Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p22820 Brassica napus HOM05D000787 ORTHO05D101550 8.3e-31 136.3 66 100.0
C04p20570 Brassica napus HOM05D000787 ORTHO05D100567 2.4e-30 134.8 66 98.5
C09p46480 Brassica napus HOM05D000787 ORTHO05D097583 7.0e-30 133.3 66 97.0
Carub.0002s2421 Capsella rubella HOM05D000787 ORTHO05D003730 2.3e-17 91.7 51 86.3
AL2G37530 Arabidopsis lyrata HOM05D000787 ORTHO05D003730 2.0e-16 88.6 51 84.3
AT1G77330 Arabidopsis thaliana HOM05D000787 ORTHO05D003730 2.0e-16 88.6 51 84.3
CARHR070820 Cardamine hirsuta HOM05D000787 ORTHO05D003730 2.0e-16 88.6 51 84.3
Sp5g32510 Schrenkiella parvula HOM05D000787 ORTHO05D003730 2.0e-16 88.6 51 84.3
BcaC08g45480 Brassica carinata HOM05D000787 ORTHO05D003730 2.6e-16 88.2 51 84.3
A07p28040 Brassica napus HOM05D000787 ORTHO05D003730 2.6e-16 88.2 51 84.3
C06p31310 Brassica napus HOM05D000787 ORTHO05D003730 2.6e-16 88.2 51 84.3
BolC6t38269H Brassica oleracea HOM05D000787 ORTHO05D003730 2.6e-16 88.2 51 84.3
BraA07t30448Z Brassica rapa HOM05D000787 ORTHO05D003730 2.6e-16 88.2 51 84.3
Thhalv10018919m.g Eutrema salsugineum HOM05D000787 ORTHO05D003730 2.6e-16 88.2 51 82.4
BcaB02g07103 Brassica carinata HOM05D000787 ORTHO05D003730 7.5e-16 86.7 51 82.4
BcaC03g15731 Brassica carinata HOM05D000787 ORTHO05D003730 2.2e-15 85.1 51 82.4
A02p21220 Brassica napus HOM05D000787 ORTHO05D003730 2.2e-15 85.1 51 82.4
C02p34490 Brassica napus HOM05D000787 ORTHO05D003730 2.2e-15 85.1 51 82.4
BolC2t09479H Brassica oleracea HOM05D000787 ORTHO05D003730 2.2e-15 85.1 51 82.4
BraA02t07141Z Brassica rapa HOM05D000787 ORTHO05D003730 2.2e-15 85.1 51 82.4
THA.LOC104812086 Tarenaya hassleriana HOM05D000787 ORTHO05D003730 3.7e-15 84.3 51 78.4
BcaB05g25041 Brassica carinata HOM05D000787 ORTHO05D003730 8.3e-15 83.2 46 87.0
A07p42870 Brassica napus HOM05D000787 ORTHO05D003730 8.3e-15 83.2 52 82.7
BraA07t31808Z Brassica rapa HOM05D000787 ORTHO05D003730 8.3e-15 83.2 52 82.7
C06p51490 Brassica napus HOM05D000787 ORTHO05D003730 2.0e-13 78.6 53 79.2
Aa31LG4G7360 Aethionema arabicum HOM05D000787 ORTHO05D003730 1.7e-12 75.5 51 72.5
DCAR_014372 Daucus carota HOM05D000787 ORTHO05D003730 1.6e-10 68.9 52 69.2
Nitab4.5_0006116g0010 Nicotiana tabacum HOM05D000787 ORTHO05D003730 2.8e-10 68.2 51 64.7
Cpa.g.sc64.148 Carica papaya HOM05D000787 ORTHO05D003730 1.0e-09 66.2 51 66.7
Dinv27278 Davidia involucrata HOM05D000787 ORTHO05D003730 1.0e-09 66.2 51 64.7
Sc02g0004770 Simmondsia chinensis HOM05D000787 ORTHO05D003730 1.0e-09 66.2 51 66.7
Thecc.08G132600 Theobroma cacao HOM05D000787 ORTHO05D003730 1.0e-09 66.2 51 66.7
Actinidia29486 Actinidia chinensis HOM05D000787 ORTHO05D003730 1.8e-09 65.5 51 64.7
Peaxi162Scf00066g00009 Petunia axillaris HOM05D000787 ORTHO05D003730 1.8e-09 65.5 53 64.2
