Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p48030 Brassica napus HOM05D002909 ORTHO05D000493 1.7e-75 285.8 136 100.0
BraA05t21980Z Brassica rapa HOM05D002909 ORTHO05D000493 3.1e-48 195.3 144 69.4
AL4G21500 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 4.8e-41 171.4 142 59.9
AL4G15410 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.1e-40 170.2 140 60.0
BolC5t33508H Brassica oleracea HOM05D002909 ORTHO05D000493 9.0e-40 167.2 151 60.9
C05p47960 Brassica napus HOM05D002909 ORTHO05D000493 4.5e-39 164.9 139 66.2
BraA05t21996Z Brassica rapa HOM05D002909 ORTHO05D000493 5.8e-39 164.5 151 60.3
BcaC05g28665 Brassica carinata HOM05D002909 ORTHO05D000493 9.9e-39 163.7 138 65.2
BolC5t33510H Brassica oleracea HOM05D002909 ORTHO05D000493 9.9e-39 163.7 138 65.2
A05p31650 Brassica napus HOM05D002909 ORTHO05D000493 1.9e-37 159.5 138 63.8
BraA05t21998Z Brassica rapa HOM05D002909 ORTHO05D000493 1.9e-37 159.5 138 63.8
A05p30770 Brassica napus HOM05D002909 ORTHO05D000493 1.3e-35 153.3 139 63.3
BcaB06g25936 Brassica carinata HOM05D002909 ORTHO05D000493 3.3e-34 148.7 137 60.6
A05p31620 Brassica napus HOM05D002909 ORTHO05D000493 6.2e-33 144.4 138 60.9
BraA05t21918Z Brassica rapa HOM05D002909 ORTHO05D000493 6.2e-33 144.4 136 60.3
BcaC02g12137 Brassica carinata HOM05D002909 ORTHO05D000493 1.4e-32 143.3 138 57.2
BolC4t22344H Brassica oleracea HOM05D002909 ORTHO05D000493 1.4e-32 143.3 138 57.2
BraA05t21995Z Brassica rapa HOM05D002909 ORTHO05D000493 2.4e-32 142.5 138 60.1
BcaC05g28663 Brassica carinata HOM05D002909 ORTHO05D000493 4.0e-32 141.7 138 60.1
BolC5t33506H Brassica oleracea HOM05D002909 ORTHO05D000493 4.0e-32 141.7 138 60.1
BcaB02g09041 Brassica carinata HOM05D004762 ORTHO05D005972 3.4e-31 138.7 138 54.3
BcaC02g12135 Brassica carinata HOM05D002909 ORTHO05D000493 3.4e-31 138.7 138 54.3
Carub.0001s3549 Capsella rubella HOM05D002909 ORTHO05D000493 8.4e-30 134.0 138 55.1
A05p31430 Brassica napus HOM05D002909 ORTHO05D000493 1.4e-29 133.3 140 55.0
Carub.0001s3547 Capsella rubella HOM05D002909 ORTHO05D000493 1.9e-29 132.9 138 52.9
BcaC05g28642 Brassica carinata HOM05D002909 ORTHO05D000493 5.5e-29 131.3 140 53.6
A05p31640 Brassica napus HOM05D002909 ORTHO05D000493 5.5e-29 131.3 151 51.7
C05p47700 Brassica napus HOM05D002909 ORTHO05D000493 5.5e-29 131.3 140 54.3
C05p47750 Brassica napus HOM05D002909 ORTHO05D000493 9.3e-29 130.6 140 53.6
A05p31390 Brassica napus HOM05D002909 ORTHO05D000493 1.2e-28 130.2 140 54.3
BraA05t21978Z Brassica rapa HOM05D002909 ORTHO05D000493 1.2e-28 130.2 140 54.3
C05p48010 Brassica napus HOM05D002909 ORTHO05D000493 3.5e-28 128.6 118 60.2
Thhalv10021970m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 3.0e-27 125.6 137 50.4
Thhalv10025165m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 3.9e-27 125.2 143 46.9
Thhalv10027555m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 5.1e-27 124.8 138 53.6
AL4G38580 Arabidopsis lyrata HOM05D000001 ORTHO05D000003 6.7e-27 124.4 138 51.4
CARHR117790 Cardamine hirsuta HOM05D002909 ORTHO05D000493 8.7e-27 124.0 144 50.7
Thhalv10014018m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.1e-26 123.6 138 50.0
