Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p20550 Brassica napus HOM05D001002 ORTHO05D021973 1.4e-44 182.6 92 100.0
C04p59740 Brassica napus HOM05D056453 ORTHO05D021973 7.9e-40 166.8 83 98.8
BolC3t17138H Brassica oleracea HOM05D035561 ORTHO05D021973 5.2e-39 164.1 83 96.4
BolC2t11806H Brassica oleracea HOM05D001002 ORTHO05D021973 6.7e-31 137.1 89 79.8
BcaB01g04620 Brassica carinata HOM05D001002 ORTHO05D000802 1.6e-24 115.9 69 87.0
C03p14000 Brassica napus HOM05D001002 ORTHO05D000802 1.6e-24 115.9 69 87.0
BolC3t13847H Brassica oleracea HOM05D001002 ORTHO05D000802 1.6e-24 115.9 69 87.0
BcaC07g39523 Brassica carinata HOM05D001002 ORTHO05D021973 2.7e-24 115.2 66 87.9
A03p11900 Brassica napus HOM05D001002 ORTHO05D000802 4.7e-24 114.4 69 85.5
BraA03t10502Z Brassica rapa HOM05D001002 ORTHO05D000802 1.8e-23 112.5 69 84.1
AT5G59000 Arabidopsis thaliana HOM05D001002 ORTHO05D000802 2.0e-19 99.0 71 74.6
BcaB08g36297 Brassica carinata HOM05D001002 ORTHO05D000802 2.7e-19 98.6 72 75.0
A10p16260 Brassica napus HOM05D001002 ORTHO05D000802 2.7e-19 98.6 72 75.0
C09p51270 Brassica napus HOM05D001002 ORTHO05D000802 2.7e-19 98.6 72 75.0
BolC9t57986H Brassica oleracea HOM05D001002 ORTHO05D000802 2.7e-19 98.6 72 75.0
Sp6g20700 Schrenkiella parvula HOM05D001002 ORTHO05D000802 3.5e-19 98.2 71 76.1
BraA10t43708Z Brassica rapa HOM05D001002 ORTHO05D000802 5.9e-19 97.4 72 73.6
AL8G35380 Arabidopsis lyrata HOM05D001002 ORTHO05D000802 1.3e-18 96.3 72 72.2
Carub.0008s1964 Capsella rubella HOM05D001002 ORTHO05D000802 1.7e-18 95.9 71 74.6
Thhalv10014600m.g Eutrema salsugineum HOM05D001002 ORTHO05D000802 1.7e-18 95.9 71 73.2
CARHR285230 Cardamine hirsuta HOM05D001002 ORTHO05D000802 2.9e-18 95.1 71 73.2
Aa31LG1G11700 Aethionema arabicum HOM05D001002 ORTHO05D000802 1.6e-16 89.4 72 69.4
THA.LOC104810739 Tarenaya hassleriana HOM05D001002 ORTHO05D000802 7.5e-14 80.5 91 56.0
THA.LOC104814897 Tarenaya hassleriana HOM05D001002 ORTHO05D000802 1.4e-12 76.3 69 59.4
Ciclev10029385m.g Citrus clementina HOM05D001002 ORTHO05D000802 7.8e-11 70.5 71 50.7
A03p60070 Brassica napus HOM05D001002 ORTHO05D000802 3.8e-10 68.2 39 89.7
PGSC0003DMG400020824 Solanum tuberosum HOM05D001002 ORTHO05D000802 5.0e-10 67.8 63 54.0
Sopen06g001820 Solanum pennellii HOM05D001002 ORTHO05D000802 8.6e-10 67.0 63 54.0
CiPaw.13G084100 Carya illinoinensis HOM05D001002 ORTHO05D000802 1.5e-09 66.2 72 50.0
Dinv43080 Davidia involucrata HOM05D001002 ORTHO05D000802 1.5e-09 66.2 69 50.7
Cfa011626 Carpinus fangiana HOM05D005372 ORTHO05D006593 1.9e-09 65.9 71 50.7
Nitab4.5_0000880g0060 Nicotiana tabacum HOM05D001002 ORTHO05D000802 1.9e-09 65.9 61 55.7
