Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p15390 Brassica napus HOM05D013073 ORTHO05D014961 5.6e-101 370.9 185 100.0
C05p14270 Brassica napus HOM05D013073 ORTHO05D014961 2.0e-82 309.3 208 81.2
C06p00300 Brassica napus HOM05D013073 ORTHO05D014961 2.9e-65 252.3 175 77.1
C03p60280 Brassica napus HOM05D013073 ORTHO05D014961 7.4e-53 211.1 189 66.7
BcaC01g02794 Brassica carinata HOM05D013073 ORTHO05D014961 2.4e-35 152.9 142 68.3
BcaC08g44111 Brassica carinata HOM05D013073 ORTHO05D014961 2.0e-34 149.8 142 65.5
BraA09t37035Z Brassica rapa HOM05D013073 ORTHO05D014961 9.1e-27 124.4 142 56.3
BolSC21t60235H Brassica oleracea HOM05D013073 ORTHO05D014961 1.3e-25 120.6 70 88.6
BcaC02g09245 Brassica carinata HOM05D013073 ORTHO05D014961 6.3e-20 101.7 135 52.6
BcaC08g42818 Brassica carinata HOM05D013073 ORTHO05D014961 5.0e-17 92.0 79 60.8
BolC3t18290H Brassica oleracea HOM05D013073 ORTHO05D014961 8.3e-12 74.7 45 93.3
C02p60860 Brassica napus HOM05D005289 ORTHO05D006346 2.4e-11 73.2 52 78.8
BolC2t12138H Brassica oleracea HOM05D005289 ORTHO05D006346 2.4e-11 73.2 52 78.8
A02p40970 Brassica napus HOM05D005289 ORTHO05D006346 4.1e-11 72.4 52 78.8
BraA02t09045Z Brassica rapa HOM05D005289 ORTHO05D006346 2.0e-10 70.1 52 76.9
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 1.2e-07 60.8 55 54.5
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 1.6e-07 60.5 88 40.9
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 2.1e-07 60.1 84 42.9
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.1e-07 60.1 93 39.8
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 2.1e-07 60.1 93 39.8
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 2.8e-07 59.7 89 41.6
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 2.8e-07 59.7 84 41.7
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 2.8e-07 59.7 64 48.4
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 3.6e-07 59.3 84 41.7
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 3.6e-07 59.3 84 42.9
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 3.6e-07 59.3 84 41.7
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 3.6e-07 59.3 89 41.6
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 3.6e-07 59.3 88 40.9
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 3.6e-07 59.3 88 40.9
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 3.6e-07 59.3 84 42.9
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 4.7e-07 58.9 88 40.9
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 4.7e-07 58.9 84 42.9
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 4.7e-07 58.9 84 42.9
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 4.7e-07 58.9 88 40.9
Dinv30726 Davidia involucrata HOM05D005716 ORTHO05D014961 6.1e-07 58.5 55 54.5
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 8.0e-07 58.2 55 54.5
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 8.0e-07 58.2 88 40.9
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 8.0e-07 58.2 88 40.9
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 1.0e-06 57.8 84 41.7
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 1.0e-06 57.8 55 54.5
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.0e-06 57.8 85 42.4
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 1.0e-06 57.8 85 42.4
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 1.0e-06 57.8 93 38.7
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 1.4e-06 57.4 87 40.2
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 1.4e-06 57.4 88 40.9
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 1.8e-06 57.0 55 54.5
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 1.8e-06 57.0 84 41.7
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 1.8e-06 57.0 84 40.5
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 1.8e-06 57.0 88 39.8
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 1.8e-06 57.0 80 42.5
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 2.3e-06 56.6 59 49.2
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 2.3e-06 56.6 84 41.7
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 3.0e-06 56.2 84 40.5
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 3.0e-06 56.2 84 42.9
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 3.0e-06 56.2 88 39.8
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 3.0e-06 56.2 84 40.5
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 4.0e-06 55.8 88 39.8
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 4.0e-06 55.8 88 39.8
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 4.0e-06 55.8 88 39.8
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 4.0e-06 55.8 55 50.9
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 4.0e-06 55.8 88 38.6
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 4.0e-06 55.8 84 41.7
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 4.0e-06 55.8 88 39.8
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 4.0e-06 55.8 84 41.7
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 5.2e-06 55.5 85 42.4
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 5.2e-06 55.5 84 39.3
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 5.2e-06 55.5 29 79.3
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 5.2e-06 55.5 88 38.6
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 6.8e-06 55.1 88 39.8
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 6.8e-06 55.1 24 91.7
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 6.8e-06 55.1 24 91.7
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 6.8e-06 55.1 24 91.7
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 6.8e-06 55.1 88 39.8
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 6.8e-06 55.1 88 39.8
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 6.8e-06 55.1 24 91.7
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 6.8e-06 55.1 84 41.7
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 6.8e-06 55.1 84 41.7
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 6.8e-06 55.1 84 40.5
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 8.8e-06 54.7 24 87.5
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 8.8e-06 54.7 84 40.5


User provided reference genes

Program Settings