Sabra05G0138500 Salix brachista HOM05D000787 ORTHO05D003730 1.8e-09 65.5 51 66.7
CiPaw.16G023100 Carya illinoinensis HOM05D000787 ORTHO05D003730 3.1e-09 64.7 51 66.7
Lj7C349T10 Lonicera japonica HOM05D000787 ORTHO05D003730 4.0e-09 64.3 51 62.7
HPP92_004448 Vanilla planifolia HOM05D000787 ORTHO05D003730 4.0e-09 64.3 51 64.7
HPP92_004450 Vanilla planifolia HOM05D000787 ORTHO05D003730 4.0e-09 64.3 51 64.7
Eucgr.F03839 Eucalyptus grandis HOM05D000787 ORTHO05D003730 5.2e-09 63.9 53 64.2
Nitab4.5_0001168g0160 Nicotiana tabacum HOM05D000787 ORTHO05D003730 5.2e-09 63.9 51 56.9
vmacro00859 Vaccinium macrocarpon HOM05D000787 ORTHO05D003730 5.2e-09 63.9 51 62.7
EL10Ac1g01343 Beta vulgaris HOM05D000787 ORTHO05D003730 6.8e-09 63.5 54 59.3
DCAR_014440 Daucus carota HOM05D000787 ORTHO05D003730 6.8e-09 63.5 51 62.7
QL09p032570 Quercus lobata HOM05D000787 ORTHO05D003730 6.8e-09 63.5 52 67.3
TWI60G1646 Tripterygium wilfordii HOM05D000787 ORTHO05D003730 6.8e-09 63.5 51 68.6
GSVIVG01008811001 Vitis vinifera HOM05D000787 ORTHO05D003730 6.8e-09 63.5 51 66.7
FAN27G1808 Fragaria x ananassa HOM05D000787 ORTHO05D003730 8.9e-09 63.2 51 62.7
Glyma.06G117200 Glycine max HOM05D000787 ORTHO05D003730 8.9e-09 63.2 51 66.7
Nitab4.5_0002045g0080 Nicotiana tabacum HOM05D000787 ORTHO05D003730 8.9e-09 63.2 52 59.6
Cfa018125 Carpinus fangiana HOM05D000787 ORTHO05D003730 1.2e-08 62.8 51 64.7
AUR62013422 Chenopodium quinoa HOM05D000787 ORTHO05D003730 1.2e-08 62.8 53 60.4
Potri.005G182700 Populus trichocarpa HOM05D000787 ORTHO05D003730 1.2e-08 62.8 51 64.7
Sc02g0004750 Simmondsia chinensis HOM05D000787 ORTHO05D003730 1.2e-08 62.8 51 64.7
CAN.G531.5 Capsicum annuum HOM05D000787 ORTHO05D003730 1.5e-08 62.4 51 64.7
ClCG11G015950 Citrullus lanatus HOM05D000787 ORTHO05D003730 1.5e-08 62.4 51 60.8
ECA246G0211 Erigeron canadensis HOM05D000787 ORTHO05D003730 1.5e-08 62.4 51 62.7
MBI06_g35208_MAGBIO Magnolia biondii HOM05D000787 ORTHO05D003730 1.5e-08 62.4 51 62.7
Actinidia21283 Actinidia chinensis HOM05D000787 ORTHO05D003730 2.0e-08 62.0 51 66.7
AUR62007720 Chenopodium quinoa HOM05D000787 ORTHO05D003730 2.0e-08 62.0 53 58.5
Lsat_1_v5_gn_6_110060 Lactuca sativa HOM05D000787 ORTHO05D003730 2.0e-08 62.0 51 62.7
Lsat_1_v5_gn_6_110120 Lactuca sativa HOM05D000787 ORTHO05D003730 2.0e-08 62.0 51 66.7
Peaxi162Scf00051g00207 Petunia axillaris HOM05D000787 ORTHO05D003730 2.0e-08 62.0 51 60.8
Rhsim11G0071100 Rhododendron simsii HOM05D000787 ORTHO05D003730 2.0e-08 62.0 51 60.8
Sed0022023 Sechium edule HOM05D000787 ORTHO05D003730 2.0e-08 62.0 51 60.8
Hund26776 Selenicereus undatus HOM05D000787 ORTHO05D003730 2.0e-08 62.0 52 59.6
SGA_v2.0_scaffold24G10425 Striga asiatica HOM05D000787 ORTHO05D003730 2.0e-08 62.0 51 56.9
