Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p38010 Brassica napus HOM05D004414 ORTHO05D028135 2.0e-86 322.4 163 100.0
BcaC02g09064 Brassica carinata HOM05D004414 ORTHO05D001824 5.2e-50 201.4 102 98.0
Sp5g07920 Schrenkiella parvula HOM05D004414 ORTHO05D001824 7.5e-41 171.0 123 71.5
Thhalv10010203m.g Eutrema salsugineum HOM05D004414 ORTHO05D001824 1.3e-37 160.2 124 68.5
A07p22140 Brassica napus HOM05D004414 ORTHO05D001824 2.5e-36 156.0 132 65.9
BraA07t29897Z Brassica rapa HOM05D004414 ORTHO05D001824 2.5e-36 156.0 130 66.9
BcaC08g44684 Brassica carinata HOM05D004414 ORTHO05D001824 9.4e-36 154.1 137 62.8
C06p22190 Brassica napus HOM05D004414 ORTHO05D001824 9.4e-36 154.1 137 62.8
BolC6t37405H Brassica oleracea HOM05D004414 ORTHO05D001824 9.4e-36 154.1 137 62.8
BcaB02g07735 Brassica carinata HOM05D004414 ORTHO05D001824 2.1e-35 152.9 124 66.1
AL5G35550 Arabidopsis lyrata HOM05D004414 ORTHO05D001824 3.6e-35 152.1 123 67.5
BolC4t25374H Brassica oleracea HOM05D037785 ORTHO05D028135 1.8e-34 149.8 84 92.9
CARHR164400 Cardamine hirsuta HOM05D004414 ORTHO05D001824 5.2e-34 148.3 117 69.2
Carub.0005s2112 Capsella rubella HOM05D004414 ORTHO05D001824 8.8e-34 147.5 133 64.7
Aa31sc434G10 Aethionema arabicum HOM05D004414 ORTHO05D001824 1.8e-26 123.2 123 53.7
BcaC07g39819 Brassica carinata HOM05D004414 ORTHO05D001824 3.2e-23 112.5 189 42.3
BcaB01g00189 Brassica carinata HOM05D004414 ORTHO05D001824 2.3e-21 106.3 205 39.0
BcaC07g39817 Brassica carinata HOM05D004414 ORTHO05D001824 2.3e-21 106.3 205 39.0
AT3G54500 Arabidopsis thaliana HOM05D004414 ORTHO05D001824 3.3e-20 102.4 143 46.2
THA.LOC104801739 Tarenaya hassleriana HOM05D004414 ORTHO05D001824 4.3e-20 102.1 128 46.9
THA.LOC104824187 Tarenaya hassleriana HOM05D004414 ORTHO05D001824 7.3e-20 101.3 123 48.0
Duzib114G0298 Durio zibethinus HOM05D004414 ORTHO05D001824 1.0e-13 80.9 128 39.8
Dinv32037 Davidia involucrata HOM05D004414 ORTHO05D001824 1.1e-12 77.4 131 37.4
COL.COLO4_09982 Corchorus olitorius HOM05D004414 ORTHO05D001824 4.3e-12 75.5 121 39.7
Cpa.g.sc223.17 Carica papaya HOM05D004414 ORTHO05D001824 9.5e-12 74.3 122 41.0
A04p05330 Brassica napus HOM05D037785 ORTHO05D028135 3.6e-11 72.4 79 54.4
BraA04t16233Z Brassica rapa HOM05D037785 ORTHO05D028135 3.6e-11 72.4 79 54.4
Potri.003G200600 Populus trichocarpa HOM05D004414 ORTHO05D001824 3.6e-11 72.4 118 38.1
Potri.T127206 Populus trichocarpa HOM05D004414 ORTHO05D001824 3.6e-11 72.4 118 38.1
Duzib106G1605 Durio zibethinus HOM05D004414 ORTHO05D001824 4.7e-11 72.0 117 38.5
Sabra03G0148200 Salix brachista HOM05D004414 ORTHO05D001824 4.7e-11 72.0 110 40.0
Thecc.10G167000 Theobroma cacao HOM05D004414 ORTHO05D001824 4.7e-11 72.0 118 39.0
MELO3C012461.2 Cucumis melo HOM05D004414 ORTHO05D001824 1.8e-10 70.1 105 43.8
Gohir.D05G282800 Gossypium hirsutum HOM05D004414 ORTHO05D001824 6.8e-10 68.2 113 38.1
Gohir.A05G280800 Gossypium hirsutum HOM05D004414 ORTHO05D001824 8.9e-10 67.8 113 38.1
