Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p46720 Brassica napus HOM05D006880 ORTHO05D008638 2.9e-111 405.2 201 100.0
BcaC02g12236 Brassica carinata HOM05D006880 ORTHO05D008638 1.4e-110 402.9 201 99.5
BcaC05g28570 Brassica carinata HOM05D006880 ORTHO05D008638 1.4e-110 402.9 201 99.5
BolC5t33399H Brassica oleracea HOM05D006880 ORTHO05D008638 1.4e-110 402.9 201 99.5
A05p30800 Brassica napus HOM05D006880 ORTHO05D008638 1.5e-104 382.9 204 95.1
BraA05t21922Z Brassica rapa HOM05D006880 ORTHO05D008638 1.5e-104 382.9 204 95.1
BcaB06g25933 Brassica carinata HOM05D006880 ORTHO05D008638 5.5e-102 374.4 203 94.6
AT3G18800 Arabidopsis thaliana HOM05D006880 ORTHO05D008638 3.6e-101 371.7 201 94.0
Sp3g16890 Schrenkiella parvula HOM05D006880 ORTHO05D008638 3.6e-101 371.7 206 91.7
AL3G32180 Arabidopsis lyrata HOM05D006880 ORTHO05D008638 1.4e-100 369.8 201 93.5
Carub.0003s1862 Capsella rubella HOM05D006880 ORTHO05D008638 2.8e-98 362.1 201 91.5
Aa31LG8G5640 Aethionema arabicum HOM05D006880 ORTHO05D008638 1.4e-97 359.8 201 88.6
CARHR094210 Cardamine hirsuta HOM05D006880 ORTHO05D008638 9.1e-97 357.1 206 90.8
Thhalv10022284m.g Eutrema salsugineum HOM05D006880 ORTHO05D008638 6.5e-95 350.9 204 87.3
Sp1g36150 Schrenkiella parvula HOM05D006880 ORTHO05D008638 9.1e-81 303.9 204 76.0
THA.LOC104821864 Tarenaya hassleriana HOM05D006880 ORTHO05D008638 6.1e-77 291.2 186 78.5
Sabra19G0023300 Salix brachista HOM05D006880 ORTHO05D008638 3.8e-71 271.9 201 72.1
Gorai.002G151100 Gossypium raimondii HOM05D006880 ORTHO05D008638 6.5e-71 271.2 203 72.9
Potri.019G006500 Populus trichocarpa HOM05D006880 ORTHO05D008638 6.5e-71 271.2 201 71.1
Sabra19G0018800 Salix brachista HOM05D006880 ORTHO05D008638 1.1e-70 270.4 201 71.6
Cpa.g.sc453.1 Carica papaya HOM05D006880 ORTHO05D008638 2.5e-70 269.2 206 68.9
Gorai.011G115200 Gossypium raimondii HOM05D006880 ORTHO05D008638 3.2e-70 268.9 201 72.1
Duzib147G0678 Durio zibethinus HOM05D006880 ORTHO05D008638 4.2e-70 268.5 204 70.6
Gohir.A10G083300 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.2e-70 268.5 201 72.1
Gohir.D10G105600 Gossypium hirsutum HOM05D006880 ORTHO05D008638 4.2e-70 268.5 201 72.1
Sabra16G0194800 Salix brachista HOM05D006880 ORTHO05D008638 1.6e-69 266.5 203 70.4
Duzib187G0911 Durio zibethinus HOM05D006880 ORTHO05D008638 3.6e-69 265.4 202 71.8
Prupe.6G162500 Prunus persica HOM05D006880 ORTHO05D008638 4.7e-69 265.0 202 70.3
FAN19G0460 Fragaria x ananassa HOM05D006880 ORTHO05D008638 8.0e-69 264.2 201 70.1
Thecc.01G120600 Theobroma cacao HOM05D006880 ORTHO05D008638 8.0e-69 264.2 205 70.2
COL.COLO4_22415 Corchorus olitorius HOM05D006880 ORTHO05D008638 1.0e-68 263.8 205 70.2
Atru.chr4.544 Acer truncatum HOM05D006880 ORTHO05D008638 1.4e-68 263.5 202 70.8
Ciclev10026534m.g Citrus clementina HOM05D006880 ORTHO05D008638 2.3e-68 262.7 204 71.6
Potri.001G309000 Populus trichocarpa HOM05D006880 ORTHO05D008638 2.3e-68 262.7 186 72.6
arahy.Tifrunner.gnm1.ann1.546D2B Arachis hypogaea HOM05D006880 ORTHO05D008638 4.0e-68 261.9 201 69.2
CANSAT01G0776 Cannabis sativa HOM05D006880 ORTHO05D008638 4.0e-68 261.9 202 70.3
Phvul.009G147400 Phaseolus vulgaris HOM05D006880 ORTHO05D008638 4.0e-68 261.9 208 68.8
RcHm_v2.0_Chr2g0119191 Rosa chinensis HOM05D006880 ORTHO05D008638 4.0e-68 261.9 201 69.2
