Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1036.8 Capsicum annuum HOM05D003667 ORTHO05D004397 2.9e-111 405.2 199 100.0
CAN.G992.19 Capsicum annuum HOM05D003667 ORTHO05D004397 8.0e-37 157.9 148 62.2
Nitab4.5_0001774g0040 Nicotiana tabacum HOM05D003667 ORTHO05D004397 2.3e-36 156.4 151 61.6
Solyc07g047720.3 Solanum lycopersicum HOM05D003667 ORTHO05D004397 1.2e-35 154.1 148 61.5
Sopen07g024170 Solanum pennellii HOM05D003667 ORTHO05D004397 1.2e-35 154.1 148 61.5
PGSC0003DMG400006127 Solanum tuberosum HOM05D003667 ORTHO05D004397 4.4e-35 152.1 147 61.2
Nitab4.5_0001741g0020 Nicotiana tabacum HOM05D003667 ORTHO05D004397 4.2e-30 135.6 150 53.3
PGSC0003DMG400018832 Solanum tuberosum HOM05D003667 ORTHO05D004397 3.6e-29 132.5 150 52.0
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 3.4e-27 125.9 139 54.0
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 4.4e-27 125.6 156 49.4
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.3e-26 124.0 150 50.7
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 1.7e-26 123.6 150 50.7
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 1.7e-26 123.6 144 50.7
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 2.2e-26 123.2 150 51.3
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 3.7e-26 122.5 150 51.3
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 3.7e-26 122.5 144 51.4
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 6.3e-26 121.7 147 51.0
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 8.3e-26 121.3 147 50.3
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 8.3e-26 121.3 147 51.7
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 8.3e-26 121.3 147 50.3
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 8.3e-26 121.3 144 50.7
RcHm_v2.0_Chr5g0045181 Rosa chinensis HOM05D003667 ORTHO05D004397 8.3e-26 121.3 139 48.9
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 1.1e-25 120.9 144 50.7
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.1e-25 120.9 148 50.0
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.1e-25 120.9 148 50.0
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 1.1e-25 120.9 148 50.0
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 1.4e-25 120.6 139 52.5
Lalb_Chr17g0348151 Lupinus albus HOM05D003667 ORTHO05D004397 1.8e-25 120.2 142 50.0
Nn7g37255 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.8e-25 120.2 139 49.6
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 2.4e-25 119.8 147 49.0
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 5.4e-25 118.6 139 47.5
SGA_v2.0_scaffold41G15803 Striga asiatica HOM05D003667 ORTHO05D004397 5.4e-25 118.6 157 49.7
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 5.4e-25 118.6 147 49.0
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 7.0e-25 118.2 139 47.5
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 7.0e-25 118.2 139 47.5
FAN21G0540 Fragaria x ananassa HOM05D003667 ORTHO05D004397 9.2e-25 117.9 139 47.5
Peaxi162Scf00776g00027 Petunia axillaris HOM05D003667 ORTHO05D004397 1.2e-24 117.5 149 48.3
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 2.0e-24 116.7 157 48.4
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 2.7e-24 116.3 147 48.3
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 3.5e-24 115.9 147 48.3
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 3.5e-24 115.9 158 49.4
arahy.Tifrunner.gnm1.ann1.7QGR70 Arachis hypogaea HOM05D003667 ORTHO05D004397 5.9e-24 115.2 142 46.5
arahy.Tifrunner.gnm1.ann1.VNW58P Arachis hypogaea HOM05D003667 ORTHO05D004397 5.9e-24 115.2 142 46.5
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 5.9e-24 115.2 150 48.0
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 5.9e-24 115.2 156 44.9
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 1.0e-23 114.4 147 46.9
Prupe.2G153200 Prunus persica HOM05D003667 ORTHO05D004397 1.0e-23 114.4 139 47.5
HPP92_027259 Vanilla planifolia HOM05D003667 ORTHO05D004397 1.0e-23 114.4 180 43.3
arahy.Tifrunner.gnm1.ann1.FV18MX Arachis hypogaea HOM05D003667 ORTHO05D004397 1.7e-23 113.6 142 45.8
