Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p07390 Brassica napus HOM05D009911 ORTHO05D009712 5.8e-89 330.9 169 100.0
BolC5t29496H Brassica oleracea HOM05D009911 ORTHO05D009712 6.5e-88 327.4 169 98.2
BraA06t23825Z Brassica rapa HOM05D009911 ORTHO05D009712 2.6e-81 305.4 169 94.1
A06p06120 Brassica napus HOM05D009911 ORTHO05D009712 1.0e-80 303.5 169 93.5
C05p07360 Brassica napus HOM05D009911 ORTHO05D009712 1.0e-56 223.8 166 72.3
BraA06t23818Z Brassica rapa HOM05D009911 ORTHO05D009712 5.0e-56 221.5 169 71.0
BcaC05g24790 Brassica carinata HOM05D009911 ORTHO05D009712 1.5e-55 219.9 170 71.2
A06p06070 Brassica napus HOM05D009911 ORTHO05D009712 1.5e-55 219.9 169 70.4
BolC5t29493H Brassica oleracea HOM05D009911 ORTHO05D009712 1.5e-55 219.9 170 71.2
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 2.0e-52 209.5 175 66.9
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 9.7e-52 207.2 175 66.3
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 7.0e-50 201.1 175 64.6
Sp1g07980 Schrenkiella parvula HOM05D009911 ORTHO05D009712 2.2e-48 196.1 171 63.7
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 1.6e-46 189.9 175 60.6
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 9.1e-42 174.1 175 55.4
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 9.1e-42 174.1 172 55.8
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 6.6e-40 167.9 175 53.1
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 6.3e-35 151.4 175 49.7
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 2.3e-32 142.9 173 44.5
C08p49490 Brassica napus HOM05D009911 ORTHO05D009712 2.1e-30 136.3 174 50.6
BcaC07g41882 Brassica carinata HOM05D009911 ORTHO05D009712 2.9e-27 125.9 174 48.9
BcaC07g41884 Brassica carinata HOM05D009911 ORTHO05D009712 3.1e-21 105.9 108 59.3
BolC5t29495H Brassica oleracea HOM05D009911 ORTHO05D009712 8.6e-16 87.8 88 59.1
A09p65510 Brassica napus HOM05D009911 ORTHO05D009712 1.4e-13 80.5 111 45.9
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 8.3e-11 71.2 162 28.4
BraA09t41896Z Brassica rapa HOM05D009911 ORTHO05D009712 7.1e-10 68.2 68 52.9
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 1.6e-09 67.0 167 26.3
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 6.0e-09 65.1 168 29.8
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 7.8e-09 64.7 162 27.2
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 1.0e-08 64.3 164 27.4
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 1.7e-08 63.5 169 29.6
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 2.5e-07 59.7 160 27.5
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 3.3e-07 59.3 160 27.5
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 4.3e-07 58.9 163 23.9
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 7.3e-07 58.2 161 26.1
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 1.2e-06 57.4 157 22.9
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 2.1e-06 56.6 151 25.8
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 4.7e-06 55.5 173 22.5
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 6.2e-06 55.1 167 24.6


User provided reference genes

Program Settings