Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 1.6e-56 222.6 122 100.0
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 1.6e-56 222.6 122 100.0
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 1.8e-55 219.2 122 97.5
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 8.9e-55 216.9 122 96.7
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 8.3e-53 210.3 122 93.4
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 3.2e-52 208.4 122 92.6
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 7.0e-52 207.2 122 92.6
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 1.6e-51 206.1 122 91.8
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.3e-50 203.0 123 89.4
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.7e-50 202.6 122 88.5
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 2.3e-50 202.2 122 87.7
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 2.3e-50 202.2 122 88.5
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 8.6e-50 200.3 122 91.0
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 4.3e-49 198.0 121 91.7
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 4.3e-49 198.0 121 91.7
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 5.6e-49 197.6 123 87.0
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 7.3e-49 197.2 121 91.7
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 7.3e-49 197.2 121 91.7
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 9.5e-49 196.8 122 86.1
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 9.5e-49 196.8 120 91.7
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 8.0e-48 193.7 122 85.2
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 2.3e-47 192.2 122 85.2
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 2.9e-45 185.3 122 77.9
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 4.9e-45 184.5 120 81.7
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 6.4e-45 184.1 122 79.5
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 8.3e-45 183.7 148 73.0
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 1.4e-44 183.0 122 79.5
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 2.4e-44 182.2 122 77.0
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 7.1e-44 180.6 122 79.5
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 9.2e-44 180.3 122 77.0
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.6e-43 179.5 122 78.7
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.6e-43 179.5 122 78.7
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 1.6e-43 179.5 120 79.2
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 2.7e-43 178.7 122 76.2
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.7e-43 178.7 122 76.2
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 2.7e-43 178.7 122 77.9
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 3.5e-43 178.3 122 76.2
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 4.6e-43 177.9 119 79.8
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 4.6e-43 177.9 122 75.4
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 4.6e-43 177.9 120 77.5
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 4.6e-43 177.9 122 76.2
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 4.6e-43 177.9 122 76.2
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 6.0e-43 177.6 122 77.0
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 6.0e-43 177.6 122 76.2
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 6.0e-43 177.6 120 79.2
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 7.8e-43 177.2 122 75.4
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 7.8e-43 177.2 120 77.5
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 7.8e-43 177.2 122 75.4
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 7.8e-43 177.2 122 77.9
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.3e-42 176.4 122 77.0
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 1.3e-42 176.4 122 77.0
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 1.7e-42 176.0 122 76.2
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 3.0e-42 175.3 122 76.2
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 3.0e-42 175.3 122 76.2
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 3.9e-42 174.9 122 74.6
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 5.1e-42 174.5 120 78.3
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 5.1e-42 174.5 122 76.2
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 6.6e-42 174.1 122 75.4
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 6.6e-42 174.1 122 77.0
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 8.6e-42 173.7 122 73.8
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 8.6e-42 173.7 120 75.8
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.1e-41 173.3 122 73.8
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 2.5e-41 172.2 122 74.6
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 2.5e-41 172.2 121 73.6
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 3.3e-41 171.8 122 73.0
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 3.3e-41 171.8 122 73.0
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 4.3e-41 171.4 122 74.6
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 4.3e-41 171.4 121 74.4
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 4.3e-41 171.4 120 74.2
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 4.3e-41 171.4 122 74.6
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 4.3e-41 171.4 122 75.4
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 5.6e-41 171.0 122 73.0
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 5.6e-41 171.0 120 74.2
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 7.3e-41 170.6 122 73.0
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 9.5e-41 170.2 122 73.0
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 9.5e-41 170.2 120 74.2
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 1.6e-40 169.5 120 74.2
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 2.1e-40 169.1 120 73.3
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 2.8e-40 168.7 120 73.3
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 3.6e-40 168.3 122 73.8
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 4.7e-40 167.9 122 70.5
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 1.1e-39 166.8 122 71.3
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 1.1e-39 166.8 121 71.9
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 1.4e-39 166.4 120 71.7
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 1.4e-39 166.4 122 71.3
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 2.3e-39 165.6 122 70.5
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 3.1e-39 165.2 120 71.7
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 8.9e-39 163.7 122 69.7
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.5e-38 162.9 122 68.9
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 2.0e-38 162.5 115 74.8
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 2.6e-38 162.2 120 73.3
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 3.4e-38 161.8 122 71.3
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 4.4e-38 161.4 120 70.8
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 5.8e-38 161.0 122 69.7
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 9.9e-38 160.2 123 70.7
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 9.9e-38 160.2 123 70.7
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 1.3e-37 159.8 122 73.0
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 6.4e-37 157.5 118 67.8
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 8.3e-37 157.1 115 73.0
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 8.3e-37 157.1 122 65.6
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 1.9e-36 156.0 122 72.1
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 4.1e-36 154.8 172 54.1
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 5.4e-36 154.5 108 75.0
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 6.0e-35 151.0 127 73.2
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 6.0e-35 151.0 135 64.4
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 3.0e-34 148.7 122 64.8
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 2.8e-32 142.1 131 61.1
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 3.6e-32 141.7 122 63.1
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 8.9e-31 137.1 115 63.5
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 1.5e-30 136.3 119 62.2
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 1.7e-29 132.9 91 76.9
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 4.9e-29 131.3 91 78.0
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 8.4e-29 130.6 103 68.0
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.4e-28 129.8 91 74.7
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.6e-27 126.3 91 74.7
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.6e-27 126.3 94 72.3
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 1.0e-26 123.6 101 65.3
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 1.1e-20 103.6 69 79.7
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 3.0e-18 95.5 70 68.6
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 1.9e-17 92.8 115 46.1
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 4.5e-14 81.6 60 78.3
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 4.5e-14 81.6 58 79.3
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 7.9e-11 70.9 46 76.1
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 1.1e-09 67.0 51 66.7
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 3.3e-09 65.5 52 71.2
BcaC05g26083 Brassica carinata HOM05D006317 ORTHO05D007852 1.8e-07 59.7 50 74.0


User provided reference genes

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