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 2.9e-23 112.8 144 47.9
Migut.L01870 Erythranthe guttata HOM05D003667 ORTHO05D004397 2.9e-23 112.8 140 48.6
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 2.9e-23 112.8 139 46.8
HanXRQChr07g0197181 Helianthus annuus HOM05D003667 ORTHO05D004397 2.9e-23 112.8 139 46.0
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 2.9e-23 112.8 139 46.8
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 2.9e-23 112.8 145 47.6
TWI38G1994 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 3.8e-23 112.5 139 48.9
HanXRQChr14g0453611 Helianthus annuus HOM05D003667 ORTHO05D004397 1.1e-22 110.9 134 48.5
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 1.1e-22 110.9 139 45.3
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 1.1e-22 110.9 144 47.9
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.5e-22 110.5 145 46.9
Os03g0655200 Oryza sativa ssp. japonica HOM05D003667 ORTHO05D004397 1.5e-22 110.5 140 45.7
MSTRG.26557 Avicennia marina HOM05D003667 ORTHO05D004397 1.9e-22 110.2 140 47.9
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 1.9e-22 110.2 150 45.3
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 2.5e-22 109.8 139 48.9
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 2.5e-22 109.8 139 45.3
Oeu035461.1 Olea europaea HOM05D003667 ORTHO05D004397 2.5e-22 109.8 138 47.1
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 2.5e-22 109.8 148 45.3
PSO170G5262 Papaver somniferum HOM05D003667 ORTHO05D004397 3.3e-22 109.4 147 44.2
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 4.3e-22 109.0 139 47.5
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 7.3e-22 108.2 134 47.8
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 7.3e-22 108.2 144 47.2
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 7.3e-22 108.2 139 47.5
Zm00001eb052810 Zea mays HOM05D003667 ORTHO05D004397 7.3e-22 108.2 140 45.0
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 9.5e-22 107.8 150 44.7
Sed0010728 Sechium edule HOM05D003667 ORTHO05D004397 9.5e-22 107.8 139 45.3
SGA_v2.0_scaffold392G50657 Striga asiatica HOM05D003667 ORTHO05D004397 1.2e-21 107.5 140 46.4
PSO357G0141 Papaver somniferum HOM05D003667 ORTHO05D004397 1.6e-21 107.1 147 43.5
TWI38G1198 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 2.1e-21 106.7 139 46.8
Oeu003870.1 Olea europaea HOM05D003667 ORTHO05D004397 2.8e-21 106.3 124 53.2
PSO675G2224 Papaver somniferum HOM05D003667 ORTHO05D004397 2.8e-21 106.3 147 43.5
Ah.02g128310 Amaranthus hybridus HOM05D003667 ORTHO05D004397 4.7e-21 105.5 144 45.1
Cpa.g.sc28.13 Carica papaya HOM05D003667 ORTHO05D004397 6.1e-21 105.1 142 43.7
ECA238G3478 Erigeron canadensis HOM05D003667 ORTHO05D004397 8.0e-21 104.8 133 45.9
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 8.0e-21 104.8 137 46.7
PSO541G6155 Papaver somniferum HOM05D003667 ORTHO05D004397 1.4e-20 104.0 147 42.2
Hund10761 Selenicereus undatus HOM05D003667 ORTHO05D004397 1.4e-20 104.0 136 44.1
THA.LOC104823778 Tarenaya hassleriana HOM05D003667 ORTHO05D004397 1.8e-20 103.6 142 42.3
Aqoxy1G00535 Aquilegia oxysepala HOM05D003667 ORTHO05D004397 3.0e-20 102.8 156 42.3
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 4.0e-20 102.4 139 43.9
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 5.2e-20 102.1 139 43.2
Haze_14026 Corylus avellana HOM05D003667 ORTHO05D004397 6.8e-20 101.7 139 46.8
EL10Ac7g17477 Beta vulgaris HOM05D003667 ORTHO05D004397 1.5e-19 100.5 139 43.9
AUR62008662 Chenopodium quinoa HOM05D003667 ORTHO05D004397 1.5e-19 100.5 138 44.9
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 2.0e-19 100.1 139 46.0
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 3.4e-19 99.4 128 45.3
BcaB02g09321 Brassica carinata HOM05D003667 ORTHO05D004397 5.7e-19 98.6 156 37.2
C04p11070 Brassica napus HOM05D003667 ORTHO05D004397 7.5e-19 98.2 156 37.2
BolC4t22755H Brassica oleracea HOM05D003667 ORTHO05D004397 7.5e-19 98.2 156 37.2
CDE10G1021 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 9.8e-19 97.8 139 42.4