FvH4_1g23610 Fragaria vesca HOM05D006880 ORTHO05D008638 6.8e-68 261.2 201 69.7
FAN23G3120 Fragaria x ananassa HOM05D006880 ORTHO05D008638 6.8e-68 261.2 201 69.7
FAN28G1236 Fragaria x ananassa HOM05D006880 ORTHO05D008638 6.8e-68 261.2 201 69.7
QL06p051802 Quercus lobata HOM05D006880 ORTHO05D008638 1.2e-67 260.4 203 70.0
CiPaw.03G123600 Carya illinoinensis HOM05D006880 ORTHO05D008638 1.5e-67 260.0 208 68.3
Oeu054906.1 Olea europaea HOM05D006880 ORTHO05D008638 1.5e-67 260.0 205 68.3
Ca_16914_v3 Cicer arietinum L. HOM05D006880 ORTHO05D008638 2.0e-67 259.6 201 68.2
FAN26G3452 Fragaria x ananassa HOM05D006880 ORTHO05D008638 2.0e-67 259.6 201 69.7
TWI79G0189 Tripterygium wilfordii HOM05D006880 ORTHO05D008638 2.0e-67 259.6 201 70.1
CSS0034618 Camellia sinensis var. sinensis HOM05D006880 ORTHO05D008638 2.6e-67 259.2 216 65.7
ClCG01G015680 Citrullus lanatus HOM05D006880 ORTHO05D008638 3.4e-67 258.8 199 70.9
HanXRQChr02g0039401 Helianthus annuus HOM05D006880 ORTHO05D008638 3.4e-67 258.8 201 68.7
PGR119G1657 Punica granatum HOM05D006880 ORTHO05D008638 4.4e-67 258.5 202 68.8
Glyma.06G149800 Glycine max HOM05D006880 ORTHO05D008638 7.5e-67 257.7 201 69.2
Glyma.09G116700 Glycine max HOM05D006880 ORTHO05D008638 7.5e-67 257.7 201 68.2
TPR.G18722 Trifolium pratense HOM05D006880 ORTHO05D008638 9.8e-67 257.3 202 68.3
Cc07_g17330 Coffea canephora HOM05D006880 ORTHO05D008638 1.7e-66 256.5 201 67.2
Manes.12G148400 Manihot esculenta HOM05D006880 ORTHO05D008638 1.7e-66 256.5 186 72.0
PSO675G8574 Papaver somniferum HOM05D006880 ORTHO05D008638 1.7e-66 256.5 193 69.9
Lalb_Chr08g0238661 Lupinus albus HOM05D006880 ORTHO05D008638 2.8e-66 255.8 201 69.7
Lalb_Chr11g0068241 Lupinus albus HOM05D006880 ORTHO05D008638 2.8e-66 255.8 204 68.1
Psat5g063920 Pisum sativum HOM05D006880 ORTHO05D008638 2.8e-66 255.8 202 68.3
Lj1g0010031 Lotus japonicus HOM05D006880 ORTHO05D008638 3.7e-66 255.4 201 68.7
AUR62017937 Chenopodium quinoa HOM05D006880 ORTHO05D008638 4.8e-66 255.0 207 67.1
MELO3C008029.2 Cucumis melo HOM05D006880 ORTHO05D008638 4.8e-66 255.0 200 71.0
CiPaw.04G083800 Carya illinoinensis HOM05D006880 ORTHO05D008638 6.3e-66 254.6 202 66.8
Glyma.09G116500 Glycine max HOM05D006880 ORTHO05D008638 6.3e-66 254.6 201 68.2
Medtr3g095480 Medicago truncatula HOM05D006880 ORTHO05D008638 6.3e-66 254.6 204 67.2
PSO541G1054 Papaver somniferum HOM05D006880 ORTHO05D008638 8.3e-66 254.2 193 69.4
BcaC07g37070 Brassica carinata HOM05D006880 ORTHO05D008638 1.4e-65 253.4 203 68.5
arahy.Tifrunner.gnm1.ann1.91R8ME Arachis hypogaea HOM05D006880 ORTHO05D008638 1.8e-65 253.1 201 67.7
MD01G1016600 Malus domestica HOM05D006880 ORTHO05D008638 3.1e-65 252.3 204 65.2
ECA247G1470 Erigeron canadensis HOM05D006880 ORTHO05D008638 5.4e-65 251.5 201 68.2
Hma1.2p1_0006F.1_g004965 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 5.4e-65 251.5 205 67.3
Hma1.2p1_0025F.1_g016260 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 5.4e-65 251.5 205 67.3
Hma1.2p1_1667F.1_g296585 Hydrangea macrophylla HOM05D006880 ORTHO05D008638 5.4e-65 251.5 205 67.3
SGA_v2.0_scaffold178G39501 Striga asiatica HOM05D006880 ORTHO05D008638 1.2e-64 250.4 186 69.9
Actinidia06675 Actinidia chinensis HOM05D006880 ORTHO05D008638 2.7e-64 249.2 202 66.3
Aqoxy5G02095 Aquilegia oxysepala HOM05D006880 ORTHO05D008638 2.7e-64 249.2 192 68.2