MD04G1142100 Malus domestica HOM05D001002 ORTHO05D000802 2.5e-09 65.5 84 46.4
Solyc06g005850.3 Solanum lycopersicum HOM05D001002 ORTHO05D000802 2.5e-09 65.5 63 52.4
Haze_24229 Corylus avellana HOM05D001002 ORTHO05D000802 3.3e-09 65.1 71 50.7
Lsat_1_v5_gn_5_168160 Lactuca sativa HOM05D001002 ORTHO05D000802 3.3e-09 65.1 75 48.0
HanXRQChr11g0337981 Helianthus annuus HOM05D001002 ORTHO05D000802 5.6e-09 64.3 73 46.6
QL01p028916 Quercus lobata HOM05D001002 ORTHO05D000802 5.6e-09 64.3 80 47.5
CSS0035589 Camellia sinensis var. sinensis HOM05D001002 ORTHO05D000802 7.3e-09 63.9 71 53.5
MD12G1156700 Malus domestica HOM05D001002 ORTHO05D000802 7.3e-09 63.9 84 46.4
Nitab4.5_0000744g0080 Nicotiana tabacum HOM05D001002 ORTHO05D000802 7.3e-09 63.9 71 52.1
CSS0030760 Camellia sinensis var. sinensis HOM05D001002 ORTHO05D000802 1.2e-08 63.2 71 50.7
Nitab4.5_0002405g0100 Nicotiana tabacum HOM05D001002 ORTHO05D000802 1.2e-08 63.2 61 52.5
Solyc06g076610.3 Solanum lycopersicum HOM05D001002 ORTHO05D000802 1.2e-08 63.2 71 49.3
vmacro14573 Vaccinium macrocarpon HOM05D001002 ORTHO05D000802 1.2e-08 63.2 71 47.9
Cpa.g.sc56.78 Carica papaya HOM05D001002 ORTHO05D000802 1.6e-08 62.8 86 46.5
Ciclev10012571m.g Citrus clementina HOM05D001002 ORTHO05D000802 1.6e-08 62.8 84 45.2
Manes.01G166400 Manihot esculenta HOM05D001002 ORTHO05D000802 1.6e-08 62.8 80 47.5
Potri.009G039700 Populus trichocarpa HOM05D001002 ORTHO05D000802 1.6e-08 62.8 80 48.8
Manes.08G083100 Manihot esculenta HOM05D001002 ORTHO05D000802 2.1e-08 62.4 84 44.0
Nitab4.5_0000933g0120 Nicotiana tabacum HOM05D001002 ORTHO05D000802 2.1e-08 62.4 71 50.7
Cc01_g13620 Coffea canephora HOM05D001002 ORTHO05D000802 2.8e-08 62.0 71 49.3
Haze_23163 Corylus avellana HOM05D001002 ORTHO05D000802 2.8e-08 62.0 73 47.9
Sopen06g033000 Solanum pennellii HOM05D001002 ORTHO05D000802 2.8e-08 62.0 71 47.9
TWI75G1404 Tripterygium wilfordii HOM05D001002 ORTHO05D000802 2.8e-08 62.0 80 48.8
Atru.chr8.2115 Acer truncatum HOM05D001002 ORTHO05D000802 3.6e-08 61.6 84 44.0
Dinv34319 Davidia involucrata HOM05D001002 ORTHO05D000802 3.6e-08 61.6 70 51.4
Lsat_1_v5_gn_0_45521 Lactuca sativa HOM05D001002 ORTHO05D000802 3.6e-08 61.6 83 44.6
Lsat_1_v5_gn_8_14321 Lactuca sativa HOM05D001002 ORTHO05D000802 3.6e-08 61.6 83 44.6
Sabra16G0149800 Salix brachista HOM05D001002 ORTHO05D000802 3.6e-08 61.6 80 47.5
Haze_09298 Corylus avellana HOM05D000200 ORTHO05D017191 4.7e-08 61.2 67 47.8
Peaxi162Scf01058g00153 Petunia axillaris HOM05D001002 ORTHO05D000802 4.7e-08 61.2 77 48.1
Prupe.6G065100 Prunus persica HOM05D001002 ORTHO05D000802 6.1e-08 60.8 71 47.9
PGSC0003DMG400030428 Solanum tuberosum HOM05D001002 ORTHO05D000802 6.1e-08 60.8 71 47.9
