Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 4.4e-96 354.8 196 100.0
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 3.1e-94 348.6 196 98.5
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 9.1e-94 347.1 196 98.0
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 3.8e-92 341.7 196 96.4
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 3.4e-88 328.6 196 94.4
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 6.6e-84 314.3 196 87.8
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 1.9e-83 312.8 196 91.3
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 1.3e-79 300.1 204 82.8
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 1.6e-77 293.1 204 82.8
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 1.3e-76 290.0 204 82.8
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 2.3e-76 289.3 204 82.4
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 2.3e-76 289.3 204 82.4
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 3.0e-76 288.9 204 82.4
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 3.0e-76 288.9 204 82.4
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 3.0e-76 288.9 204 82.4
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 3.9e-76 288.5 204 81.9
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 3.9e-76 288.5 204 82.4
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 3.9e-76 288.5 204 82.4
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 8.0e-74 280.8 205 81.0
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 6.8e-73 277.7 196 81.6
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 3.9e-68 261.9 192 79.2
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 3.5e-61 238.8 200 71.5
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 1.2e-58 230.3 194 72.2
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 1.2e-58 230.3 194 72.7
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 2.6e-56 222.6 194 70.1
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 3.4e-56 222.2 201 70.6
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 3.8e-47 192.2 207 57.5
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 4.9e-47 191.8 203 60.6
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 7.1e-46 188.0 207 59.4
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 2.1e-45 186.4 211 56.9
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 3.5e-45 185.7 207 57.0
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 4.6e-45 185.3 208 56.2
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 1.3e-44 183.7 206 54.4
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 1.7e-44 183.3 197 56.9
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 3.0e-44 182.6 204 57.8
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 3.9e-44 182.2 212 55.7
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 3.9e-44 182.2 209 59.3
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.9e-44 182.2 209 59.3
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 5.1e-44 181.8 208 59.6
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 8.7e-44 181.0 208 56.2
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 8.7e-44 181.0 210 57.6
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 8.7e-44 181.0 210 56.2
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 8.7e-44 181.0 204 56.4
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 1.1e-43 180.6 210 56.2
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 1.1e-43 180.6 210 53.8
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 1.9e-43 179.9 205 55.6
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.3e-43 179.1 208 58.7
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.3e-43 179.1 208 58.7
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 4.3e-43 178.7 201 57.7
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 4.3e-43 178.7 198 57.1
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 4.3e-43 178.7 205 56.1
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 5.6e-43 178.3 207 53.1
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 5.6e-43 178.3 199 56.3
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 7.3e-43 177.9 203 57.6
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 7.3e-43 177.9 202 55.0
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 9.6e-43 177.6 207 57.5
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 1.3e-42 177.2 208 54.8
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 1.6e-42 176.8 210 54.3
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 1.6e-42 176.8 210 53.8
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 1.6e-42 176.8 208 53.8
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 2.8e-42 176.0 212 58.0
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 4.8e-42 175.3 202 57.4
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 4.8e-42 175.3 204 55.9
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.8e-42 175.3 208 58.2
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 6.2e-42 174.9 210 55.2
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 6.2e-42 174.9 205 55.6
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 1.1e-41 174.1 212 55.2
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 1.4e-41 173.7 206 55.3
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 1.4e-41 173.7 211 52.1
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 1.4e-41 173.7 210 55.7
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 1.4e-41 173.7 210 55.7
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 1.4e-41 173.7 206 55.8
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 1.8e-41 173.3 203 56.2
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 1.8e-41 173.3 207 52.7
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 2.4e-41 172.9 202 55.0
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 3.1e-41 172.6 210 55.2
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 4.0e-41 172.2 200 58.5
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 4.0e-41 172.2 212 55.7
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 4.0e-41 172.2 207 55.6
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 6.9e-41 171.4 206 54.4
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 6.9e-41 171.4 199 56.3
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 9.0e-41 171.0 202 56.9
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 9.0e-41 171.0 155 67.7
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 2.0e-40 169.9 206 57.3
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 2.6e-40 169.5 198 59.6
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 3.4e-40 169.1 198 58.6
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 3.4e-40 169.1 212 52.8
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 3.4e-40 169.1 211 53.1
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 4.5e-40 168.7 204 52.9
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 4.5e-40 168.7 212 53.3
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 4.5e-40 168.7 212 53.8
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 5.8e-40 168.3 206 55.3
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 7.6e-40 167.9 207 55.1
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 7.6e-40 167.9 199 57.8
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 7.6e-40 167.9 211 51.7
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 7.6e-40 167.9 198 55.1
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 9.9e-40 167.5 207 53.6
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 9.9e-40 167.5 206 53.4
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 9.9e-40 167.5 202 54.5
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 1.3e-39 167.2 199 53.8
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 1.3e-39 167.2 211 54.0
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.7e-39 166.8 191 56.0
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 1.7e-39 166.8 212 51.9
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 2.2e-39 166.4 193 55.4
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 2.2e-39 166.4 200 57.0
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.9e-39 166.0 208 52.9
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 3.8e-39 165.6 223 52.5
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 4.9e-39 165.2 204 54.9
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 6.4e-39 164.9 206 54.4
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 6.4e-39 164.9 206 53.4
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 8.4e-39 164.5 210 52.4
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 8.4e-39 164.5 204 56.9
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 8.4e-39 164.5 207 54.6
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 1.1e-38 164.1 203 54.7
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 1.1e-38 164.1 207 55.6
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 1.4e-38 163.7 206 53.9
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 5.4e-38 161.8 183 54.6
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 5.4e-38 161.8 208 53.4
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 7.1e-38 161.4 205 50.2
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 7.1e-38 161.4 216 52.8
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 7.1e-38 161.4 204 53.4
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 9.3e-38 161.0 201 54.2
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 1.2e-37 160.6 213 53.1
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 1.6e-37 160.2 212 52.4
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 1.0e-36 157.5 193 56.0
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 1.3e-36 157.1 164 60.4
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 6.7e-36 154.8 214 51.4
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 8.7e-36 154.5 214 51.4
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 1.1e-35 154.1 207 50.7
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 1.5e-35 153.7 204 52.0
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 9.0e-33 144.4 209 51.2
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 4.5e-32 142.1 153 56.2
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 1.7e-31 140.2 149 55.7
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 1.7e-31 140.2 169 55.0
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 1.6e-29 133.7 159 56.0
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 1.6e-29 133.7 117 64.1
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 2.5e-27 126.3 150 51.3
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 2.1e-26 123.2 150 52.7
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 6.2e-26 121.7 149 49.0
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 6.2e-26 121.7 177 50.3
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 1.1e-25 120.9 150 50.7
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 1.2e-24 117.5 183 48.1
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 3.4e-24 115.9 178 46.6
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 3.8e-23 112.5 155 47.7
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.8e-20 103.6 201 37.8
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 3.7e-18 95.9 143 48.3
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 1.4e-17 94.0 148 45.9
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 2.0e-16 90.1 199 39.7
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.6e-16 89.7 174 43.7
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 1.3e-15 87.4 78 65.4
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 1.1e-14 84.3 127 44.1
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 2.1e-13 80.1 124 46.0
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 6.1e-13 78.6 97 53.6
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 6.7e-12 75.1 118 43.2
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 8.8e-12 74.7 145 41.4
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 5.7e-11 72.0 138 44.2
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 6.3e-10 68.6 66 60.6
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 6.3e-10 68.6 60 63.3
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 2.0e-08 63.5 103 38.8
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 3.2e-06 56.2 146 36.3


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