Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p44060 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-27 125.2 60 100.0
C04p44100 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-27 125.2 60 100.0
C04p44140 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-27 125.2 60 100.0
BolC4t25987H Brassica oleracea HOM05D000353 ORTHO05D000174 1.7e-27 125.2 60 100.0
C04p44030 Brassica napus HOM05D000353 ORTHO05D000174 5.0e-27 123.6 60 98.3
BolC9t56976H Brassica oleracea HOM05D000353 ORTHO05D000174 5.0e-27 123.6 60 98.3
C01p30060 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-26 122.1 59 98.3
C03p52500 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-26 122.1 59 98.3
C09p46540 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-26 121.3 59 96.6
BolC9t57507H Brassica oleracea HOM05D000353 ORTHO05D000174 9.5e-26 119.4 59 94.9
BraA06t25438Z Brassica rapa HOM05D000353 ORTHO05D000174 3.5e-20 100.9 59 81.4
C04p41240 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-16 89.4 54 79.6
BraA09t37616Z Brassica rapa HOM05D000353 ORTHO05D000174 1.4e-16 89.0 52 80.8
BcaC04g20218 Brassica carinata HOM05D000353 ORTHO05D000174 6.8e-16 86.7 41 95.1
BraA06t25441Z Brassica rapa HOM05D000353 ORTHO05D000174 1.5e-15 85.5 52 78.8
A06p35790 Brassica napus HOM05D000353 ORTHO05D000174 2.6e-15 84.7 54 74.1
C05p58280 Brassica napus HOM05D000096 ORTHO05D000045 1.0e-11 72.8 59 55.9
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 1.7e-11 72.0 59 54.2
A02p24410 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-11 71.6 59 54.2
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-11 71.6 59 54.2
C05p39980 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-11 71.6 59 54.2
BraA02t07430Z Brassica rapa HOM05D000353 ORTHO05D000174 2.3e-11 71.6 59 54.2
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
BcaC05g29111 Brassica carinata HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
BcaC06g33697 Brassica carinata HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
A09p27800 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
C05p53400 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
BraA09t38350Z Brassica rapa HOM05D000353 ORTHO05D000174 3.9e-11 70.9 59 54.2
BolC9t54833H Brassica oleracea HOM05D000096 ORTHO05D000045 8.6e-11 69.7 59 52.5
BolC5t34002H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-10 69.3 59 52.5
BolC2t09050H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-10 68.9 59 52.5
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-10 68.6 59 52.5
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-10 68.2 59 52.5
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 2.5e-10 68.2 59 52.5
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-10 67.8 59 52.5
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-10 67.8 59 52.5
BolC6t36183H Brassica oleracea HOM05D000353 ORTHO05D000174 4.3e-10 67.4 59 52.5
BcaB02g11004 Brassica carinata HOM05D000353 ORTHO05D000174 5.6e-10 67.0 59 54.2
BcaB08g35053 Brassica carinata HOM05D000353 ORTHO05D000174 5.6e-10 67.0 59 50.8
BcaC08g43681 Brassica carinata HOM05D000353 ORTHO05D000174 5.6e-10 67.0 59 52.5
BcaB02g06410 Brassica carinata HOM05D000353 ORTHO05D000174 7.3e-10 66.6 59 54.2
BcaB03g14941 Brassica carinata HOM05D000353 ORTHO05D000174 7.3e-10 66.6 59 50.8
BcaC03g14334 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-09 65.9 59 50.8
BcaB03g15253 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-09 65.5 59 52.5
BcaB04g17265 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-09 65.1 59 52.5
