Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1081.1 Capsicum annuum HOM05D001758 ORTHO05D018856 1.7e-82 309.3 162 100.0
CAN.G594.6 Capsicum annuum HOM05D001758 ORTHO05D018856 8.1e-64 247.3 161 82.0
CAN.G453.10 Capsicum annuum HOM05D001758 ORTHO05D018856 1.7e-37 159.8 105 77.1
Sopen08g029630 Solanum pennellii HOM05D001758 ORTHO05D004430 4.7e-35 151.8 346 35.0
Solyc08g081320.3 Solanum lycopersicum HOM05D001758 ORTHO05D004430 6.1e-35 151.4 346 35.0
PGSC0003DMG400012194 Solanum tuberosum HOM05D001758 ORTHO05D004430 7.9e-35 151.0 346 36.1
Peaxi162Scf00074g02036 Petunia axillaris HOM05D001758 ORTHO05D004430 2.3e-34 149.4 347 34.6
Nitab4.5_0002975g0020 Nicotiana tabacum HOM05D001758 ORTHO05D004430 2.6e-33 146.0 347 34.3
Nitab4.5_0001522g0060 Nicotiana tabacum HOM05D001758 ORTHO05D004430 4.4e-33 145.2 347 34.0
CAN.G205.21 Capsicum annuum HOM05D001758 ORTHO05D018856 4.5e-30 135.2 105 66.7
CAN.G532.6 Capsicum annuum HOM05D001758 ORTHO05D004430 1.3e-29 133.7 346 33.2
CAN.G491.13 Capsicum annuum HOM05D001758 ORTHO05D018856 4.7e-27 125.2 106 63.2
Actinidia27374 Actinidia chinensis HOM05D001758 ORTHO05D004430 2.8e-24 115.9 183 44.3
Cc08_g15000 Coffea canephora HOM05D001758 ORTHO05D004430 4.8e-24 115.2 350 30.6
SGA_v2.0_scaffold48G18078 Striga asiatica HOM05D001758 ORTHO05D004430 7.0e-23 111.3 321 31.5
vmacro13195 Vaccinium macrocarpon HOM05D001758 ORTHO05D004430 2.7e-22 109.4 108 54.6
CSS0038252 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 7.7e-22 107.8 351 29.9
CSS0042527 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 7.7e-22 107.8 351 29.9
CANSAT21G2030 Cannabis sativa HOM05D001758 ORTHO05D004430 1.0e-21 107.5 358 30.7
Potri.003G130400 Populus trichocarpa HOM05D001758 ORTHO05D004430 1.0e-21 107.5 352 29.3
Sabra03G0092700 Salix brachista HOM05D001758 ORTHO05D004430 1.7e-21 106.7 354 29.7
Oeu011033.1 Olea europaea HOM05D001758 ORTHO05D004430 3.8e-21 105.5 109 58.7
AL6G45790 Arabidopsis lyrata HOM05D001758 ORTHO05D004430 6.5e-21 104.8 347 28.8
SalBow1G0547 Salvia bowleyana HOM05D001758 ORTHO05D004430 1.1e-20 104.0 348 31.6
MSTRG.1854 Avicennia marina HOM05D001758 ORTHO05D004430 1.5e-20 103.6 351 29.1
AUR62010715 Chenopodium quinoa HOM05D001758 ORTHO05D004430 2.5e-20 102.8 308 31.2
Potri.001G101400 Populus trichocarpa HOM05D001758 ORTHO05D004430 3.2e-20 102.4 352 28.4
CSS0009285 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 4.2e-20 102.1 348 29.0
CSS0019297 Camellia sinensis var. sinensis HOM05D001758 ORTHO05D004430 4.2e-20 102.1 348 29.0
SGA_v2.0_scaffold144G35913 Striga asiatica HOM05D001758 ORTHO05D004430 4.2e-20 102.1 338 30.2
Prupe.5G103900 Prunus persica HOM05D001758 ORTHO05D004430 9.4e-20 100.9 353 29.5
BcaC04g21134 Brassica carinata HOM05D001758 ORTHO05D004430 1.2e-19 100.5 349 29.2
C09p35180 Brassica napus HOM05D001758 ORTHO05D004430 1.2e-19 100.5 349 29.2
BolC9t56364H Brassica oleracea HOM05D001758 ORTHO05D004430 1.2e-19 100.5 349 29.2
Duzib084G0730 Durio zibethinus HOM05D001758 ORTHO05D004430 2.7e-19 99.4 358 28.8
A09p27770 Brassica napus HOM05D001758 ORTHO05D004430 3.6e-19 99.0 349 29.2
BraA09t38347Z Brassica rapa HOM05D001758 ORTHO05D004430 3.6e-19 99.0 349 29.2
Atru.chr9.2154 Acer truncatum HOM05D001758 ORTHO05D004430 4.7e-19 98.6 360 27.8
Thhalv10024360m.g Eutrema salsugineum HOM05D001758 ORTHO05D004430 4.7e-19 98.6 347 28.0
Thecc.03G282700 Theobroma cacao HOM05D001758 ORTHO05D004430 6.1e-19 98.2 354 29.1
Duzib205G0508 Durio zibethinus HOM05D001758 ORTHO05D004430 1.0e-18 97.4 356 28.1
QL12p032420 Quercus lobata HOM05D001758 ORTHO05D004430 1.0e-18 97.4 354 30.5
Sp6g06070 Schrenkiella parvula HOM05D001758 ORTHO05D004430 1.0e-18 97.4 350 29.1