Gorai.009G296300 Gossypium raimondii HOM05D004414 ORTHO05D001824 8.9e-10 67.8 113 38.1
Dinv09256 Davidia involucrata HOM05D004414 ORTHO05D001824 1.2e-09 67.4 150 34.7
CsaV3_5G036640 Cucumis sativus L. HOM05D004414 ORTHO05D001824 2.6e-09 66.2 134 37.3
Cc00_g03090 Coffea canephora HOM05D004414 ORTHO05D001824 5.8e-09 65.1 127 36.2
Duzib128G0092 Durio zibethinus HOM05D004414 ORTHO05D001824 5.8e-09 65.1 103 37.9
ClCG05G026710 Citrullus lanatus HOM05D004414 ORTHO05D001824 7.5e-09 64.7 91 44.0
TWI15G1156 Tripterygium wilfordii HOM05D004414 ORTHO05D001824 9.8e-09 64.3 82 45.1
GSVIVG01000669001 Vitis vinifera HOM05D004414 ORTHO05D001824 9.8e-09 64.3 129 36.4
Ciclev10004446m.g Citrus clementina HOM05D004414 ORTHO05D001824 1.3e-08 63.9 141 34.0
MD07G1036600 Malus domestica HOM05D004414 ORTHO05D001824 1.3e-08 63.9 78 44.9
CAN.G179.18 Capsicum annuum HOM05D004414 ORTHO05D001824 2.9e-08 62.8 78 43.6
Cc11_g01940 Coffea canephora HOM05D004414 ORTHO05D001824 3.7e-08 62.4 118 37.3
Hma1.2p1_1251F.1_g270410 Hydrangea macrophylla HOM05D004414 ORTHO05D001824 3.7e-08 62.4 109 38.5
Potri.001G025100 Populus trichocarpa HOM05D004414 ORTHO05D001824 4.9e-08 62.0 104 38.5
Haze_03067 Corylus avellana HOM05D004414 ORTHO05D001824 6.4e-08 61.6 78 43.6
CANSAT56G3557 Cannabis sativa HOM05D004414 ORTHO05D001824 1.1e-07 60.8 94 41.5
Migut.B01215 Erythranthe guttata HOM05D004414 ORTHO05D001824 1.1e-07 60.8 78 43.6
Sed0007735 Sechium edule HOM05D004414 ORTHO05D001824 1.1e-07 60.8 81 48.1
Manes.04G165400 Manihot esculenta HOM05D004414 ORTHO05D001824 1.9e-07 60.1 144 35.4
Nitab4.5_0002103g0040 Nicotiana tabacum HOM05D004414 ORTHO05D001824 1.9e-07 60.1 78 42.3
TWI63G0867 Tripterygium wilfordii HOM05D004414 ORTHO05D001824 2.4e-07 59.7 82 43.9
MD02G1290900 Malus domestica HOM05D004414 ORTHO05D001824 3.2e-07 59.3 86 40.7
TAR369G0352 Trochodendron aralioides HOM05D004414 ORTHO05D001824 3.2e-07 59.3 87 41.4
CiPaw.14G006500 Carya illinoinensis HOM05D004414 ORTHO05D001824 4.1e-07 58.9 119 36.1
Peaxi162Scf00309g00418 Petunia axillaris HOM05D004414 ORTHO05D001824 4.1e-07 58.9 76 40.8
QL04p014278 Quercus lobata HOM05D004414 ORTHO05D001824 4.1e-07 58.9 104 40.4
Atru.chr12.1399 Acer truncatum HOM05D004414 ORTHO05D001824 5.4e-07 58.5 71 50.7
arahy.Tifrunner.gnm1.ann1.19HB3K Arachis hypogaea HOM05D004414 ORTHO05D001824 7.1e-07 58.2 85 45.9
Sopen01g030520 Solanum pennellii HOM05D004414 ORTHO05D001824 7.1e-07 58.2 81 39.5
Prupe.2G032000 Prunus persica HOM05D004414 ORTHO05D001824 1.6e-06 57.0 141 29.1
CSS0028207 Camellia sinensis var. sinensis HOM05D004414 ORTHO05D001824 2.1e-06 56.6 81 39.5
SGA_v2.0_scaffold124G33637 Striga asiatica HOM05D004414 ORTHO05D001824 2.1e-06 56.6 77 40.3
arahy.Tifrunner.gnm1.ann1.XZ22FX Arachis hypogaea HOM05D004414 ORTHO05D001824 2.7e-06 56.2 67 49.3
Lalb_Chr01g0007921 Lupinus albus HOM05D004414 ORTHO05D001824 2.7e-06 56.2 127 32.3
TPR.G9876 Trifolium pratense HOM05D004414 ORTHO05D001824 4.6e-06 55.5 121 36.4


User provided reference genes

Program Settings