TWI53G1970 Tripterygium wilfordii HOM05D001002 ORTHO05D000802 6.1e-08 60.8 90 45.6
CANSAT54G1577 Cannabis sativa HOM05D001002 ORTHO05D000802 8.0e-08 60.5 76 47.4
CAN.G741.14 Capsicum annuum HOM05D001002 ORTHO05D000802 8.0e-08 60.5 69 49.3
MELO3C020584.2 Cucumis melo HOM05D001002 ORTHO05D000802 1.0e-07 60.1 73 50.7
CsaV3_1G035870 Cucumis sativus L. HOM05D001002 ORTHO05D000802 1.0e-07 60.1 73 50.7
Peaxi162Scf00025g01319 Petunia axillaris HOM05D001002 ORTHO05D000802 1.0e-07 60.1 63 47.6
Duzib128G1548 Durio zibethinus HOM05D001002 ORTHO05D000802 1.4e-07 59.7 84 40.5
Gohir.A09G162300 Gossypium hirsutum HOM05D001002 ORTHO05D000802 1.4e-07 59.7 84 40.5
PSO384G2505 Papaver somniferum HOM05D001002 ORTHO05D000802 1.4e-07 59.7 84 44.0
RcHm_v2.0_Chr5g0067331 Rosa chinensis HOM05D001002 ORTHO05D000802 1.4e-07 59.7 73 45.2
GSVIVG01024828001 Vitis vinifera HOM05D001002 ORTHO05D000802 1.4e-07 59.7 71 49.3
FvH4_3g37440 Fragaria vesca HOM05D001002 ORTHO05D000802 1.8e-07 59.3 72 45.8
FAN21G2753 Fragaria x ananassa HOM05D001002 ORTHO05D000802 1.8e-07 59.3 72 45.8
Hma1.2p1_0543F.1_g175303 Hydrangea macrophylla HOM05D001002 ORTHO05D000802 1.8e-07 59.3 65 47.7
Hma1.2p1_0543F.1_g175330 Hydrangea macrophylla HOM05D001002 ORTHO05D000802 1.8e-07 59.3 65 47.7
Manes.02G123900 Manihot esculenta HOM05D001002 ORTHO05D000802 1.8e-07 59.3 80 45.0
PSO339G6060 Papaver somniferum HOM05D001002 ORTHO05D000802 1.8e-07 59.3 84 44.0
Potri.001G246700 Populus trichocarpa HOM05D001002 ORTHO05D000802 1.8e-07 59.3 80 47.5
CAN.G483.10 Capsicum annuum HOM05D001002 ORTHO05D000802 2.3e-07 58.9 63 47.6
ClCG03G001070 Citrullus lanatus HOM05D001002 ORTHO05D000802 2.3e-07 58.9 73 49.3
Cc01_g18970 Coffea canephora HOM05D001002 ORTHO05D000802 2.3e-07 58.9 64 50.0
FAN16G2867 Fragaria x ananassa HOM05D004551 ORTHO05D005262 2.3e-07 58.9 72 45.8
MD03G1080600 Malus domestica HOM05D001002 ORTHO05D000802 2.3e-07 58.9 71 46.5
Actinidia08555 Actinidia chinensis HOM05D001002 ORTHO05D000802 3.0e-07 58.5 75 46.7
CiPaw.14G062900 Carya illinoinensis HOM05D001002 ORTHO05D000802 3.0e-07 58.5 79 43.0
Eucgr.K03011 Eucalyptus grandis HOM05D001002 ORTHO05D000802 3.0e-07 58.5 84 44.0
HPP92_026965 Vanilla planifolia HOM05D001002 ORTHO05D000802 3.0e-07 58.5 73 50.7
Cfa001384 Carpinus fangiana HOM05D001002 ORTHO05D000802 4.0e-07 58.2 84 45.2
CiPaw.01G294100 Carya illinoinensis HOM05D001002 ORTHO05D000802 5.2e-07 57.8 84 45.2
CDE09G0322 Ceratophyllum demersum HOM05D001002 ORTHO05D000802 5.2e-07 57.8 89 42.7
ClCG11G006440 Citrullus lanatus HOM05D001002 ORTHO05D000802 5.2e-07 57.8 87 39.1
PGR031G3426 Punica granatum HOM05D001002 ORTHO05D000802 5.2e-07 57.8 84 44.0
