Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 1.1e-73 280.0 152 100.0
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 9.0e-73 276.9 152 98.7
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 1.9e-70 269.2 152 96.1
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 4.2e-70 268.1 152 95.4
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 1.1e-62 243.4 152 88.8
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 2.3e-60 235.7 152 86.2
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 3.0e-60 235.3 153 86.3
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 4.3e-59 231.5 153 85.6
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 2.2e-58 229.2 144 88.2
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 4.8e-58 228.0 144 88.2
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 2.0e-56 222.6 152 82.2
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 4.5e-56 221.5 152 82.2
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 7.7e-56 220.7 152 81.6
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 2.2e-55 219.2 150 81.3
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 1.1e-54 216.9 153 81.0
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 1.2e-53 213.4 152 78.3
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.5e-51 206.5 137 85.4
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 9.7e-51 203.8 152 74.3
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 1.7e-42 176.4 125 84.0
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 3.6e-37 158.7 93 93.5
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 3.0e-36 155.6 143 65.0
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 9.1e-33 144.1 150 51.3
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 1.2e-32 143.7 150 51.3
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 1.6e-32 143.3 148 55.4
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 1.6e-32 143.3 150 52.0
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 3.5e-32 142.1 150 50.7
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 2.9e-31 139.0 150 53.3
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 5.0e-31 138.3 151 50.3
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 6.5e-31 137.9 160 50.0
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 9.4e-30 134.0 152 52.6
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.6e-29 133.3 162 48.8
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.0e-28 130.6 149 51.0
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 5.2e-28 128.3 149 50.3
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 4.4e-27 125.2 152 46.7
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 1.7e-26 123.2 127 55.9
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 2.2e-26 122.9 146 47.9
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 2.8e-26 122.5 123 56.1
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 4.8e-26 121.7 146 47.3
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 8.3e-26 120.9 147 48.3
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 1.4e-25 120.2 130 53.8
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 2.4e-25 119.4 131 54.2
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 2.0e-24 116.3 101 55.4
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 2.0e-24 116.3 152 45.4
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 2.7e-24 115.9 149 42.3
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.7e-24 115.9 143 48.3
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.7e-24 115.9 143 48.3
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 4.5e-24 115.2 128 52.3
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 4.5e-24 115.2 148 45.9
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 4.5e-24 115.2 146 47.3
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 5.9e-24 114.8 138 49.3
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 7.7e-24 114.4 153 44.4
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 7.7e-24 114.4 140 47.1
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 1.7e-23 113.2 146 45.9
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 2.9e-23 112.5 146 47.3
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.8e-23 112.1 144 45.8
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 5.0e-23 111.7 155 41.9
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 6.5e-23 111.3 112 54.5
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.1e-22 110.5 120 49.2
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.1e-22 110.5 146 45.2
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 2.5e-22 109.4 145 46.2
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.5e-22 109.4 145 46.2
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.5e-22 109.4 145 46.2
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 2.5e-22 109.4 149 46.3
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 5.5e-22 108.2 157 42.0
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 7.2e-22 107.8 144 44.4
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 1.2e-21 107.1 146 38.4
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 2.1e-21 106.3 145 45.5
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 8.0e-21 104.4 155 39.4
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 1.4e-20 103.6 67 67.2
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 1.8e-20 103.2 152 40.8
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 4.0e-20 102.1 137 41.6
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 8.8e-20 100.9 137 40.9
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 1.2e-19 100.5 134 42.5
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 4.4e-19 98.6 161 39.8
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 4.4e-19 98.6 161 39.8
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 5.7e-19 98.2 137 46.7
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 5.7e-19 98.2 120 47.5
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 2.2e-18 96.3 137 41.6
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 4.9e-18 95.1 152 42.8
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 6.3e-18 94.7 146 39.0
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 6.3e-18 94.7 157 37.6
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.1e-17 94.0 100 49.0
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.4e-17 93.6 152 41.4
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 1.4e-17 93.6 158 37.3
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 1.0e-15 87.4 113 46.9
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 1.7e-15 86.7 139 37.4
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 2.9e-15 85.9 112 44.6
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 6.6e-15 84.7 127 40.2
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 1.9e-14 83.2 115 40.9
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 2.5e-14 82.8 130 40.8
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 2.5e-14 82.8 141 39.0
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.8e-12 76.6 97 48.5
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 4.0e-12 75.5 99 43.4
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 5.2e-12 75.1 103 51.5
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 2.6e-11 72.8 130 35.4
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 7.5e-11 71.2 112 38.4
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 9.8e-11 70.9 131 35.9
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 2.2e-10 69.7 124 37.1
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 4.9e-10 68.6 149 34.9
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 6.4e-10 68.2 150 35.3
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 8.3e-10 67.8 104 37.5
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 2.4e-09 66.2 121 31.4
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 4.1e-09 65.5 107 37.4
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 1.2e-08 63.9 80 50.0
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 8.6e-07 57.8 58 39.7
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 8.6e-07 57.8 58 39.7


User provided reference genes

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