Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p22860 Brassica napus HOM05D008527 ORTHO05D010701 2.7e-83 312.4 213 100.0
BcaC05g26275 Brassica carinata HOM05D008527 ORTHO05D010701 1.0e-82 310.5 213 99.5
BolC5t30985H Brassica oleracea HOM05D008527 ORTHO05D010701 2.3e-82 309.3 213 99.1
A09p41140 Brassica napus HOM05D008527 ORTHO05D010701 4.1e-79 298.5 213 96.7
BraA09t39607Z Brassica rapa HOM05D008527 ORTHO05D010701 4.1e-79 298.5 213 96.7
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 4.2e-76 288.5 213 83.1
Sp1g20970 Schrenkiella parvula HOM05D008527 ORTHO05D010701 5.0e-45 185.3 218 57.8
BcaB03g11943 Brassica carinata HOM05D008527 ORTHO05D010701 1.2e-43 180.6 219 56.6
BcaB03g11945 Brassica carinata HOM05D008527 ORTHO05D010701 1.2e-43 180.6 219 56.6
A08p28140 Brassica napus HOM05D008527 ORTHO05D010701 7.5e-41 171.4 218 55.0
BraA08t34747Z Brassica rapa HOM05D008527 ORTHO05D010701 7.5e-41 171.4 218 55.0
AL1G37290 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 4.1e-39 165.6 218 53.2
BcaC07g39203 Brassica carinata HOM05D008527 ORTHO05D010701 1.0e-37 161.0 218 56.4
C08p21950 Brassica napus HOM05D008527 ORTHO05D010701 1.0e-37 161.0 218 56.4
BolC8t49831H Brassica oleracea HOM05D008527 ORTHO05D010701 1.0e-37 161.0 218 56.4
BcaC06g35042 Brassica carinata HOM05D008527 ORTHO05D010701 3.2e-36 156.0 219 53.0
A07p13850 Brassica napus HOM05D008527 ORTHO05D010701 3.2e-36 156.0 219 53.0
BolC7t42561H Brassica oleracea HOM05D008527 ORTHO05D010701 3.2e-36 156.0 219 53.0
BraA07t29139Z Brassica rapa HOM05D008527 ORTHO05D010701 5.5e-36 155.2 219 52.1
C07p20400 Brassica napus HOM05D008527 ORTHO05D010701 1.2e-35 154.1 219 52.5
Thhalv10008871m.g Eutrema salsugineum HOM05D008527 ORTHO05D010701 2.0e-33 146.7 218 50.5
BcaNung06957 Brassica carinata HOM05D008527 ORTHO05D010701 1.5e-28 130.6 218 51.4
BcaB03g14145 Brassica carinata HOM05D008527 ORTHO05D010701 2.5e-28 129.8 220 49.1
Carub.0001s2307 Capsella rubella HOM05D008527 ORTHO05D010701 8.9e-26 121.3 221 43.9
CARHR023970 Cardamine hirsuta HOM05D008527 ORTHO05D010701 5.7e-25 118.6 225 44.0
AT1G23530 Arabidopsis thaliana HOM05D008527 ORTHO05D010701 7.8e-22 108.2 222 40.5
Aa31LG7G7580 Aethionema arabicum HOM05D008527 ORTHO05D010701 8.6e-21 104.8 225 44.9
AL2G29840 Arabidopsis lyrata HOM05D008527 ORTHO05D010701 6.8e-18 95.1 131 60.3
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 8.9e-18 94.7 128 47.7
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 3.4e-17 92.8 213 46.0
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 8.3e-16 88.2 181 40.9
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 9.2e-15 84.7 128 45.3
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 9.2e-15 84.7 128 45.3
THA.LOC104824704 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 1.6e-14 84.0 217 41.9
BolC2t08819H Brassica oleracea HOM05D008527 ORTHO05D010701 2.7e-14 83.2 128 45.3
Thhalv10019272m.g Eutrema salsugineum HOM05D008527 ORTHO05D010701 3.5e-14 82.8 83 61.4
Sp5g25540 Schrenkiella parvula HOM05D008527 ORTHO05D010701 2.3e-13 80.1 83 57.8
BcaC03g15190 Brassica carinata HOM05D008527 ORTHO05D010701 5.0e-13 79.0 128 54.7
C02p27710 Brassica napus HOM05D008527 ORTHO05D010701 5.0e-13 79.0 128 54.7
BcaB05g24574 Brassica carinata HOM05D008527 ORTHO05D010701 5.6e-12 75.5 72 61.1
BcaB05g24577 Brassica carinata HOM05D008527 ORTHO05D010701 5.6e-12 75.5 72 61.1
BcaC08g46489 Brassica carinata HOM05D008527 ORTHO05D010701 2.1e-11 73.6 80 55.0
C06p44320 Brassica napus HOM05D008527 ORTHO05D010701 2.1e-11 73.6 80 55.0
BolC6t39502H Brassica oleracea HOM05D008527 ORTHO05D010701 2.1e-11 73.6 80 55.0
AT1G70470 Arabidopsis thaliana HOM05D008527 ORTHO05D010701 2.8e-11 73.2 71 59.2
A07p36840 Brassica napus HOM05D008527 ORTHO05D010701 6.2e-11 72.0 126 47.6
A07p31080 Brassica napus HOM05D008527 ORTHO05D010701 4.4e-09 65.9 127 40.9
BraA07t30743Z Brassica rapa HOM05D008527 ORTHO05D010701 4.4e-09 65.9 127 40.9
CARHR063630 Cardamine hirsuta HOM05D008527 ORTHO05D010701 2.2e-08 63.5 73 56.2
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 7.1e-07 58.5 116 47.4
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 2.1e-06 57.0 114 40.4
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 3.5e-06 56.2 123 33.3
BcaB03g14805 Brassica carinata HOM05D008527 ORTHO05D010701 3.5e-06 56.2 80 47.5
BraA07t31250Z Brassica rapa HOM05D008527 ORTHO05D010701 3.5e-06 56.2 80 47.5
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 3.5e-06 56.2 111 37.8
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 6.0e-06 55.5 117 35.9
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 7.8e-06 55.1 115 37.4
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 7.8e-06 55.1 116 37.9


User provided reference genes

Program Settings