VMungo0647G1487 Vigna mungo HOM05D001002 ORTHO05D000802 5.2e-07 57.8 85 45.9
FAN09G3991 Fragaria x ananassa HOM05D001002 ORTHO05D000802 6.8e-07 57.4 85 40.0
MBI14_g28027_MAGBIO Magnolia biondii HOM05D001002 ORTHO05D000802 6.8e-07 57.4 77 42.9
Oeu012997.1 Olea europaea HOM05D001002 ORTHO05D000802 6.8e-07 57.4 84 42.9
SalBow5G3926 Salvia bowleyana HOM05D001002 ORTHO05D000802 6.8e-07 57.4 84 40.5
TWI31G1219 Tripterygium wilfordii HOM05D001002 ORTHO05D000802 6.8e-07 57.4 90 44.4
Aqoxy1G00772 Aquilegia oxysepala HOM05D001002 ORTHO05D000802 8.9e-07 57.0 78 43.6
arahy.Tifrunner.gnm1.ann1.L09AQ3 Arachis hypogaea HOM05D001002 ORTHO05D000802 8.9e-07 57.0 84 42.9
ClCG10G021660 Citrullus lanatus HOM05D001002 ORTHO05D000802 8.9e-07 57.0 84 39.3
Cc00_g35020 Coffea canephora HOM05D001002 ORTHO05D000802 8.9e-07 57.0 66 48.5
COL.COLO4_14657 Corchorus olitorius HOM05D001002 ORTHO05D000802 8.9e-07 57.0 84 39.3
Lj1A948G46 Lonicera japonica HOM05D001002 ORTHO05D000802 8.9e-07 57.0 85 43.5
arahy.Tifrunner.gnm1.ann1.A4IJUG Arachis hypogaea HOM05D001002 ORTHO05D000802 1.2e-06 56.6 79 43.0
arahy.Tifrunner.gnm1.ann1.VU3YHT Arachis hypogaea HOM05D001002 ORTHO05D000802 1.2e-06 56.6 79 43.0
MELO3C009206.2 Cucumis melo HOM05D001002 ORTHO05D000802 1.2e-06 56.6 84 39.3
Lsat_1_v5_gn_2_120201 Lactuca sativa HOM05D001002 ORTHO05D000802 1.2e-06 56.6 86 43.0
HPP92_015344 Vanilla planifolia HOM05D001002 ORTHO05D000802 1.2e-06 56.6 66 51.5
CANSAT35G1891 Cannabis sativa HOM05D001002 ORTHO05D000802 1.5e-06 56.2 81 42.0
FvH4_6g12450 Fragaria vesca HOM05D001002 ORTHO05D000802 1.5e-06 56.2 85 38.8
FAN14G0032 Fragaria x ananassa HOM05D001002 ORTHO05D000802 1.5e-06 56.2 85 38.8
Glyma.14G063500 Glycine max HOM05D001002 ORTHO05D000802 1.5e-06 56.2 86 43.0
RcHm_v2.0_Chr3g0464261 Rosa chinensis HOM05D001002 ORTHO05D000802 1.5e-06 56.2 85 38.8
Sp6g37070 Schrenkiella parvula HOM05D001002 ORTHO05D000802 1.5e-06 56.2 85 40.0
arahy.Tifrunner.gnm1.ann1.J8RH1F Arachis hypogaea HOM05D001002 ORTHO05D000802 2.0e-06 55.8 84 42.9
CsaV3_3G034350 Cucumis sativus L. HOM05D001002 ORTHO05D000802 2.0e-06 55.8 84 39.3
CsaV3_6G001560 Cucumis sativus L. HOM05D001002 ORTHO05D000802 2.0e-06 55.8 87 41.4
ECA238G3136 Erigeron canadensis HOM05D001002 ORTHO05D000802 2.0e-06 55.8 86 41.9
Thecc.05G026000 Theobroma cacao HOM05D001002 ORTHO05D000802 2.0e-06 55.8 84 38.1
Atru.chr12.281 Acer truncatum HOM05D001002 ORTHO05D000802 2.6e-06 55.5 84 44.0
MSTRG.8980 Avicennia marina HOM05D001002 ORTHO05D000802 2.6e-06 55.5 84 44.0
Duzib093G0453 Durio zibethinus HOM05D001002 ORTHO05D000802 2.6e-06 55.5 84 39.3