BcaB02g09042 Brassica carinata HOM05D002909 ORTHO05D000493 1.9e-26 122.9 106 62.3
Carub.0004s0321 Capsella rubella HOM05D002909 ORTHO05D000493 1.9e-26 122.9 138 52.2
Carub.0001s3548 Capsella rubella HOM05D002909 ORTHO05D000493 3.3e-26 122.1 138 49.3
AL3G41860 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 4.3e-26 121.7 145 50.3
BcaC05g28567 Brassica carinata HOM05D002909 ORTHO05D000493 4.3e-26 121.7 196 43.9
Carub.0001s3546 Capsella rubella HOM05D002909 ORTHO05D000493 4.3e-26 121.7 136 50.0
CARHR135220 Cardamine hirsuta HOM05D002909 ORTHO05D000493 5.7e-26 121.3 140 51.4
Carub.0006s0171 Capsella rubella HOM05D002909 ORTHO05D000493 7.4e-26 120.9 138 49.3
AL1G67360 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 9.7e-26 120.6 138 52.9
AT5G02910 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 1.3e-25 120.2 138 49.3
BcaNung00595 Brassica carinata HOM05D002909 ORTHO05D000493 1.6e-25 119.8 138 50.7
C01p03500 Brassica napus HOM05D002909 ORTHO05D000493 1.6e-25 119.8 138 50.7
BolC1t00339H Brassica oleracea HOM05D002909 ORTHO05D000493 1.6e-25 119.8 138 50.7
Sp6g39690 Schrenkiella parvula HOM05D002909 ORTHO05D000493 2.2e-25 119.4 138 48.6
AL1G15160 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 2.8e-25 119.0 139 50.4
AL6G12220 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 3.7e-25 118.6 138 47.8
BcaNung03627 Brassica carinata HOM05D002909 ORTHO05D000493 4.8e-25 118.2 138 48.6
BolC5t33489H Brassica oleracea HOM05D002909 ORTHO05D000493 6.3e-25 117.9 131 52.7
AT5G02920 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 8.2e-25 117.5 145 49.0
A01p03150 Brassica napus HOM05D002909 ORTHO05D000493 8.2e-25 117.5 138 50.0
AL6G12190 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.4e-24 116.7 138 48.6
AT3G03360 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 2.4e-24 115.9 141 48.2
BcaC05g28664 Brassica carinata HOM05D002909 ORTHO05D000493 3.1e-24 115.5 75 76.0
CARHR210400 Cardamine hirsuta HOM05D002909 ORTHO05D000493 3.1e-24 115.5 138 46.4
Aa31LG1G22020 Aethionema arabicum HOM05D002909 ORTHO05D000493 5.3e-24 114.8 135 51.9
BraA01t00300Z Brassica rapa HOM05D002909 ORTHO05D000493 9.0e-24 114.0 135 50.4
AL6G44930 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.2e-23 113.6 133 50.4
AL6G12210 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.5e-23 113.2 154 44.2
C05p47950 Brassica napus HOM05D002909 ORTHO05D000493 1.5e-23 113.2 101 64.4
Carub.0002s0506 Capsella rubella HOM05D002909 ORTHO05D000493 2.6e-23 112.5 133 48.9
BcaC05g28662 Brassica carinata HOM05D002909 ORTHO05D000493 3.4e-23 112.1 138 52.9
BolC5t33509H Brassica oleracea HOM05D002909 ORTHO05D000493 3.4e-23 112.1 73 76.7
BcaNung03626 Brassica carinata HOM05D002909 ORTHO05D000493 2.2e-22 109.4 132 51.5
CARHR210370 Cardamine hirsuta HOM05D002909 ORTHO05D000493 2.2e-22 109.4 138 50.0
BcaC05g28646 Brassica carinata HOM05D002909 ORTHO05D000493 3.8e-22 108.6 109 54.1
BolC5t33395H Brassica oleracea HOM05D002909 ORTHO05D000493 8.5e-22 107.5 99 64.6
BcaC06g32021 Brassica carinata HOM05D002909 ORTHO05D000493 1.1e-21 107.1 138 44.2