Migut.H01108 Erythranthe guttata HOM05D006880 ORTHO05D008638 7.7e-64 247.7 186 68.8
Lj2A591T43 Lonicera japonica HOM05D006880 ORTHO05D008638 2.9e-63 245.7 201 64.7
Solyc11g005390.3 Solanum lycopersicum HOM05D006880 ORTHO05D008638 2.9e-63 245.7 202 66.8
Sopen11g001400 Solanum pennellii HOM05D006880 ORTHO05D008638 2.9e-63 245.7 202 66.8
HanXRQChr05g0137731 Helianthus annuus HOM05D006880 ORTHO05D008638 6.6e-63 244.6 201 65.2
TAR628G0678 Trochodendron aralioides HOM05D006880 ORTHO05D008638 6.6e-63 244.6 201 65.2
Nn1g06089 Nelumbo nucifera HOM05D006880 ORTHO05D008638 8.6e-63 244.2 201 66.2
PGSC0003DMG400003965 Solanum tuberosum HOM05D006880 ORTHO05D008638 2.5e-62 242.7 186 69.4
GSVIVG01026589001 Vitis vinifera HOM05D006880 ORTHO05D008638 5.5e-62 241.5 178 70.2
CDE08G0745 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 2.1e-61 239.6 201 66.7
HPP92_025026 Vanilla planifolia HOM05D006880 ORTHO05D008638 2.3e-60 236.1 187 63.6
HPP92_025033 Vanilla planifolia HOM05D006880 ORTHO05D008638 2.3e-60 236.1 187 63.6
Sed0021560 Sechium edule HOM05D006880 ORTHO05D008638 3.0e-60 235.7 195 64.1
A08p04110 Brassica napus HOM05D006880 ORTHO05D008638 5.7e-59 231.5 149 77.2
ATR0772G040 Amborella trichopoda HOM05D006880 ORTHO05D008638 9.8e-59 230.7 201 63.2
Gohir.D11G233000 Gossypium hirsutum HOM05D006880 ORTHO05D008638 2.2e-58 229.6 205 64.9
Sc03g0004730 Simmondsia chinensis HOM05D006880 ORTHO05D008638 4.9e-58 228.4 184 65.2
MBI02_g23402_MAGBIO Magnolia biondii HOM05D006880 ORTHO05D008638 1.1e-57 227.3 189 62.4
CsaV3_6G041940 Cucumis sativus L. HOM05D006880 ORTHO05D008638 8.9e-52 207.6 174 67.2
Nn5g28731 Nelumbo nucifera HOM05D006880 ORTHO05D008638 1.5e-51 206.8 186 59.1
Dinv09943 Davidia involucrata HOM05D006880 ORTHO05D008638 8.3e-50 201.1 154 68.8
Peaxi162Scf00025g02313 Petunia axillaris HOM05D006880 ORTHO05D008638 2.0e-48 196.4 176 61.9
CDE06G1704 Ceratophyllum demersum HOM05D006880 ORTHO05D008638 1.0e-47 194.1 153 68.0
Mapoly0012s0135 Marchantia polymorpha HOM05D006880 ORTHO05D008638 6.4e-42 174.9 196 50.0
SMO351G0309 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 1.3e-39 167.2 186 50.0
SMO196G0105 Selaginella moellendorffii HOM05D006880 ORTHO05D008638 2.3e-39 166.4 184 46.7
AagrBONN_evm.TU.Sc2ySwM_228.250 Anthoceros agrestis HOM05D006880 ORTHO05D008638 1.8e-36 156.8 199 44.7
Nn3g21133 Nelumbo nucifera HOM05D006880 ORTHO05D008638 3.7e-34 149.1 185 48.6
Nitab4.5_0023130g0010 Nicotiana tabacum HOM05D006880 ORTHO05D008638 6.0e-32 141.7 117 61.5
Nitab4.5_0011433g0020 Nicotiana tabacum HOM05D006880 ORTHO05D008638 7.8e-32 141.4 117 61.5
DCAR_016722 Daucus carota HOM05D006880 ORTHO05D008638 2.3e-31 139.8 108 67.6
Os04g0687200 Oryza sativa ssp. japonica HOM05D006880 ORTHO05D008638 3.3e-30 136.0 133 53.4
Nn8g40983 Nelumbo nucifera HOM05D006880 ORTHO05D008638 2.6e-27 126.3 184 43.5
Eucgr.B01306 Eucalyptus grandis HOM05D006880 ORTHO05D008638 3.6e-21 105.9 131 47.3
Lj6g0028046 Lotus japonicus HOM05D006880 ORTHO05D008638 3.0e-15 86.3 63 68.3
BraA08t32436Z Brassica rapa HOM05D006880 ORTHO05D008638 1.9e-14 83.6 56 76.8
Eucgr.B00961 Eucalyptus grandis HOM05D006880 ORTHO05D008638 6.4e-10 68.6 46 71.7
Nn3g19205 Nelumbo nucifera HOM05D006880 ORTHO05D008638 6.4e-10 68.6 47 70.2


User provided reference genes

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