Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C07p09940 Brassica napus HOM05D005691 ORTHO05D007096 2.3e-108 395.6 198 100.0
BcaB06g26838 Brassica carinata HOM05D005691 ORTHO05D007096 4.3e-59 231.9 119 96.6
A03p44570 Brassica napus HOM05D005691 ORTHO05D007096 2.4e-57 226.1 119 92.4
BraA03t13590Z Brassica rapa HOM05D005691 ORTHO05D007096 2.4e-57 226.1 119 92.4
Sp3g23610 Schrenkiella parvula HOM05D005691 ORTHO05D007096 9.0e-57 224.2 119 91.6
C03p55370 Brassica napus HOM05D005691 ORTHO05D007096 1.3e-55 220.3 119 89.9
BcaC01g03178 Brassica carinata HOM05D005691 ORTHO05D007096 1.7e-55 219.9 119 89.9
BolC3t17809H Brassica oleracea HOM05D005691 ORTHO05D007096 1.7e-55 219.9 119 89.9
Carub.0003s2665 Capsella rubella HOM05D005691 ORTHO05D007096 2.2e-55 219.5 119 89.1
AL3G42730 Arabidopsis lyrata HOM05D005691 ORTHO05D007096 5.0e-55 218.4 119 88.2
Thhalv10003521m.g Eutrema salsugineum HOM05D005691 ORTHO05D007096 8.4e-55 217.6 119 88.2
AT2G05120 Arabidopsis thaliana HOM05D005691 ORTHO05D007096 1.1e-54 217.2 119 87.4
CARHR103010 Cardamine hirsuta HOM05D005691 ORTHO05D007096 3.2e-54 215.7 133 81.2
BcaB08g34496 Brassica carinata HOM05D005691 ORTHO05D007096 7.2e-54 214.5 119 89.9
BcaC06g35896 Brassica carinata HOM05D005691 ORTHO05D007096 5.9e-48 194.9 194 58.8
THA.LOC104815358 Tarenaya hassleriana HOM05D005691 ORTHO05D007096 4.2e-46 188.7 119 76.5
CANSAT64G0049 Cannabis sativa HOM05D005691 ORTHO05D007096 8.8e-44 181.0 119 74.8
Prupe.3G200800 Prunus persica HOM05D005691 ORTHO05D007096 2.0e-43 179.9 119 72.3
Gohir.A07G191000 Gossypium hirsutum HOM05D005691 ORTHO05D007096 3.7e-42 175.6 119 70.6
Atru.chr6.3368 Acer truncatum HOM05D005691 ORTHO05D007096 1.1e-41 174.1 119 68.1
Gohir.D07G197400 Gossypium hirsutum HOM05D005691 ORTHO05D007096 1.4e-41 173.7 119 71.4
Gorai.001G221100 Gossypium raimondii HOM05D005691 ORTHO05D007096 1.4e-41 173.7 119 71.4
RcHm_v2.0_Chr2g0156551 Rosa chinensis HOM05D005691 ORTHO05D007096 1.4e-41 173.7 119 69.7
LjContig00081g0016683 Lotus japonicus HOM05D005691 ORTHO05D007096 2.4e-41 172.9 119 69.7
Cpa.g.sc211.12 Carica papaya HOM05D005691 ORTHO05D007096 3.1e-41 172.6 119 68.1
Actinidia21444 Actinidia chinensis HOM05D005691 ORTHO05D007096 4.1e-41 172.2 119 68.9
CSS0009966 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 4.1e-41 172.2 119 68.9
CSS0040753 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 4.1e-41 172.2 119 68.9
GSVIVG01030051001 Vitis vinifera HOM05D005691 ORTHO05D007096 5.3e-41 171.8 119 69.7
FAN05G1189 Fragaria x ananassa HOM05D005691 ORTHO05D007096 6.9e-41 171.4 119 69.7
MD17G1113600 Malus domestica HOM05D005691 ORTHO05D007096 6.9e-41 171.4 119 70.6
Glyma.02G305200 Glycine max HOM05D005691 ORTHO05D007096 9.1e-41 171.0 119 68.9
Glyma.14G008200 Glycine max HOM05D005691 ORTHO05D007096 9.1e-41 171.0 119 68.9
vmacro09398 Vaccinium macrocarpon HOM05D005691 ORTHO05D007096 9.1e-41 171.0 119 67.2
QL08p028494 Quercus lobata HOM05D005691 ORTHO05D007096 1.2e-40 170.6 119 68.9
Thecc.01G191500 Theobroma cacao HOM05D005691 ORTHO05D007096 2.0e-40 169.9 119 68.9
