Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p43920 Brassica napus HOM05D007954 ORTHO05D010124 9.3e-84 313.5 162 100.0
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 2.3e-74 282.3 225 71.6
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 2.7e-67 258.8 225 64.9
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 2.5e-60 235.7 223 60.1
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 4.2e-60 235.0 223 60.1
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 5.0e-53 211.5 117 87.2
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 5.0e-53 211.5 117 87.2
BcaC08g46483 Brassica carinata HOM05D007954 ORTHO05D010124 7.2e-52 207.6 114 86.8
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 7.2e-52 207.6 114 86.8
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.5e-49 199.9 117 83.8
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 1.3e-48 196.8 117 80.3
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 2.8e-48 195.7 179 60.9
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 3.7e-48 195.3 117 81.2
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 3.7e-48 195.3 117 79.5
A07p36450 Brassica napus HOM05D007954 ORTHO05D010124 1.1e-44 183.7 104 84.6
BcaB03g14800 Brassica carinata HOM05D007954 ORTHO05D010124 5.7e-41 171.4 89 91.0
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.0e-38 162.9 115 67.0
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.7e-37 159.8 117 64.1
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 6.5e-37 157.9 117 65.0
BraA07t31245Z Brassica rapa HOM05D007954 ORTHO05D010124 1.9e-36 156.4 91 80.2
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 9.4e-36 154.1 117 65.0
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 6.1e-35 151.4 118 60.2
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 6.1e-35 151.4 118 60.2
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.6e-33 146.0 135 60.0
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 4.4e-33 145.2 113 63.7
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.7e-32 143.3 117 55.6
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 2.2e-32 142.9 119 58.8
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 2.2e-32 142.9 119 58.8
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 4.8e-32 141.7 119 57.1
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 4.8e-32 141.7 119 57.1
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 8.2e-32 141.0 120 57.5
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 1.6e-30 136.7 110 59.1
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 5.0e-29 131.7 102 62.7
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 1.9e-28 129.8 117 54.7
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 4.2e-28 128.6 117 53.0
A07p36600 Brassica napus HOM05D007954 ORTHO05D010124 2.3e-26 122.9 110 52.7
Thhalv10019602m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 2.3e-26 122.9 94 61.7
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.0e-26 122.5 115 53.0
BcaB03g14781 Brassica carinata HOM05D000629 ORTHO05D000576 1.5e-25 120.2 103 65.0
BraA06t27739Z Brassica rapa HOM05D007954 ORTHO05D010124 1.4e-23 113.6 117 47.0
CARHR215600 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.8e-23 113.2 127 48.0
BcaNung01945 Brassica carinata HOM05D007954 ORTHO05D010124 2.4e-23 112.8 116 50.0
A06p48730 Brassica napus HOM05D007954 ORTHO05D010124 2.4e-23 112.8 112 50.9
BcaNung01944 Brassica carinata HOM05D007954 ORTHO05D010124 3.1e-23 112.5 117 47.9
C07p63390 Brassica napus HOM05D007954 ORTHO05D010124 3.1e-23 112.5 117 47.9
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 7.0e-23 111.3 111 50.5
Carub.0002s1679 Capsella rubella HOM05D007954 ORTHO05D010124 2.0e-22 109.8 117 52.1
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 3.5e-22 109.0 92 66.3
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 7.7e-22 107.8 128 47.7
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 1.7e-21 106.7 128 47.7
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 1.7e-21 106.7 128 47.7
AT3G54410 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 5.0e-21 105.1 91 59.3
C02p27290 Brassica napus HOM05D007954 ORTHO05D010124 1.1e-20 104.0 80 61.2
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 1.9e-20 103.2 128 46.1
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 2.5e-20 102.8 115 45.2
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 1.6e-19 100.1 128 45.3
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 2.1e-19 99.8 114 43.0
C06p43870 Brassica napus HOM05D007954 ORTHO05D010124 2.1e-19 99.8 125 42.4
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 2.1e-19 99.8 114 43.0
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 1.0e-18 97.4 111 46.8
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.0e-18 95.9 111 45.0
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 2.6e-17 92.8 112 42.0
AL2G29390 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.3e-16 90.5 84 48.8
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 1.3e-16 90.5 93 49.5
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.7e-16 89.0 106 44.3
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 3.7e-16 89.0 100 50.0
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 4.8e-16 88.6 112 45.5
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 1.1e-15 87.4 78 57.7
BcaB03g15524 Brassica carinata HOM05D007954 ORTHO05D010124 2.4e-15 86.3 111 41.4
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 3.1e-15 85.9 106 45.3
AL2G29260 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.5e-12 76.3 89 43.8
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 2.1e-11 73.2 68 55.9
CARHR263070 Cardamine hirsuta HOM05D007954 ORTHO05D010124 4.0e-10 68.9 56 50.0
BraA07t31226Z Brassica rapa HOM05D007954 ORTHO05D010124 6.8e-10 68.2 61 52.5
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 3.4e-09 65.9 64 46.9


User provided reference genes

Program Settings