BcaB04g18043 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-09 65.1 59 52.5
BcaB04g18330 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-09 65.1 59 52.5
BcaC08g47173 Brassica carinata HOM05D000353 ORTHO05D010037 2.1e-09 65.1 59 52.5
BraA01t02710Z Brassica rapa HOM05D000353 ORTHO05D000174 2.1e-09 65.1 65 49.2
C05p33340 Brassica napus HOM05D000353 ORTHO05D000174 2.8e-09 64.7 59 49.2
BcaC03g14899 Brassica carinata HOM05D000353 ORTHO05D000174 3.6e-09 64.3 59 50.8
A09p11230 Brassica napus HOM05D000353 ORTHO05D000174 3.6e-09 64.3 60 50.0
C03p69980 Brassica napus HOM05D000353 ORTHO05D000174 6.2e-09 63.5 56 53.6
BraA01t02840Z Brassica rapa HOM05D000353 ORTHO05D000174 6.2e-09 63.5 56 48.2
BcaB03g15976 Brassica carinata HOM05D000353 ORTHO05D000174 8.1e-09 63.2 59 50.8
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 8.1e-09 63.2 59 50.8
C09p64200 Brassica napus HOM05D000353 ORTHO05D000174 8.1e-09 63.2 54 51.9
BolC9t59257H Brassica oleracea HOM05D000353 ORTHO05D000174 8.1e-09 63.2 53 50.9
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 8.1e-09 63.2 59 50.8
BraA06t25279Z Brassica rapa HOM05D000353 ORTHO05D000174 1.1e-08 62.8 52 51.9
AL1G26420 Arabidopsis lyrata HOM05D003358 ORTHO05D003864 1.8e-08 62.0 59 45.8
A07p14780 Brassica napus HOM05D000353 ORTHO05D000174 1.8e-08 62.0 54 50.0
Thhalv10002267m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.3e-08 61.6 59 50.8
BcaB01g01518 Brassica carinata HOM05D000353 ORTHO05D000174 5.2e-08 60.5 59 45.8
A09p37000 Brassica napus HOM05D000353 ORTHO05D000174 5.2e-08 60.5 59 45.8
C05p35900 Brassica napus HOM05D000353 ORTHO05D000174 5.2e-08 60.5 52 51.9
Thhalv10027242m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.8e-08 60.1 59 49.2
Thhalv10029157m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.8e-08 60.1 59 49.2
BolC2t10629H Brassica oleracea HOM05D000353 ORTHO05D000174 8.9e-08 59.7 59 49.2
Thhalv10029126m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.5e-07 58.9 59 47.5
BolC6t36980H Brassica oleracea HOM05D000353 ORTHO05D013780 2.0e-07 58.5 57 49.1
Carub.0016s0007 Capsella rubella HOM05D000353 ORTHO05D000174 3.4e-07 57.8 59 47.5
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 4.4e-07 57.4 59 47.5
BolC6t39887H Brassica oleracea HOM05D000353 ORTHO05D000174 5.8e-07 57.0 57 45.6
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.9e-07 56.2 59 45.8
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.9e-07 56.2 59 45.8
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.9e-07 56.2 59 45.8
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.9e-07 56.2 59 45.8
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.9e-07 56.2 59 45.8
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.9e-07 56.2 59 45.8
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 9.9e-07 56.2 59 45.8
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.9e-07 56.2 59 45.8
Carub.0006s2622 Capsella rubella HOM05D000353 ORTHO05D000174 1.3e-06 55.8 59 47.5
Thhalv10002946m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.3e-06 55.8 59 45.8
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.7e-06 55.5 59 45.8
BolC5t32309H Brassica oleracea HOM05D000353 ORTHO05D000174 2.2e-06 55.1 69 42.0
Thhalv10026883m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.2e-06 55.1 59 44.1
Carub.0004s0702 Capsella rubella HOM05D000353 ORTHO05D000174 2.9e-06 54.7 59 45.8
Aqoxy4G01630 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 3.7e-06 54.3 58 46.6
Carub.0012s0011 Capsella rubella HOM05D000353 ORTHO05D000174 4.9e-06 53.9 59 45.8


User provided reference genes

Program Settings