TAR376G0918 Trochodendron aralioides HOM05D000787 ORTHO05D003730 2.0e-08 62.0 51 64.7
Actinidia15218 Actinidia chinensis HOM05D000787 ORTHO05D003730 2.6e-08 61.6 51 66.7
FAN20G2693 Fragaria x ananassa HOM05D000787 ORTHO05D003730 2.6e-08 61.6 51 58.8
Lj1g0023012 Lotus japonicus HOM05D000787 ORTHO05D003730 2.6e-08 61.6 51 64.7
Oeu021886.1 Olea europaea HOM05D000787 ORTHO05D003730 2.6e-08 61.6 51 66.7
HPP92_004447 Vanilla planifolia HOM05D000787 ORTHO05D003730 2.6e-08 61.6 51 62.7
Ca_16605_v3 Cicer arietinum L. HOM05D000787 ORTHO05D003730 3.4e-08 61.2 51 62.7
CsaV3_4G028040 Cucumis sativus L. HOM05D000787 ORTHO05D003730 3.4e-08 61.2 51 60.8
CsaV3_UNG115910 Cucumis sativus L. HOM05D000787 ORTHO05D003730 3.4e-08 61.2 51 60.8
Glyma.04G245900 Glycine max HOM05D000787 ORTHO05D003730 3.4e-08 61.2 51 64.7
HanXRQChr05g0161411 Helianthus annuus HOM05D000787 ORTHO05D003730 3.4e-08 61.2 51 58.8
MD08G1160900 Malus domestica HOM05D000787 ORTHO05D003730 3.4e-08 61.2 51 62.7
Prupe.1G490000 Prunus persica HOM05D000787 ORTHO05D003730 3.4e-08 61.2 51 62.7
HPP92_004446 Vanilla planifolia HOM05D000787 ORTHO05D003730 3.4e-08 61.2 51 62.7
CSS0000425 Camellia sinensis var. sinensis HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 66.7
CSS0004829 Camellia sinensis var. sinensis HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 66.7
CSS0027544 Camellia sinensis var. sinensis HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 66.7
CSS0034471 Camellia sinensis var. sinensis HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 66.7
MELO3C010508.2 Cucumis melo HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 58.8
Dinv14677 Davidia involucrata HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 62.7
HanXRQChr05g0149301 Helianthus annuus HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 60.8
HanXRQChr11g0334761 Helianthus annuus HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 60.8
Lj7C348T1 Lonicera japonica HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 58.8
Lj7C349T11 Lonicera japonica HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 58.8
MBI03_g28483_MAGBIO Magnolia biondii HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 64.7
Phvul.009G129500 Phaseolus vulgaris HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 62.7
HPP92_004454 Vanilla planifolia HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 62.7
VMungo1309G0387 Vigna mungo HOM05D000787 ORTHO05D003730 4.4e-08 60.8 51 66.7
Duzib041G0586 Durio zibethinus HOM05D000787 ORTHO05D003730 5.8e-08 60.5 51 64.7
Gohir.D03G069001 Gossypium hirsutum HOM05D000787 ORTHO05D003730 5.8e-08 60.5 51 64.7
Gorai.013G107500 Gossypium raimondii HOM05D000787 ORTHO05D003730 5.8e-08 60.5 51 64.7