CARHR210420 Cardamine hirsuta HOM05D002909 ORTHO05D000493 1.1e-21 107.1 138 45.7
Thhalv10015785m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.1e-21 107.1 130 48.5
BcaNung04729 Brassica carinata HOM05D002909 ORTHO05D000493 1.4e-21 106.7 138 44.2
A10p32850 Brassica napus HOM05D002909 ORTHO05D000493 1.4e-21 106.7 138 43.5
C04p41470 Brassica napus HOM05D002909 ORTHO05D000493 1.9e-21 106.3 134 45.5
BolC4t25729H Brassica oleracea HOM05D002909 ORTHO05D000493 1.9e-21 106.3 134 45.5
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 2.5e-21 105.9 131 49.6
BraA10t45322Z Brassica rapa HOM05D002909 ORTHO05D000493 3.2e-21 105.5 138 42.8
A04p07840 Brassica napus HOM05D002909 ORTHO05D000493 4.2e-21 105.1 134 44.8
BraA04t16472Z Brassica rapa HOM05D002909 ORTHO05D000493 4.2e-21 105.1 134 44.8
Carub.0006s0173 Capsella rubella HOM05D002909 ORTHO05D000493 7.2e-21 104.4 135 46.7
Thhalv10013441m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 7.2e-21 104.4 145 42.8
CARHR210380 Cardamine hirsuta HOM05D002909 ORTHO05D000493 1.2e-20 103.6 144 44.4
AT5G02930 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 1.6e-20 103.2 147 44.9
BcaC02g09337 Brassica carinata HOM05D002909 ORTHO05D000493 1.6e-20 103.2 134 44.8
C09p73750 Brassica napus HOM05D002909 ORTHO05D000493 1.6e-20 103.2 138 42.0
BolC9t60108H Brassica oleracea HOM05D002909 ORTHO05D000493 1.6e-20 103.2 138 42.0
Thhalv10027265m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.6e-20 103.2 137 44.5
Carub.0006s0172 Capsella rubella HOM05D002909 ORTHO05D000493 3.6e-20 102.1 131 47.3
Thhalv10022165m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 6.1e-20 101.3 135 46.7
C09p31760 Brassica napus HOM05D002909 ORTHO05D000493 1.0e-19 100.5 116 48.3
C09p31710 Brassica napus HOM05D002909 ORTHO05D000493 1.4e-19 100.1 116 48.3
A07p29890 Brassica napus HOM05D002909 ORTHO05D000493 8.8e-19 97.4 148 41.2
BolC5t33490H Brassica oleracea HOM05D002909 ORTHO05D000493 5.7e-18 94.7 141 45.4
AT5G03100 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 7.4e-18 94.4 135 44.4
Carub.0002s0507 Capsella rubella HOM05D002909 ORTHO05D000493 9.7e-18 94.0 136 47.8
A03p00910 Brassica napus HOM05D002909 ORTHO05D000493 1.3e-17 93.6 137 46.7
BraA03t09473Z Brassica rapa HOM05D002909 ORTHO05D000493 1.3e-17 93.6 137 46.7
BcaB01g05876 Brassica carinata HOM05D002909 ORTHO05D000493 2.2e-17 92.8 141 45.4
BolC3t12677H Brassica oleracea HOM05D002909 ORTHO05D000493 2.2e-17 92.8 141 45.4
Sp2g05870 Schrenkiella parvula HOM05D002909 ORTHO05D000493 2.2e-17 92.8 133 45.1
SpUn0028_0070 Schrenkiella parvula HOM05D002909 ORTHO05D000493 2.2e-17 92.8 133 45.1
BcaB03g15699 Brassica carinata HOM05D002909 ORTHO05D000493 3.7e-17 92.0 142 40.8
C03p01170 Brassica napus HOM05D002909 ORTHO05D000493 1.1e-16 90.5 120 46.7
A09p18750 Brassica napus HOM05D002909 ORTHO05D000493 1.8e-16 89.7 132 44.7
BraA03t09745Z Brassica rapa HOM05D002909 ORTHO05D000493 1.8e-16 89.7 138 42.8
AL3G31320 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 2.4e-16 89.4 66 66.7
AL4G36770 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 3.1e-16 89.0 134 41.8