Actinidia14582 Actinidia chinensis HOM05D001758 ORTHO05D004430 1.4e-18 97.1 351 27.6
Thhalv10028407m.g Eutrema salsugineum HOM05D001758 ORTHO05D004430 1.4e-18 97.1 349 28.7
MD14G1108600 Malus domestica HOM05D001758 ORTHO05D004430 1.8e-18 96.7 352 29.3
Oeu042339.1 Olea europaea HOM05D001758 ORTHO05D004430 1.8e-18 96.7 330 30.0
CARHR255190 Cardamine hirsuta HOM05D001758 ORTHO05D004430 3.0e-18 95.9 349 28.9
Lj8A218T22 Lonicera japonica HOM05D001758 ORTHO05D004430 3.0e-18 95.9 354 28.2
Rhsim07G0088700 Rhododendron simsii HOM05D001758 ORTHO05D004430 3.0e-18 95.9 351 28.5
MD06G1087800 Malus domestica HOM05D001758 ORTHO05D004430 5.2e-18 95.1 353 29.2
SHI07182 Sapria himalayana HOM05D000105 ORTHO05D000023 6.8e-18 94.7 68 70.6
Lalb_Chr05g0211451 Lupinus albus HOM05D001758 ORTHO05D004430 8.8e-18 94.4 350 28.0
Sabra01G0076400 Salix brachista HOM05D001758 ORTHO05D004430 1.5e-17 93.6 355 29.0
Actinidia33743 Actinidia chinensis HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Ah.07g196400 Amaranthus hybridus HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
ATR0329G044 Amborella trichopoda HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Aqoxy5G01113 Aquilegia oxysepala HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
AL7G30000 Arabidopsis lyrata HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
AT4G11380 Arabidopsis thaliana HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
AT4G23460 Arabidopsis thaliana HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
arahy.Tifrunner.gnm1.ann1.AY0C6D Arachis hypogaea HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
arahy.Tifrunner.gnm1.ann1.KK02P6 Arachis hypogaea HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
EL10Ac5g12803 Beta vulgaris HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
BcaNung04480 Brassica carinata HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Carub.0006s3029 Capsella rubella HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Carub.0007s1765 Capsella rubella HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Cpa.g.sc180.11 Carica papaya HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Cfa012203 Carpinus fangiana HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
CDE02G4367 Ceratophyllum demersum HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
CDE08G1656 Ceratophyllum demersum HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
AUR62027253 Chenopodium quinoa HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
ClCG01G002530 Citrullus lanatus HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
ClCG02G002170 Citrullus lanatus HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Haze_08813 Corylus avellana HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
MELO3C005693.2 Cucumis melo HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
MELO3C018841.2 Cucumis melo HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
CsaV3_5G002640 Cucumis sativus L. HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
CsaV3_7G003330 Cucumis sativus L. HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
ECA233G5934 Erigeron canadensis HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
ECA240G1636 Erigeron canadensis HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Migut.E01190 Erythranthe guttata HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Eucgr.D01829 Eucalyptus grandis HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Glyma.01G227000 Glycine max HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Glyma.11G015700 Glycine max HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Glyma.12G021600 Glycine max HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