FAN02G1659 Fragaria x ananassa HOM05D005691 ORTHO05D007096 2.6e-40 169.5 119 68.1
FAN09G3499 Fragaria x ananassa HOM05D005691 ORTHO05D007096 2.6e-40 169.5 119 68.9
Phvul.008G284900 Phaseolus vulgaris HOM05D005691 ORTHO05D007096 2.6e-40 169.5 119 67.2
VMungo0647G0393 Vigna mungo HOM05D005691 ORTHO05D007096 2.6e-40 169.5 119 68.9
FvH4_6g40930 Fragaria vesca HOM05D005691 ORTHO05D007096 4.5e-40 168.7 119 68.1
Hund01594 Selenicereus undatus HOM05D005691 ORTHO05D007096 7.7e-40 167.9 119 67.2
TPR.G1235 Trifolium pratense HOM05D005691 ORTHO05D007096 7.7e-40 167.9 119 68.9
FAN14G0170 Fragaria x ananassa HOM05D005691 ORTHO05D007096 1.0e-39 167.5 119 67.2
Ca_06452_v3 Cicer arietinum L. HOM05D005691 ORTHO05D007096 1.3e-39 167.2 119 68.1
CsaV3_7G002600 Cucumis sativus L. HOM05D005691 ORTHO05D007096 1.7e-39 166.8 119 69.7
Lj8A134T75 Lonicera japonica HOM05D005691 ORTHO05D007096 1.7e-39 166.8 119 65.5
Lalb_Chr10g0107611 Lupinus albus HOM05D005691 ORTHO05D007096 2.2e-39 166.4 119 68.1
Medtr5g097260 Medicago truncatula HOM05D005691 ORTHO05D007096 2.2e-39 166.4 119 68.9
MELO3C024202.2 Cucumis melo HOM05D005691 ORTHO05D007096 3.8e-39 165.6 119 68.9
Manes.12G061100 Manihot esculenta HOM05D005691 ORTHO05D007096 5.0e-39 165.2 119 66.4
Psat2g005000 Pisum sativum HOM05D005691 ORTHO05D007096 5.0e-39 165.2 119 68.1
arahy.Tifrunner.gnm1.ann1.2CK2M8 Arachis hypogaea HOM05D005691 ORTHO05D007096 6.5e-39 164.9 119 67.2
arahy.Tifrunner.gnm1.ann1.5BD1HA Arachis hypogaea HOM05D005691 ORTHO05D007096 6.5e-39 164.9 119 67.2
Hma1.2p1_0133F.1_g061370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 6.5e-39 164.9 119 64.7
Hma1.2p1_0133F.1_g061380 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 6.5e-39 164.9 119 64.7
Nn1g07449 Nelumbo nucifera HOM05D005691 ORTHO05D007096 8.5e-39 164.5 117 65.8
Potri.002G221300 Populus trichocarpa HOM05D005691 ORTHO05D007096 8.5e-39 164.5 119 68.1
PGR042G3586 Punica granatum HOM05D005691 ORTHO05D007096 8.5e-39 164.5 119 68.1
Rhsim04G0038700 Rhododendron simsii HOM05D005691 ORTHO05D007096 8.5e-39 164.5 119 64.7
ClCG02G002780 Citrullus lanatus HOM05D005691 ORTHO05D007096 1.4e-38 163.7 119 67.2
Ciclev10014054m.g Citrus clementina HOM05D005691 ORTHO05D007096 1.4e-38 163.7 119 67.2
Sed0003649 Sechium edule HOM05D005691 ORTHO05D007096 2.5e-38 162.9 119 68.1
CiPaw.03G279200 Carya illinoinensis HOM05D005691 ORTHO05D007096 3.2e-38 162.5 119 68.9
AUR62015058 Chenopodium quinoa HOM05D005691 ORTHO05D007096 4.2e-38 162.2 119 65.5
Sabra02G0169100 Salix brachista HOM05D005691 ORTHO05D007096 7.2e-38 161.4 119 67.2
TAR626G1898 Trochodendron aralioides HOM05D005691 ORTHO05D007096 2.7e-37 159.5 117 65.0
Haze_12684 Corylus avellana HOM05D005691 ORTHO05D007096 3.6e-37 159.1 119 68.1
AUR62017514 Chenopodium quinoa HOM05D005691 ORTHO05D007096 4.7e-37 158.7 119 64.7
Aqoxy4G02218 Aquilegia oxysepala HOM05D005691 ORTHO05D007096 1.0e-36 157.5 118 60.2
Eucgr.A01048 Eucalyptus grandis HOM05D005691 ORTHO05D007096 1.0e-36 157.5 119 63.0
MSTRG.6644 Avicennia marina HOM05D005691 ORTHO05D007096 1.8e-36 156.8 119 63.9