Duzib106G0311 Durio zibethinus HOM05D001002 ORTHO05D000802 2.6e-06 55.5 84 38.1
Gohir.D04G126300 Gossypium hirsutum HOM05D001002 ORTHO05D000802 2.6e-06 55.5 82 41.5
Gorai.012G109400 Gossypium raimondii HOM05D001002 ORTHO05D000802 2.6e-06 55.5 82 41.5
Manes.09G099800 Manihot esculenta HOM05D001002 ORTHO05D000802 2.6e-06 55.5 77 40.3
Nitab4.5_0005708g0010 Nicotiana tabacum HOM05D001002 ORTHO05D000802 2.6e-06 55.5 84 41.7
CiPaw.02G188800 Carya illinoinensis HOM05D001002 ORTHO05D000802 3.4e-06 55.1 72 43.1
Haze_20913 Corylus avellana HOM05D001002 ORTHO05D000802 3.4e-06 55.1 84 41.7
Potri.008G062600 Populus trichocarpa HOM05D001002 ORTHO05D000802 3.4e-06 55.1 84 44.0
Prupe.2G244000 Prunus persica HOM05D001002 ORTHO05D000802 3.4e-06 55.1 84 42.9
Cc02_g07100 Coffea canephora HOM05D001002 ORTHO05D000802 4.4e-06 54.7 84 44.0
Nitab4.5_0000278g0080 Nicotiana tabacum HOM05D001002 ORTHO05D000802 4.4e-06 54.7 85 42.4
Phvul.008G227700 Phaseolus vulgaris HOM05D001002 ORTHO05D000802 4.4e-06 54.7 84 42.9
CSS0036258 Camellia sinensis var. sinensis HOM05D001002 ORTHO05D000802 5.7e-06 54.3 83 39.8
DCAR_011770 Daucus carota HOM05D001002 ORTHO05D000802 5.7e-06 54.3 84 44.0
FAN05G0112 Fragaria x ananassa HOM05D001002 ORTHO05D000802 5.7e-06 54.3 85 37.6
HanXRQChr01g0010981 Helianthus annuus HOM05D001002 ORTHO05D000802 5.7e-06 54.3 75 42.7
HanXRQChr07g0201871 Helianthus annuus HOM05D001002 ORTHO05D000802 5.7e-06 54.3 87 44.8
Atru.chr3.4043 Acer truncatum HOM05D001002 ORTHO05D000802 7.5e-06 53.9 66 42.4
CAN.G394.94 Capsicum annuum HOM05D001002 ORTHO05D000802 7.5e-06 53.9 71 46.5
Dinv20926 Davidia involucrata HOM05D001002 ORTHO05D000802 7.5e-06 53.9 84 42.9
Dinv21018 Davidia involucrata HOM05D001002 ORTHO05D000802 7.5e-06 53.9 84 42.9
Nn2g13558 Nelumbo nucifera HOM05D001002 ORTHO05D000802 7.5e-06 53.9 85 42.4
Phvul.008G112400 Phaseolus vulgaris HOM05D001002 ORTHO05D000802 7.5e-06 53.9 84 41.7
QL02p028642 Quercus lobata HOM05D001002 ORTHO05D000802 7.5e-06 53.9 83 43.4
QL08p062417 Quercus lobata HOM05D001002 ORTHO05D000802 7.5e-06 53.9 83 43.4
Sabra08G0046200 Salix brachista HOM05D001002 ORTHO05D000802 7.5e-06 53.9 81 39.5
Sed0019816 Sechium edule HOM05D001002 ORTHO05D000802 7.5e-06 53.9 87 37.9
TAR623G0487 Trochodendron aralioides HOM05D001002 ORTHO05D000802 7.5e-06 53.9 76 42.1
Medtr5g081560 Medicago truncatula HOM05D001002 ORTHO05D000802 9.8e-06 53.5 84 42.9
Potri.010G195100 Populus trichocarpa HOM05D001002 ORTHO05D000802 9.8e-06 53.5 85 43.5
Sed0027107 Sechium edule HOM05D001002 ORTHO05D000802 9.8e-06 53.5 73 45.2
TPR.G8052 Trifolium pratense HOM05D001002 ORTHO05D000802 9.8e-06 53.5 84 42.9


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