HanXRQChr13g0394171 Helianthus annuus HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
HanXRQChr13g0416041 Helianthus annuus HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Lsat_1_v5_gn_6_5441 Lactuca sativa HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Lalb_Chr16g0376841 Lupinus albus HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
MBI07_g21076_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Manes.02G136100 Manihot esculenta HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Medtr4g076210 Medicago truncatula HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Nn5g30834 Nelumbo nucifera HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Nn6g31920 Nelumbo nucifera HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Os03g0355600 Oryza sativa ssp. japonica HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
PSO541G5667 Papaver somniferum HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
PSO675G0536 Papaver somniferum HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Phvul.002G034100 Phaseolus vulgaris HOM05D001758 ORTHO05D004430 2.6e-17 92.8 351 27.6
Psat7g179680 Pisum sativum HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Sed0001016 Sechium edule HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
SEGI_36929 Sequoiadendron giganteum HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Sc01g0009710 Simmondsia chinensis HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
THA.LOC104814663 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
TPR.G22570 Trifolium pratense HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
TAR381G1011 Trochodendron aralioides HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
VMungo1127G1185 Vigna mungo HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
VMungo1215G2939 Vigna mungo HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
GSVIVG01019391001 Vitis vinifera HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
Zm00001eb017130 Zea mays HOM05D001758 ORTHO05D004430 2.6e-17 92.8 68 69.1
HPP92_008911 Vanilla planifolia HOM05D001758 ORTHO05D004430 3.4e-17 92.4 68 67.6
Aa31LG6G6650 Aethionema arabicum HOM05D001758 ORTHO05D004430 4.4e-17 92.0 347 27.7
Oeu007743.2 Olea europaea HOM05D001758 ORTHO05D004430 4.4e-17 92.0 68 69.1
SMO298G0016 Selaginella moellendorffii HOM05D001758 ORTHO05D004430 4.4e-17 92.0 68 67.6
AagrBONN_evm.TU.Sc2ySwM_117.2557 Anthoceros agrestis HOM05D001758 ORTHO05D004430 5.7e-17 91.7 68 67.6
DCAR_008367 Daucus carota HOM05D001758 ORTHO05D004430 5.7e-17 91.7 68 67.6
FvH4_5g02830 Fragaria vesca HOM05D001758 ORTHO05D004430 5.7e-17 91.7 68 67.6
FAN18G3406 Fragaria x ananassa HOM05D001758 ORTHO05D004430 5.7e-17 91.7 68 67.6
MBI10_g48303_MAGBIO Magnolia biondii HOM05D001758 ORTHO05D004430 5.7e-17 91.7 68 67.6
RcHm_v2.0_Chr7g0197091 Rosa chinensis HOM05D001758 ORTHO05D004430 5.7e-17 91.7 68 67.6
Sed0023378 Sechium edule HOM05D001758 ORTHO05D004430 5.7e-17 91.7 68 67.6
TAR625G0205 Trochodendron aralioides HOM05D001758 ORTHO05D004430 5.7e-17 91.7 68 67.6
Ciclev10018786m.g Citrus clementina HOM05D001758 ORTHO05D004430 7.5e-17 91.3 353 27.8
Lsat_1_v5_gn_3_6140 Lactuca sativa HOM05D001758 ORTHO05D004430 7.5e-17 91.3 68 69.1
Lsat_1_v5_gn_6_86320 Lactuca sativa HOM05D001758 ORTHO05D004430 7.5e-17 91.3 68 67.6
Gohir.A03G019300 Gossypium hirsutum HOM05D001758 ORTHO05D004430 9.8e-17 90.9 353 28.9
Gohir.D03G149700 Gossypium hirsutum HOM05D001758 ORTHO05D004430 9.8e-17 90.9 353 28.9
Gorai.003G157000 Gossypium raimondii HOM05D001758 ORTHO05D004430 9.8e-17 90.9 353 28.9
