHO05D009253 6.7e-06 55.1 145 31.7


User provided reference genes

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