CARHR093470 Cardamine hirsuta HOM05D002909 ORTHO05D000493 3.1e-16 89.0 68 64.7
BcaB01g05865 Brassica carinata HOM05D002909 ORTHO05D000493 5.3e-16 88.2 138 40.6
BcaB05g21858 Brassica carinata HOM05D002909 ORTHO05D000493 5.3e-16 88.2 138 40.6
BraA05t21982Z Brassica rapa HOM05D002909 ORTHO05D000493 6.9e-16 87.8 67 67.2
AL6G12380 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 1.5e-15 86.7 134 41.0
BcaC01g05421 Brassica carinata HOM05D002909 ORTHO05D000493 2.6e-15 85.9 142 43.0
A03p04020 Brassica napus HOM05D002909 ORTHO05D000493 2.6e-15 85.9 138 42.0
BolC5t33505H Brassica oleracea HOM05D002909 ORTHO05D000493 3.4e-15 85.5 138 44.2
BcaNung03314 Brassica carinata HOM05D002909 ORTHO05D000493 5.9e-15 84.7 132 43.2
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 1.0e-14 84.0 133 44.4
C09p23440 Brassica napus HOM05D002909 ORTHO05D000493 1.0e-14 84.0 133 44.4
BolC9t55266H Brassica oleracea HOM05D002909 ORTHO05D000493 1.0e-14 84.0 133 44.4
BcaB07g31152 Brassica carinata HOM05D002909 ORTHO05D000493 2.9e-14 82.4 132 41.7
AT3G28410 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 5.0e-14 81.6 134 38.8
Carub.0006s0158 Capsella rubella HOM05D002909 ORTHO05D000493 6.5e-14 81.3 134 38.8
AT5G02700 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 1.1e-13 80.5 134 38.1
BolC5t33479H Brassica oleracea HOM05D002909 ORTHO05D000493 1.9e-13 79.7 129 39.5
AL6G12200 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 3.2e-13 79.0 122 44.3
A07p18610 Brassica napus HOM05D002909 ORTHO05D000493 4.2e-13 78.6 136 39.0
C09p73670 Brassica napus HOM05D002909 ORTHO05D000493 5.5e-13 78.2 134 41.8
BolC9t60097H Brassica oleracea HOM05D002909 ORTHO05D000493 5.5e-13 78.2 134 41.8
BcaC06g32019 Brassica carinata HOM05D002909 ORTHO05D000493 7.2e-13 77.8 132 41.7
A03p00970 Brassica napus HOM05D002909 ORTHO05D000493 9.4e-13 77.4 137 42.3
BraA03t09479Z Brassica rapa HOM05D002909 ORTHO05D000493 9.4e-13 77.4 137 42.3
BcaC06g32033 Brassica carinata HOM05D002909 ORTHO05D000493 1.2e-12 77.0 143 39.2
A05p30760 Brassica napus HOM05D002909 ORTHO05D000493 1.6e-12 76.6 130 46.9
C03p01260 Brassica napus HOM05D002909 ORTHO05D000493 1.6e-12 76.6 118 39.8
BolC3t12685H Brassica oleracea HOM05D002909 ORTHO05D000493 1.6e-12 76.6 118 39.8
AT1G49610 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 2.7e-12 75.9 105 42.9
Thhalv10026908m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 2.7e-12 75.9 136 38.2
BraA07t29573Z Brassica rapa HOM05D002909 ORTHO05D000493 3.6e-12 75.5 136 37.5
AL6G12050 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 6.1e-12 74.7 134 38.1
A09p18730 Brassica napus HOM05D002909 ORTHO05D000493 6.1e-12 74.7 114 43.0
C09p73760 Brassica napus HOM05D002909 ORTHO05D000493 1.4e-11 73.6 134 40.3
BolC9t60109H Brassica oleracea HOM05D002909 ORTHO05D000493 1.4e-11 73.6 134 40.3
C04p07200 Brassica napus HOM05D002909 ORTHO05D000493 2.3e-11 72.8 102 48.0
AL1G67340 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 5.1e-11 71.6 129 36.4
CARHR210560 Cardamine hirsuta HOM05D002909 ORTHO05D000493 5.1e-11 71.6 131 38.9
