Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p43250 Brassica napus HOM05D015564 ORTHO05D017498 6.5e-44 180.3 86 100.0
BcaC09g50490 Brassica carinata HOM05D015564 ORTHO05D017498 5.0e-36 154.1 73 97.3
C05p49920 Brassica napus HOM05D015564 ORTHO05D017498 6.3e-31 137.1 64 100.0
A06p23420 Brassica napus HOM05D015564 ORTHO05D017498 2.2e-28 128.6 83 78.3
A05p23760 Brassica napus HOM05D015564 ORTHO05D017498 3.2e-27 124.8 64 92.2
C07p06390 Brassica napus HOM05D015564 ORTHO05D017498 1.4e-25 119.4 63 92.1
BcaC06g31200 Brassica carinata HOM05D000442 ORTHO05D001979 4.5e-13 77.8 40 90.0
C07p33660 Brassica napus HOM05D000442 ORTHO05D001979 4.5e-13 77.8 40 90.0
BolC7t43876H Brassica oleracea HOM05D000442 ORTHO05D001979 1.3e-12 76.3 40 87.5
BraA05t21244Z Brassica rapa HOM05D015564 ORTHO05D017498 8.6e-12 73.6 38 94.7
A06p43290 Brassica napus HOM05D000442 ORTHO05D001979 1.9e-11 72.4 40 85.0
BraA06t27215Z Brassica rapa HOM05D000442 ORTHO05D001979 1.9e-11 72.4 40 85.0
Carub.0005s0194 Capsella rubella HOM05D000442 ORTHO05D001979 7.2e-11 70.5 40 85.0
AL5G12760 Arabidopsis lyrata HOM05D000442 ORTHO05D001979 2.8e-10 68.6 40 82.5
BcaC05g25314 Brassica carinata HOM05D000442 ORTHO05D001979 2.8e-10 68.6 40 77.5
CARHR145450 Cardamine hirsuta HOM05D000442 ORTHO05D001979 3.6e-10 68.2 40 82.5
AL1G26040 Arabidopsis lyrata HOM05D000442 ORTHO05D001979 4.7e-10 67.8 40 77.5
A06p10160 Brassica napus HOM05D000442 ORTHO05D001979 4.7e-10 67.8 40 77.5
A09p62410 Brassica napus HOM05D000442 ORTHO05D001979 4.7e-10 67.8 40 77.5
C05p11940 Brassica napus HOM05D000442 ORTHO05D001979 4.7e-10 67.8 40 77.5
BolC5t29944H Brassica oleracea HOM05D000442 ORTHO05D001979 4.7e-10 67.8 40 77.5
BolC5t29951H Brassica oleracea HOM05D000442 ORTHO05D001979 4.7e-10 67.8 40 77.5
BraA06t24200Z Brassica rapa HOM05D000442 ORTHO05D001979 4.7e-10 67.8 40 77.5
BraA09t41605Z Brassica rapa HOM05D000442 ORTHO05D001979 4.7e-10 67.8 40 77.5
Thhalv10004222m.g Eutrema salsugineum HOM05D000442 ORTHO05D001979 4.7e-10 67.8 40 77.5
BcaB08g34373 Brassica carinata HOM05D000442 ORTHO05D001979 6.1e-10 67.4 40 75.0
C08p45970 Brassica napus HOM05D000442 ORTHO05D001979 6.1e-10 67.4 40 77.5
BolC8t52148H Brassica oleracea HOM05D000442 ORTHO05D001979 6.1e-10 67.4 40 77.5
Thhalv10006996m.g Eutrema salsugineum HOM05D000442 ORTHO05D001979 6.1e-10 67.4 40 77.5
AT1G14170 Arabidopsis thaliana HOM05D000442 ORTHO05D001979 1.0e-09 66.6 40 75.0
Carub.0001s1384 Capsella rubella HOM05D000442 ORTHO05D001979 1.4e-09 66.2 40 75.0
Sp1g12510 Schrenkiella parvula HOM05D000442 ORTHO05D001979 1.4e-09 66.2 40 75.0
BcaC07g41596 Brassica carinata HOM05D000442 ORTHO05D001979 4.0e-09 64.7 40 72.5
Aa31LG1G920 Aethionema arabicum HOM05D000442 ORTHO05D001979 5.2e-09 64.3 40 75.0
Aa31LG2G7310 Aethionema arabicum HOM05D000442 ORTHO05D001979 8.9e-09 63.5 40 77.5
CARHR014570 Cardamine hirsuta HOM05D000442 ORTHO05D001979 1.5e-08 62.8 40 72.5
Atru.chr11.1759 Acer truncatum HOM05D000442 ORTHO05D001979 9.8e-08 60.1 39 66.7
BcaB02g06517 Brassica carinata HOM05D000442 ORTHO05D001979 1.7e-07 59.3 39 71.8