TWI18G1215 Tripterygium wilfordii HOM05D005691 ORTHO05D007096 2.3e-36 156.4 119 63.0
Sc21g0000790 Simmondsia chinensis HOM05D005691 ORTHO05D007096 3.0e-36 156.0 119 63.0
Migut.M00032 Erythranthe guttata HOM05D005691 ORTHO05D007096 8.8e-36 154.5 119 63.9
PSO675G5893 Papaver somniferum HOM05D005691 ORTHO05D007096 8.8e-36 154.5 117 63.2
EL10Ac9g22718 Beta vulgaris HOM05D005691 ORTHO05D007096 4.4e-35 152.1 119 62.2
Cc00_g04460 Coffea canephora HOM05D005691 ORTHO05D007096 5.7e-35 151.8 119 61.3
Oeu029977.1 Olea europaea HOM05D005691 ORTHO05D007096 5.7e-35 151.8 119 63.9
MBI16_g26390_MAGBIO Magnolia biondii HOM05D005691 ORTHO05D007096 2.8e-34 149.4 118 57.6
ECA240G2675 Erigeron canadensis HOM05D005691 ORTHO05D007096 6.3e-34 148.3 119 59.7
Nitab4.5_0009877g0010 Nicotiana tabacum HOM05D005691 ORTHO05D007096 1.4e-33 147.1 119 61.3
HanXRQChr03g0075241 Helianthus annuus HOM05D005691 ORTHO05D007096 3.1e-33 146.0 119 61.3
Nitab4.5_0000441g0080 Nicotiana tabacum HOM05D005691 ORTHO05D007096 5.3e-33 145.2 143 53.8
DCAR_019708 Daucus carota HOM05D005691 ORTHO05D007096 9.1e-33 144.4 163 51.5
Sopen07g024300 Solanum pennellii HOM05D005691 ORTHO05D007096 1.2e-32 144.1 119 59.7
Peaxi162Scf00776g00233 Petunia axillaris HOM05D005691 ORTHO05D007096 2.0e-32 143.3 119 61.3
PGSC0003DMG400006150 Solanum tuberosum HOM05D005691 ORTHO05D007096 2.0e-32 143.3 119 59.7
Solyc07g047860.4 Solanum lycopersicum HOM05D005691 ORTHO05D007096 3.5e-32 142.5 119 58.8
SGA_v2.0_scaffold73G24511 Striga asiatica HOM05D005691 ORTHO05D007096 4.5e-32 142.1 119 60.5
Lsat_1_v5_gn_9_104801 Lactuca sativa HOM05D005691 ORTHO05D007096 1.0e-31 141.0 120 59.2
SGA_v2.0_scaffold292G47412 Striga asiatica HOM05D005691 ORTHO05D007096 1.0e-31 141.0 120 60.8
SGA_v2.0_scaffold292G47401 Striga asiatica HOM05D005691 ORTHO05D007096 1.7e-31 140.2 119 59.7
Os03g0225500 Oryza sativa ssp. japonica HOM05D005691 ORTHO05D007096 3.8e-31 139.0 118 56.8
SalBow7G1588 Salvia bowleyana HOM05D005691 ORTHO05D007096 3.8e-31 139.0 120 58.3
CDE04G3337 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 1.1e-30 137.5 117 57.3
CAN.G854.9 Capsicum annuum HOM05D005691 ORTHO05D007096 7.2e-30 134.8 119 58.0
ATR1149G135 Amborella trichopoda HOM05D005691 ORTHO05D007096 2.3e-28 129.8 118 50.8
Zm00001eb399630 Zea mays HOM05D005691 ORTHO05D007096 4.0e-28 129.0 118 54.2
SHI10144 Sapria himalayana HOM05D005691 ORTHO05D007096 4.4e-27 125.6 119 56.3
SEGI_38606 Sequoiadendron giganteum HOM05D005691 ORTHO05D007096 7.7e-24 114.8 117 47.9
Mapoly0061s0124 Marchantia polymorpha HOM05D005691 ORTHO05D007096 3.8e-23 112.5 118 44.9
Pp3c21_14430 Physcomitrium patens HOM05D005691 ORTHO05D007096 5.5e-22 108.6 122 44.3
SMO351G0158 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 1.1e-17 94.4 115 39.1
AagrBONN_evm.TU.Sc2ySwM_362.2878 Anthoceros agrestis HOM05D005691 ORTHO05D007096 3.1e-17 92.8 126 41.3
SMO351G0109 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 8.0e-13 78.2 98 38.8
CBR_g39814 Chara braunii HOM05D005691 ORTHO05D007096 7.5e-11 71.6 86 40.7


User provided reference genes

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