BcaC06g32031 Brassica carinata HOM05D002909 ORTHO05D000493 6.7e-11 71.2 123 37.4
A03p22610 Brassica napus HOM05D000223 ORTHO05D001193 6.7e-11 71.2 103 43.7
C05p47740 Brassica napus HOM05D002909 ORTHO05D000493 6.7e-11 71.2 104 44.2
BolC3t15065H Brassica oleracea HOM05D000223 ORTHO05D001193 6.7e-11 71.2 103 43.7
BraA03t11487Z Brassica rapa HOM05D000223 ORTHO05D001193 6.7e-11 71.2 103 43.7
BcaC06g32020 Brassica carinata HOM05D002909 ORTHO05D000493 1.1e-10 70.5 135 40.0
A05p31410 Brassica napus HOM05D002909 ORTHO05D000493 1.5e-10 70.1 104 43.3
Thhalv10014041m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 2.0e-10 69.7 128 41.4
BolC9t56033H Brassica oleracea HOM05D002909 ORTHO05D000493 2.6e-10 69.3 114 41.2
BcaNung04728 Brassica carinata HOM05D002909 ORTHO05D000493 3.3e-10 68.9 126 41.3
C03p26800 Brassica napus HOM05D000223 ORTHO05D001193 3.3e-10 68.9 103 42.7
BolC9t56026H Brassica oleracea HOM05D002909 ORTHO05D000493 3.3e-10 68.9 113 41.6
C09p73770 Brassica napus HOM05D002909 ORTHO05D000493 7.4e-10 67.8 126 41.3
BolC9t60110H Brassica oleracea HOM05D002909 ORTHO05D000493 7.4e-10 67.8 126 41.3
CARHR210540 Cardamine hirsuta HOM05D002909 ORTHO05D000493 9.7e-10 67.4 85 49.4
BolC4t23847H Brassica oleracea HOM05D002909 ORTHO05D000493 2.2e-09 66.2 81 46.9
BcaC05g28644 Brassica carinata HOM05D002909 ORTHO05D000493 3.7e-09 65.5 56 57.1
THA.LOC104809676 Tarenaya hassleriana HOM05D001396 ORTHO05D000493 4.8e-09 65.1 140 35.7
CARHR210590 Cardamine hirsuta HOM05D002909 ORTHO05D000493 1.1e-08 63.9 67 56.7
BcaB01g03557 Brassica carinata HOM05D002909 ORTHO05D000493 2.4e-08 62.8 67 53.7
AT1G57690 Arabidopsis thaliana HOM05D002909 ORTHO05D000493 4.1e-08 62.0 138 37.7
A05p31610 Brassica napus HOM05D002909 ORTHO05D000493 5.3e-08 61.6 128 39.8
BcaB01g05867 Brassica carinata HOM05D002909 ORTHO05D000493 7.0e-08 61.2 110 40.9
Thhalv10029491m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 1.5e-07 60.1 131 38.9
Dinv40489 Davidia involucrata HOM05D001396 ORTHO05D000493 2.0e-07 59.7 110 38.2
BcaC04g22094 Brassica carinata HOM05D002909 ORTHO05D000493 2.6e-07 59.3 131 33.6
BcaNung03274 Brassica carinata HOM05D002909 ORTHO05D000493 3.4e-07 58.9 91 40.7
Thhalv10029332m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 3.4e-07 58.9 131 38.9
Carub.0002s0692 Capsella rubella HOM05D002909 ORTHO05D000493 4.5e-07 58.5 74 45.9
Thhalv10022252m.g Eutrema salsugineum HOM05D002909 ORTHO05D000493 4.5e-07 58.5 66 48.5
BcaC09g49523 Brassica carinata HOM05D002909 ORTHO05D000493 7.7e-07 57.8 74 44.6
C05p47930 Brassica napus HOM05D002909 ORTHO05D000493 1.0e-06 57.4 55 60.0
BcaC02g10939 Brassica carinata HOM05D002909 ORTHO05D000493 1.3e-06 57.0 140 30.0
Peaxi162Scf00650g00355 Petunia axillaris HOM05D001396 ORTHO05D000493 1.3e-06 57.0 130 34.6
Peaxi162Scf01070g00030 Petunia axillaris HOM05D001396 ORTHO05D000493 5.0e-06 55.1 134 31.3
AL380U10020 Arabidopsis lyrata HOM05D002909 ORTHO05D000493 6.5e-06 54.7 97 39.2
Peaxi162Scf00338g00523 Petunia axillaris HOM05D005268 ORTHO05D011324 8.5e-06 54.3 131 32.8


User provided reference genes

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