Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p43720 Brassica napus HOM05D002065 ORTHO05D002050 1.7e-48 195.7 100 100.0
BolC5t33085H Brassica oleracea HOM05D002065 ORTHO05D002050 4.6e-41 171.0 99 90.9
BcaB06g26124 Brassica carinata HOM05D002065 ORTHO05D002050 4.0e-13 78.2 65 64.6
BcaB04g19117 Brassica carinata HOM05D002065 ORTHO05D002050 9.0e-13 77.0 69 62.3
BcaC09g49003 Brassica carinata HOM05D002065 ORTHO05D002050 9.0e-13 77.0 69 62.3
A03p41840 Brassica napus HOM05D002065 ORTHO05D002050 9.0e-13 77.0 69 62.3
C01p43600 Brassica napus HOM05D002065 ORTHO05D002050 9.0e-13 77.0 69 62.3
BolC1t04321H Brassica oleracea HOM05D002065 ORTHO05D002050 9.0e-13 77.0 69 62.3
BraA03t13337Z Brassica rapa HOM05D002065 ORTHO05D002050 9.0e-13 77.0 69 62.3
BcaB04g20643 Brassica carinata HOM05D002065 ORTHO05D002050 2.0e-12 75.9 69 60.9
A01p34210 Brassica napus HOM05D002065 ORTHO05D002050 2.6e-12 75.5 69 60.9
BraA01t03521Z Brassica rapa HOM05D002065 ORTHO05D002050 2.6e-12 75.5 69 60.9
CARHR096380 Cardamine hirsuta HOM05D002065 ORTHO05D002050 5.8e-12 74.3 69 53.6
BcaC01g03546 Brassica carinata HOM05D002065 ORTHO05D002050 1.0e-11 73.6 69 60.9
C03p51220 Brassica napus HOM05D002065 ORTHO05D002050 1.0e-11 73.6 69 60.9
BolC3t17412H Brassica oleracea HOM05D002065 ORTHO05D002050 1.0e-11 73.6 69 60.9
Sp3g18610 Schrenkiella parvula HOM05D002065 ORTHO05D002050 2.2e-11 72.4 69 60.9
Thhalv10022399m.g Eutrema salsugineum HOM05D002065 ORTHO05D002050 1.9e-10 69.3 60 60.0
AT3G20610 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 2.5e-10 68.9 87 50.6
Sp3g18640 Schrenkiella parvula HOM05D002065 ORTHO05D002050 2.7e-09 65.5 79 51.9
AL3G34460 Arabidopsis lyrata HOM05D002065 ORTHO05D002050 4.6e-09 64.7 77 51.9
AT3G20590 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 4.6e-09 64.7 77 51.9
BcaB06g26126 Brassica carinata HOM05D002065 ORTHO05D002050 4.6e-09 64.7 69 52.2
BcaC05g28309 Brassica carinata HOM05D002065 ORTHO05D002050 4.6e-09 64.7 69 52.2
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 4.6e-09 64.7 69 52.2
C05p43700 Brassica napus HOM05D002065 ORTHO05D002050 4.6e-09 64.7 69 52.2
BraA05t21707Z Brassica rapa HOM05D002065 ORTHO05D002050 4.6e-09 64.7 69 52.2
AT3G20600 Arabidopsis thaliana HOM05D002065 ORTHO05D002050 1.3e-08 63.2 77 50.6
BcaC05g28307 Brassica carinata HOM05D002065 ORTHO05D002050 1.3e-08 63.2 62 56.5
Sp3g18630 Schrenkiella parvula HOM05D002065 ORTHO05D002050 1.3e-08 63.2 74 48.6
THA.LOC104817885 Tarenaya hassleriana HOM05D002065 ORTHO05D002050 1.3e-08 63.2 62 56.5
Sp3g18650 Schrenkiella parvula HOM05D002065 ORTHO05D002050 3.0e-08 62.0 74 54.1
Carub.0003s2058 Capsella rubella HOM05D002065 ORTHO05D002050 3.9e-08 61.6 77 49.4
AL3G34450 Arabidopsis lyrata HOM05D002065 ORTHO05D002050 1.5e-07 59.7 77 49.4
Carub.0003s2057 Capsella rubella HOM05D002065 ORTHO05D002050 5.7e-07 57.8 78 46.2
Aa31LG8G7400 Aethionema arabicum HOM05D002065 ORTHO05D002050 9.6e-07 57.0 75 46.7
BolC5t33084H Brassica oleracea HOM05D002065 ORTHO05D002050 1.6e-06 56.2 58 51.7
Thhalv10021500m.g Eutrema salsugineum HOM05D002065 ORTHO05D002050 2.1e-06 55.8 74 45.9


User provided reference genes

Program Settings