THA.LOC104813023 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 9.8e-17 90.9 347 28.5
CBR_g10902 Chara braunii HOM05D001758 ORTHO05D004430 1.3e-16 90.5 68 66.2
DCAR_005564 Daucus carota HOM05D001758 ORTHO05D004430 1.3e-16 90.5 68 66.2
Gohir.D08G202500 Gossypium hirsutum HOM05D001758 ORTHO05D004430 1.3e-16 90.5 68 66.2
Gorai.004G213900 Gossypium raimondii HOM05D001758 ORTHO05D004430 1.3e-16 90.5 68 66.2
Mapoly0002s0295 Marchantia polymorpha HOM05D001758 ORTHO05D004430 1.3e-16 90.5 68 66.2
Pp3c1_19340 Physcomitrium patens HOM05D001758 ORTHO05D004430 1.3e-16 90.5 68 66.2
Pp3c2_18140 Physcomitrium patens HOM05D001758 ORTHO05D004430 1.3e-16 90.5 68 66.2
BcaB01g01638 Brassica carinata HOM05D001758 ORTHO05D004430 1.7e-16 90.1 349 27.5
Sp7g21360 Schrenkiella parvula HOM05D001758 ORTHO05D004430 1.7e-16 90.1 347 27.4
Phvul.011G078200 Phaseolus vulgaris HOM05D001758 ORTHO05D004430 2.2e-16 89.7 350 28.6
Aa31LG9G10850 Aethionema arabicum HOM05D001758 ORTHO05D004430 2.8e-16 89.4 349 27.5
FAN08G0671 Fragaria x ananassa HOM05D001758 ORTHO05D004430 2.8e-16 89.4 354 28.0
Pp3c14_2460 Physcomitrium patens HOM05D001758 ORTHO05D004430 2.8e-16 89.4 68 64.7
THA.LOC104806416 Tarenaya hassleriana HOM05D001758 ORTHO05D004430 2.8e-16 89.4 348 27.3
TWI60G1699 Tripterygium wilfordii HOM05D001758 ORTHO05D004430 2.8e-16 89.4 353 28.0
Zm00001eb394540 Zea mays HOM05D001758 ORTHO05D004430 3.7e-16 89.0 351 27.4
CiPaw.12G091200 Carya illinoinensis HOM05D001758 ORTHO05D004430 4.8e-16 88.6 354 27.7
Gohir.A08G184000 Gossypium hirsutum HOM05D001758 ORTHO05D004430 4.8e-16 88.6 68 64.7
A03p54320 Brassica napus HOM05D001758 ORTHO05D004430 6.3e-16 88.2 69 68.1
C07p52720 Brassica napus HOM05D001758 ORTHO05D004430 6.3e-16 88.2 69 68.1
BolC7t45772H Brassica oleracea HOM05D001758 ORTHO05D004430 6.3e-16 88.2 69 68.1
BraA03t14494Z Brassica rapa HOM05D001758 ORTHO05D004430 6.3e-16 88.2 69 68.1
Dinv38922 Davidia involucrata HOM05D001758 ORTHO05D004430 6.3e-16 88.2 323 28.2
FAN04G0007 Fragaria x ananassa HOM05D001758 ORTHO05D004430 8.3e-16 87.8 354 27.7
Lj3g0022998 Lotus japonicus HOM05D001758 ORTHO05D004430 1.1e-15 87.4 347 27.7
FAN13G1114 Fragaria x ananassa HOM05D001758 ORTHO05D004430 3.1e-15 85.9 354 27.1
unitig_62.g23539 Utricularia gibba HOM05D001758 ORTHO05D004430 4.1e-15 85.5 67 65.7
PRCOL_00003609 Prasinoderma coloniale HOM05D001758 ORTHO05D004430 5.4e-15 85.1 68 60.3
COL.COLO4_34497 Corchorus olitorius HOM05D001758 ORTHO05D004430 7.7e-14 81.3 110 50.9
Hund14840 Selenicereus undatus HOM05D001758 ORTHO05D004430 1.7e-13 80.1 109 49.5
CAN.G453.6 Capsicum annuum HOM05D001758 ORTHO05D018856 3.8e-13 79.0 143 37.8
Cre11.g478156 Chlamydomonas reinhardtii HOM05D001758 ORTHO05D004430 3.8e-13 79.0 68 54.4
CAN.G279.5 Capsicum annuum HOM05D001758 ORTHO05D018856 1.1e-12 77.4 49 81.6
MCO01G139 Micromonas commoda HOM05D001758 ORTHO05D004430 3.0e-10 69.3 166 33.1
Eucgr.G00898 Eucalyptus grandis HOM05D001758 ORTHO05D023347 5.2e-10 68.6 57 61.4
CAN.G968.9 Capsicum annuum HOM05D001758 ORTHO05D018856 6.8e-10 68.2 48 72.9
Glyma.11G095501 Glycine max HOM05D001758 ORTHO05D004430 4.4e-09 65.5 100 42.0
vmacro13146 Vaccinium macrocarpon HOM05D001758 ORTHO05D004430 5.7e-09 65.1 69 55.1
Cfa025216 Carpinus fangiana HOM05D001758 ORTHO05D004430 3.7e-08 62.4 68 38.2
C03p35440 Brassica napus HOM05D001758 ORTHO05D000557 1.4e-07 60.5 93 40.9
Lj2C182T2 Lonicera japonica HOM05D001758 ORTHO05D004430 4.1e-07 58.9 45 60.0
Cfa024790 Carpinus fangiana HOM05D001758 ORTHO05D004430 2.0e-06 56.6 65 40.0


User provided reference genes

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