Potri.010G167100 Populus trichocarpa HOM05D000442 ORTHO05D001979 1.7e-07 59.3 40 62.5
BcaB01g05065 Brassica carinata HOM05D000442 ORTHO05D001979 2.2e-07 58.9 37 67.6
A03p07080 Brassica napus HOM05D000442 ORTHO05D001979 2.2e-07 58.9 37 67.6
C03p08060 Brassica napus HOM05D000442 ORTHO05D001979 2.2e-07 58.9 37 67.6
BolC3t13304H Brassica oleracea HOM05D000442 ORTHO05D001979 2.2e-07 58.9 37 67.6
BraA03t10030Z Brassica rapa HOM05D000442 ORTHO05D001979 2.2e-07 58.9 37 67.6
ECA233G4166 Erigeron canadensis HOM05D000442 ORTHO05D001979 2.2e-07 58.9 39 64.1
GSVIVG01019958001 Vitis vinifera HOM05D000442 ORTHO05D001979 2.2e-07 58.9 39 69.2
Psat3g200120 Pisum sativum HOM05D000442 ORTHO05D001979 2.8e-07 58.5 40 65.0
Ciclev10031267m.g Citrus clementina HOM05D000442 ORTHO05D001979 3.7e-07 58.2 39 66.7
Sabra08G0066200 Salix brachista HOM05D000442 ORTHO05D001979 4.9e-07 57.8 40 60.0
Sabra10G0126800 Salix brachista HOM05D000442 ORTHO05D001979 4.9e-07 57.8 40 57.5
TWI75G0379 Tripterygium wilfordii HOM05D000442 ORTHO05D001979 4.9e-07 57.8 39 64.1
Lj1g0018646 Lotus japonicus HOM05D000442 ORTHO05D001979 8.3e-07 57.0 37 73.0
Medtr7g011080 Medicago truncatula HOM05D000442 ORTHO05D001979 8.3e-07 57.0 56 48.2
Potri.008G088600 Populus trichocarpa HOM05D000442 ORTHO05D001979 1.1e-06 56.6 40 62.5
BcaB08g36908 Brassica carinata HOM05D000442 ORTHO05D001979 1.8e-06 55.8 37 70.3
CiPaw.04G015900 Carya illinoinensis HOM05D000442 ORTHO05D001979 1.8e-06 55.8 40 57.5
Cc11_g12790 Coffea canephora HOM05D000442 ORTHO05D001979 1.8e-06 55.8 39 61.5
Lalb_Chr02g0159291 Lupinus albus HOM05D000442 ORTHO05D001979 1.8e-06 55.8 39 59.0
Ca_04292_v3 Cicer arietinum L. HOM05D000442 ORTHO05D001979 2.4e-06 55.5 43 58.1
Haze_14509 Corylus avellana HOM05D000442 ORTHO05D001979 2.4e-06 55.5 40 57.5
Hma1.2p1_0750F.1_g212680 Hydrangea macrophylla HOM05D000442 ORTHO05D001979 2.4e-06 55.5 40 60.0
CiPaw.03G024900 Carya illinoinensis HOM05D000442 ORTHO05D001979 3.1e-06 55.1 40 60.0
DCAR_031004 Daucus carota HOM05D000442 ORTHO05D001979 3.1e-06 55.1 40 60.0
MBI02_g12269_MAGBIO Magnolia biondii HOM05D000442 ORTHO05D001979 5.4e-06 54.3 41 53.7
Nn4g23214 Nelumbo nucifera HOM05D000442 ORTHO05D001979 5.4e-06 54.3 40 55.0
TPR.G33608 Trifolium pratense HOM05D000442 ORTHO05D001979 5.4e-06 54.3 40 62.5
Eucgr.J01359 Eucalyptus grandis HOM05D000442 ORTHO05D001979 7.0e-06 53.9 58 39.7
Manes.01G034300 Manihot esculenta HOM05D000442 ORTHO05D001979 7.0e-06 53.9 39 59.0
Phvul.008G037700 Phaseolus vulgaris HOM05D000442 ORTHO05D001979 7.0e-06 53.9 39 64.1
Sp6g28800 Schrenkiella parvula HOM05D000442 ORTHO05D001979 7.0e-06 53.9 34 67.6
TPR.G8798 Trifolium pratense HOM05D000442 ORTHO05D001979 7.0e-06 53.9 43 55.8
COL.COLO4_22942 Corchorus olitorius HOM05D000442 ORTHO05D001979 9.2e-06 53.5 39 59.0
TWI34G0700 Tripterygium wilfordii HOM05D000442 ORTHO05D001979 9.2e-06 53.5 39 61.5
VMungo1383G3039 Vigna mungo HOM05D000442 ORTHO05D001979 9.2e-06 53.5 39 64.1


User provided reference genes

Program Settings