Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 5.0e-67 257.7 134 100.0
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.1e-66 256.5 134 99.3
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 3.6e-65 251.5 134 97.0
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.0e-64 250.0 140 95.0
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 2.0e-63 245.7 140 93.6
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.0e-60 235.7 136 92.6
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 6.5e-59 230.7 136 91.9
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 6.5e-59 230.7 136 91.9
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 1.1e-58 229.9 138 92.0
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 1.8e-56 222.6 129 90.7
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 1.8e-56 222.6 129 90.7
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 1.3e-51 206.5 132 84.8
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 1.1e-50 203.4 138 80.4
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 1.2e-47 193.4 138 77.5
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 2.6e-47 192.2 139 78.4
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 8.3e-46 187.2 135 73.3
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 1.1e-45 186.8 134 75.4
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 6.6e-43 177.6 115 82.6
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 4.9e-38 161.4 143 62.2
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 2.4e-37 159.1 143 61.5
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 5.4e-37 157.9 144 61.1
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 9.2e-37 157.1 119 70.6
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 4.6e-36 154.8 107 72.0
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 1.0e-35 153.7 138 62.3
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.7e-35 152.9 145 60.0
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 2.9e-35 152.1 127 66.9
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 2.9e-35 152.1 128 62.5
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 3.9e-35 151.8 145 60.0
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 5.0e-35 151.4 90 81.1
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 8.6e-35 150.6 140 59.3
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 1.1e-34 150.2 118 69.5
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.9e-34 149.4 139 63.3
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 4.3e-34 148.3 118 65.3
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 5.6e-34 147.9 134 60.4
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 5.6e-34 147.9 126 65.1
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 5.6e-34 147.9 136 60.3
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 5.6e-34 147.9 102 73.5
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 7.3e-34 147.5 92 77.2
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 9.5e-34 147.1 108 69.4
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 1.2e-33 146.7 113 61.9
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 1.6e-33 146.4 117 67.5
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.6e-33 146.4 88 79.5
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.6e-33 146.4 128 61.7
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 1.6e-33 146.4 104 70.2
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 1.6e-33 146.4 106 66.0
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 3.6e-33 145.2 128 60.9
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 6.2e-33 144.4 115 66.1
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 6.2e-33 144.4 137 61.3
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 8.0e-33 144.1 144 60.4
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.0e-32 143.7 92 76.1
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.4e-32 143.3 112 71.4
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 2.3e-32 142.5 151 55.6
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 2.3e-32 142.5 117 64.1
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 3.1e-32 142.1 136 62.5
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 4.0e-32 141.7 143 58.0
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 5.2e-32 141.4 137 60.6
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 6.8e-32 141.0 132 62.9
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 6.8e-32 141.0 90 74.4
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 8.9e-32 140.6 90 80.0
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 8.9e-32 140.6 87 77.0
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 8.9e-32 140.6 170 51.2
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.2e-31 140.2 144 59.0
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 1.2e-31 140.2 111 66.7
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 1.2e-31 140.2 112 64.3
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 2.0e-31 139.4 105 68.6
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 2.0e-31 139.4 93 75.3
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 2.6e-31 139.0 101 69.3
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 2.6e-31 139.0 101 69.3
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 3.4e-31 138.7 122 64.8
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.4e-31 138.7 140 60.7
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.7e-30 136.3 90 77.8
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 1.7e-30 136.3 118 63.6
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 2.2e-30 136.0 114 66.7
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 2.2e-30 136.0 104 68.3
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 2.9e-30 135.6 140 57.9
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 2.9e-30 135.6 150 54.0
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 3.7e-30 135.2 88 77.3
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 3.7e-30 135.2 106 63.2
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 3.7e-30 135.2 101 67.3
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.4e-29 133.3 117 61.5
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 1.9e-29 132.9 92 75.0
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 3.2e-29 132.1 151 54.3
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 7.0e-29 131.0 87 72.4
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 2.0e-28 129.4 108 63.9
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 6.0e-28 127.9 116 61.2
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 2.5e-26 122.5 74 78.4
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.2e-25 120.2 98 67.3
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.8e-25 119.0 84 72.6
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 4.7e-25 118.2 71 77.5
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 4.7e-25 118.2 72 76.4
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 1.1e-24 117.1 83 72.3
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.5e-23 113.2 66 78.8
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 5.4e-21 104.8 124 51.6
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 7.1e-21 104.4 98 53.1
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 8.1e-17 90.9 88 59.1
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 4.0e-16 88.6 108 49.1
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 3.7e-14 82.0 72 58.3
BcaC01g03170 Brassica carinata HOM05D007368 ORTHO05D009330 7.1e-13 77.8 53 77.4
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 3.5e-12 75.5 111 39.6
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 4.6e-12 75.1 133 41.4
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 2.5e-10 69.3 81 40.7
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 1.1e-08 63.9 52 57.7


User provided reference genes

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