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 1.3e-18 97.4 156 36.5
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 1.7e-18 97.1 156 36.5
Sp4g19200 Schrenkiella parvula HOM05D003667 ORTHO05D004397 1.7e-18 97.1 156 37.8
CiPaw.03G011100 Carya illinoinensis HOM05D003667 ORTHO05D004397 2.9e-18 96.3 139 44.6
CARHR131380 Cardamine hirsuta HOM05D003667 ORTHO05D004397 1.1e-17 94.4 156 35.9
Thhalv10017208m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 1.1e-17 94.4 142 38.0
Prupe.7G022400 Prunus persica HOM05D003667 ORTHO05D004397 1.1e-17 94.4 122 46.7
AT2G36900 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.4e-17 94.0 156 35.9
Carub.0004s1876 Capsella rubella HOM05D003667 ORTHO05D004397 1.4e-17 94.0 156 35.9
Thhalv10014611m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 1.4e-17 94.0 156 36.5
unitig_8.g4943 Utricularia gibba HOM05D003667 ORTHO05D004397 1.4e-17 94.0 138 41.3
CARHR257860 Cardamine hirsuta HOM05D003667 ORTHO05D004397 2.4e-17 93.2 151 36.4
AL4G33130 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 3.2e-17 92.8 156 35.3
AL8G24670 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 3.2e-17 92.8 151 36.4
AT5G50440 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 3.2e-17 92.8 151 36.4
CSS0044789 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 4.1e-17 92.4 62 80.6
DCAR_013483 Daucus carota HOM05D003667 ORTHO05D004397 5.4e-17 92.0 124 46.8
Carub.0008s1055 Capsella rubella HOM05D003667 ORTHO05D004397 1.6e-16 90.5 152 34.2
Lj6g0022641 Lotus japonicus HOM05D003667 ORTHO05D004397 2.7e-16 89.7 124 45.2
Cc03_g11050 Coffea canephora HOM05D003667 ORTHO05D004397 4.6e-16 89.0 140 40.0
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 1.0e-15 87.8 142 37.3
Dinv25059 Davidia involucrata HOM05D003667 ORTHO05D004397 3.9e-15 85.9 125 45.6
SEGI_40073 Sequoiadendron giganteum HOM05D003667 ORTHO05D004397 5.0e-15 85.5 138 37.7
AUR62033108 Chenopodium quinoa HOM05D003667 ORTHO05D004397 1.9e-14 83.6 63 71.4
Rhsim02G0195900 Rhododendron simsii HOM05D003667 ORTHO05D004397 1.9e-14 83.6 62 75.8
CiPaw.04G007600 Carya illinoinensis HOM05D003667 ORTHO05D004397 2.5e-14 83.2 124 45.2
BcaC02g11814 Brassica carinata HOM05D003667 ORTHO05D004397 4.3e-14 82.4 127 39.4
Mapoly0001s0234 Marchantia polymorpha HOM05D003667 ORTHO05D004397 9.5e-14 81.3 139 37.4
Pp3c11_11980 Physcomitrium patens HOM05D003667 ORTHO05D004397 9.5e-14 81.3 139 34.5
Pp3c7_13000 Physcomitrium patens HOM05D003667 ORTHO05D004397 2.8e-13 79.7 139 33.8
SMO358G0442 Selaginella moellendorffii HOM05D003667 ORTHO05D004397 8.0e-13 78.2 140 36.4
Actinidia03933 Actinidia chinensis HOM05D003667 ORTHO05D004397 2.3e-12 76.6 63 65.1
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 2.3e-12 76.6 62 69.4
MSTRG.10431 Avicennia marina HOM05D003667 ORTHO05D004397 2.0e-11 73.6 64 62.5
Solyc05g040100.4 Solanum lycopersicum HOM05D003667 ORTHO05D004397 2.0e-11 73.6 54 70.4
arahy.Tifrunner.gnm1.ann1.K13S6W Arachis hypogaea HOM05D004599 ORTHO05D005564 2.6e-11 73.2 56 64.3
Nitab4.5_0002669g0010 Nicotiana tabacum HOM05D003667 ORTHO05D004397 1.7e-10 70.5 45 71.1
AagrBONN_evm.TU.Sc2ySwM_117.3822 Anthoceros agrestis HOM05D003667 ORTHO05D004397 6.4e-10 68.6 150 30.7
AagrBONN_evm.TU.Sc2ySwM_362.869 Anthoceros agrestis HOM05D003667 ORTHO05D004397 6.4e-10 68.6 150 30.7
arahy.Tifrunner.gnm1.ann1.B982CP Arachis hypogaea HOM05D003667 ORTHO05D004397 1.9e-09 67.0 54 59.3
CDE10G1036 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 7.0e-09 65.1 127 33.9
unitig_578.g16057 Utricularia gibba HOM05D003667 ORTHO05D004397 1.6e-08 63.9 63 54.0
Lalb_Chr10g0106501 Lupinus albus HOM05D003667 ORTHO05D004397 3.3e-06 56.2 36 77.8
FvH4_3g32534 Fragaria vesca HOM05D003667 ORTHO05D004397 5.6e-06 55.5 60 51.7
Rhsim02G0194700 Rhododendron simsii HOM05D003667 ORTHO05D004397 7.3e-06 55.1 41 63.4
Rhsim02G0195800 Rhododendron simsii HOM05D003667 ORTHO05D004397 7.3e-06 55.1 41 63.4


User provided reference genes

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