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.8e-08 60.5 50 62.0
Sed0026245 Sechium edule HOM05D000787 ORTHO05D003730 5.8e-08 60.5 51 60.8
Hund17338 Selenicereus undatus HOM05D000787 ORTHO05D003730 5.8e-08 60.5 54 59.3
Solyc06g060070.3 Solanum lycopersicum HOM05D000787 ORTHO05D003730 5.8e-08 60.5 51 60.8
Sopen06g020190 Solanum pennellii HOM05D000787 ORTHO05D003730 5.8e-08 60.5 51 60.8
TAR376G0754 Trochodendron aralioides HOM05D000787 ORTHO05D003730 5.8e-08 60.5 51 62.7
FvH4_2g27800 Fragaria vesca HOM05D000787 ORTHO05D003730 7.5e-08 60.1 51 60.8
FAN15G0494 Fragaria x ananassa HOM05D000787 ORTHO05D003730 7.5e-08 60.1 51 60.8
FAN24G0752 Fragaria x ananassa HOM05D000787 ORTHO05D003730 7.5e-08 60.1 51 60.8
PGSC0003DMG400006025 Solanum tuberosum HOM05D000787 ORTHO05D003730 7.5e-08 60.1 51 54.9
TAR223G0001 Trochodendron aralioides HOM05D000787 ORTHO05D003730 7.5e-08 60.1 51 64.7
ATR0584G035 Amborella trichopoda HOM05D000787 ORTHO05D003730 9.8e-08 59.7 51 60.8
Lj7C350T1 Lonicera japonica HOM05D000787 ORTHO05D003730 9.8e-08 59.7 51 62.7
HPP92_004451 Vanilla planifolia HOM05D000787 ORTHO05D003730 9.8e-08 59.7 67 50.7
Lj4A682T57 Lonicera japonica HOM05D000787 ORTHO05D003730 1.3e-07 59.3 51 62.7
Manes.02G168000 Manihot esculenta HOM05D000787 ORTHO05D003730 1.3e-07 59.3 51 60.8
Manes.18G082100 Manihot esculenta HOM05D000787 ORTHO05D003730 1.3e-07 59.3 51 62.7
Potri.002G078600 Populus trichocarpa HOM05D000787 ORTHO05D003730 1.3e-07 59.3 51 62.7
Sed0002529 Sechium edule HOM05D000787 ORTHO05D003730 1.3e-07 59.3 51 58.8
PGSC0003DMG400011776 Solanum tuberosum HOM05D000787 ORTHO05D003730 1.3e-07 59.3 51 58.8
CAN.G526.13 Capsicum annuum HOM05D000787 ORTHO05D003730 1.7e-07 58.9 51 56.9
Ciclev10001927m.g Citrus clementina HOM05D000787 ORTHO05D003730 1.7e-07 58.9 51 62.7
Duzib093G0135 Durio zibethinus HOM05D000787 ORTHO05D003730 1.7e-07 58.9 51 62.7
Gohir.A02G110200 Gossypium hirsutum HOM05D000787 ORTHO05D003730 1.7e-07 58.9 51 62.7
SGA_v2.0_scaffold28G11971 Striga asiatica HOM05D000787 ORTHO05D003730 1.7e-07 58.9 51 58.8
TAR628G1084 Trochodendron aralioides HOM05D000787 ORTHO05D003730 1.7e-07 58.9 51 62.7
Cc10_g12720 Coffea canephora HOM05D000787 ORTHO05D003730 2.2e-07 58.5 51 60.8
Duzib116G0015 Durio zibethinus HOM05D000787 ORTHO05D003730 2.2e-07 58.5 51 62.7
Gohir.A02G071300 Gossypium hirsutum HOM05D000787 ORTHO05D003730 2.2e-07 58.5 49 61.2
Psat5g084920 Pisum sativum HOM05D000787 ORTHO05D003730 2.2e-07 58.5 51 62.7
PGR042G3180 Punica granatum HOM05D000787 ORTHO05D003730 2.2e-07 58.5 51 60.8
CANSAT25G1960 Cannabis sativa HOM05D000787 ORTHO05D003730 2.9e-07 58.2 57 56.1
Gohir.A02G071400 Gossypium hirsutum HOM05D000787 ORTHO05D003730 2.9e-07 58.2 51 58.8
Lsat_1_v5_gn_6_110021 Lactuca sativa HOM05D000787 ORTHO05D003730 2.9e-07 58.2 51 64.7
