Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 6.2e-52 207.2 108 100.0
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 6.2e-52 207.2 108 100.0
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 5.1e-46 187.6 102 94.1
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 1.8e-43 179.1 98 94.9
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 3.1e-43 178.3 108 88.0
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 1.5e-42 176.0 108 87.0
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 6.5e-41 170.6 92 96.7
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 6.5e-41 170.6 92 96.7
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 1.4e-40 169.5 92 94.6
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 5.5e-40 167.5 92 92.4
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 1.2e-39 166.4 92 92.4
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 7.9e-39 163.7 92 91.3
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 5.1e-38 161.0 92 89.1
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 1.4e-35 152.9 92 83.7
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 2.9e-33 145.2 92 88.0
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 3.3e-29 131.7 73 91.8
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 1.8e-27 125.9 92 77.2
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 7.2e-24 114.0 84 66.7
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 7.2e-24 114.0 84 66.7
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 7.2e-24 114.0 84 66.7
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 1.6e-23 112.8 82 68.3
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 4.7e-23 111.3 82 65.9
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 4.7e-23 111.3 82 65.9
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 6.1e-23 110.9 88 61.4
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 1.0e-22 110.2 84 63.1
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 1.0e-22 110.2 84 63.1
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 1.0e-22 110.2 83 63.9
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 1.0e-22 110.2 82 65.9
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 1.0e-22 110.2 82 65.9
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 2.3e-22 109.0 84 64.3
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 3.9e-22 108.2 89 61.8
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 3.9e-22 108.2 84 61.9
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 3.9e-22 108.2 84 61.9
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 3.9e-22 108.2 82 63.4
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 5.1e-22 107.8 82 63.4
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 5.1e-22 107.8 82 65.9
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 6.7e-22 107.5 84 63.1
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 6.7e-22 107.5 84 64.3
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 6.7e-22 107.5 89 60.7
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 6.7e-22 107.5 90 58.9
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 8.8e-22 107.1 82 63.4
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 8.8e-22 107.1 82 67.1
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 1.1e-21 106.7 90 57.8
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 1.5e-21 106.3 89 60.7
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 1.5e-21 106.3 82 61.0
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 2.0e-21 105.9 82 61.0
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 2.6e-21 105.5 82 63.4
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 3.3e-21 105.1 85 61.2
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 3.3e-21 105.1 82 63.4
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 4.4e-21 104.8 88 58.0
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 5.7e-21 104.4 82 61.0
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 5.7e-21 104.4 82 58.5
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 7.4e-21 104.0 79 64.6
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 7.4e-21 104.0 79 64.6
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 7.4e-21 104.0 88 56.8
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 9.7e-21 103.6 82 62.2
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 9.7e-21 103.6 85 60.0
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.3e-20 103.2 82 62.2
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 1.7e-20 102.8 82 61.0
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 1.7e-20 102.8 84 58.3
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.7e-20 102.8 85 60.0
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 2.2e-20 102.4 84 58.3
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 2.2e-20 102.4 82 61.0
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 2.2e-20 102.4 82 62.2
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 2.8e-20 102.1 87 57.5
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 2.8e-20 102.1 78 64.1
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 3.7e-20 101.7 87 62.1
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 4.8e-20 101.3 82 59.8
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 6.3e-20 100.9 82 59.8
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 6.3e-20 100.9 82 59.8
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 1.1e-19 100.1 82 58.5
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.1e-19 100.1 82 59.8
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 1.1e-19 100.1 88 53.4
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.4e-19 99.8 82 59.8
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.8e-19 99.4 82 59.8
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 1.8e-19 99.4 82 58.5
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.8e-19 99.4 82 58.5
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 1.8e-19 99.4 78 62.8
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 3.1e-19 98.6 81 58.0
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 3.1e-19 98.6 81 56.8
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 5.3e-19 97.8 87 60.9
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 5.3e-19 97.8 82 57.3
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 5.3e-19 97.8 82 58.5
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 5.3e-19 97.8 86 55.8
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 6.9e-19 97.4 82 54.9
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 9.1e-19 97.1 82 58.5
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 2.0e-18 95.9 81 55.6
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 2.0e-18 95.9 82 54.9
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 2.0e-18 95.9 81 55.6
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 2.6e-18 95.5 81 55.6
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 2.6e-18 95.5 86 52.3
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 4.5e-18 94.7 82 56.1
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 5.9e-18 94.4 82 56.1
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 5.9e-18 94.4 84 52.4
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 7.7e-18 94.0 78 59.0
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 1.0e-17 93.6 78 59.0
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 1.3e-17 93.2 82 54.9
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 1.3e-17 93.2 82 54.9
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.3e-17 93.2 83 54.2
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 2.2e-17 92.4 82 54.9
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 2.9e-17 92.0 82 53.7
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 6.5e-17 90.9 82 53.7
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 8.5e-17 90.5 70 61.4
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 1.1e-16 90.1 69 63.8
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 1.4e-16 89.7 82 52.4
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 1.4e-16 89.7 84 50.0
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 1.9e-16 89.4 79 57.0
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.2e-15 86.7 82 50.0
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 1.2e-15 86.7 85 49.4
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.5e-13 79.7 77 49.4
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 1.4e-11 73.2 67 53.7
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 1.8e-11 72.8 85 42.4
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 1.2e-10 70.1 57 56.1
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 7.7e-10 67.4 82 43.9
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 1.7e-09 66.2 47 66.0
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 8.5e-09 63.9 66 51.5
C02p23080 Brassica napus HOM05D046150 ORTHO05D042944 1.9e-08 62.8 31 93.5
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 3.2e-08 62.0 56 57.1
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 4.2e-08 61.6 47 59.6
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 9.4e-08 60.5 56 53.6
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 2.7e-07 58.9 55 52.7
BolC2t08450H Brassica oleracea HOM05D046150 ORTHO05D042944 4.7e-07 58.2 31 87.1
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 8.8e-06 53.9 108 34.3


User provided reference genes

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