Medtr3g088565 Medicago truncatula HOM05D000787 ORTHO05D003730 2.9e-07 58.2 52 61.5
SalBow2G2360 Salvia bowleyana HOM05D000787 ORTHO05D003730 2.9e-07 58.2 51 60.8
SalBow7G3734 Salvia bowleyana HOM05D000787 ORTHO05D003730 2.9e-07 58.2 51 56.9
SalBow7G3767 Salvia bowleyana HOM05D000787 ORTHO05D003730 2.9e-07 58.2 51 56.9
Nn1g08965 Nelumbo nucifera HOM05D000787 ORTHO05D003730 3.7e-07 57.8 51 60.8
RcHm_v2.0_Chr6g0296661 Rosa chinensis HOM05D000787 ORTHO05D003730 3.7e-07 57.8 51 56.9
Sabra02G0061500 Salix brachista HOM05D000787 ORTHO05D003730 4.9e-07 57.4 52 63.5
TPR.G13459 Trifolium pratense HOM05D000787 ORTHO05D003730 4.9e-07 57.4 51 60.8
COL.COLO4_08842 Corchorus olitorius HOM05D000787 ORTHO05D003730 6.4e-07 57.0 51 58.8
Oeu051975.1 Olea europaea HOM05D000787 ORTHO05D003730 6.4e-07 57.0 51 58.8
SGA_v2.0_scaffold28G11972 Striga asiatica HOM05D000787 ORTHO05D003730 6.4e-07 57.0 51 56.9
Atru.chr13.1558 Acer truncatum HOM05D000787 ORTHO05D003730 8.3e-07 56.6 51 58.8
Gohir.D02G078400 Gossypium hirsutum HOM05D000787 ORTHO05D003730 8.3e-07 56.6 49 59.2
Gorai.005G087900 Gossypium raimondii HOM05D000787 ORTHO05D003730 8.3e-07 56.6 49 59.2
Nn5g28432 Nelumbo nucifera HOM05D000787 ORTHO05D003730 8.3e-07 56.6 51 58.8
SalBow7G3567 Salvia bowleyana HOM05D000787 ORTHO05D003730 8.3e-07 56.6 51 56.9
CiPaw.15G031600 Carya illinoinensis HOM05D000787 ORTHO05D003730 1.1e-06 56.2 51 60.8
Cc10_g12710 Coffea canephora HOM05D000787 ORTHO05D003730 1.1e-06 56.2 51 56.9
SalBow1G4249 Salvia bowleyana HOM05D000787 ORTHO05D003730 1.1e-06 56.2 51 56.9
Sed0015195 Sechium edule HOM05D000787 ORTHO05D003730 1.1e-06 56.2 51 56.9
SGA_v2.0_scaffold81G26144 Striga asiatica HOM05D000787 ORTHO05D003730 1.1e-06 56.2 51 56.9
Zm00001eb418130 Zea mays HOM05D000787 ORTHO05D003730 1.1e-06 56.2 51 58.8
Migut.N03262 Erythranthe guttata HOM05D000787 ORTHO05D003730 1.4e-06 55.8 51 54.9
Hma1.2p1_0420F.1_g149650 Hydrangea macrophylla HOM05D000787 ORTHO05D003730 1.4e-06 55.8 51 56.9
Zm00001eb418140 Zea mays HOM05D000787 ORTHO05D003730 1.9e-06 55.5 51 56.9
Zm00001eb091080 Zea mays HOM05D000787 ORTHO05D001019 2.4e-06 55.1 51 58.8
HanXRQChr05g0149321 Helianthus annuus HOM05D000787 ORTHO05D003730 3.2e-06 54.7 51 58.8
Zm00001eb418090 Zea mays HOM05D000787 ORTHO05D003730 3.2e-06 54.7 51 56.9
Gorai.005G088000 Gossypium raimondii HOM05D000787 ORTHO05D003730 4.1e-06 54.3 51 54.9
Nitab4.5_0003240g0040 Nicotiana tabacum HOM05D000787 ORTHO05D003730 4.1e-06 54.3 42 66.7
Gohir.D02G078600 Gossypium hirsutum HOM05D000787 ORTHO05D003730 7.0e-06 53.5 51 52.9
Migut.C01063 Erythranthe guttata HOM05D000787 ORTHO05D003730 9.2e-06 53.1 56 55.4


User provided reference genes

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