Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p27990 Brassica napus HOM05D006890 ORTHO05D009907 2.0e-77 292.4 146 100.0
BcaC05g25944 Brassica carinata HOM05D006890 ORTHO05D009907 5.4e-75 284.3 146 97.3
C05p18960 Brassica napus HOM05D006890 ORTHO05D009907 5.4e-75 284.3 146 97.3
BcaC05g27371 Brassica carinata HOM05D006890 ORTHO05D009907 9.2e-75 283.5 144 97.2
BcaC03g16943 Brassica carinata HOM05D006890 ORTHO05D009907 4.6e-74 281.2 146 95.9
BcaC04g20415 Brassica carinata HOM05D006890 ORTHO05D009907 1.4e-67 259.6 146 89.0
BcaC02g11614 Brassica carinata HOM05D006890 ORTHO05D009907 1.2e-66 256.5 146 87.0
A04p08270 Brassica napus HOM05D006890 ORTHO05D009907 6.0e-66 254.2 146 87.0
C03p65080 Brassica napus HOM05D006890 ORTHO05D009907 6.0e-66 254.2 146 87.0
BolC2t10877H Brassica oleracea HOM05D006890 ORTHO05D009907 3.9e-65 251.5 135 93.3
BcaC06g36006 Brassica carinata HOM05D006890 ORTHO05D009907 6.2e-63 244.2 146 86.3
A05p28530 Brassica napus HOM05D006890 ORTHO05D009907 8.1e-63 243.8 146 84.2
BcaC03g16877 Brassica carinata HOM05D006890 ORTHO05D009907 8.4e-60 233.8 146 82.9
C09p53260 Brassica napus HOM05D006890 ORTHO05D009907 2.7e-58 228.8 142 82.4
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 7.1e-51 204.1 150 70.7
BolC2t06969H Brassica oleracea HOM05D006890 ORTHO05D009907 4.6e-50 201.4 123 84.6
C01p27980 Brassica napus HOM05D006890 ORTHO05D009907 3.0e-49 198.7 145 73.8
C07p03240 Brassica napus HOM05D006890 ORTHO05D009907 7.9e-42 174.1 146 66.4
BcaB07g33924 Brassica carinata HOM05D006890 ORTHO05D009907 2.8e-39 165.6 158 56.3
BcaC03g13688 Brassica carinata HOM05D006890 ORTHO05D009907 1.7e-36 156.4 86 90.7
BraA06t26265Z Brassica rapa HOM05D006890 ORTHO05D009907 1.6e-34 149.8 146 58.2
C07p09090 Brassica napus HOM05D006890 ORTHO05D009907 2.7e-34 149.1 162 56.2
BcaC01g00112 Brassica carinata HOM05D006890 ORTHO05D009907 4.6e-34 148.3 146 58.2
C04p13170 Brassica napus HOM05D006890 ORTHO05D009907 1.4e-33 146.7 146 56.8
BolC5t34659H Brassica oleracea HOM05D006890 ORTHO05D009907 2.2e-31 139.4 146 57.5
BcaB01g00357 Brassica carinata HOM05D006890 ORTHO05D009907 1.2e-29 133.7 146 50.7
C02p48470 Brassica napus HOM05D006890 ORTHO05D009907 9.4e-27 124.0 122 58.2
BolC6t38084H Brassica oleracea HOM05D006890 ORTHO05D009907 9.4e-27 124.0 122 58.2
BcaC06g36530 Brassica carinata HOM05D006890 ORTHO05D009907 2.7e-26 122.5 122 58.2
C06p29210 Brassica napus HOM05D006890 ORTHO05D009907 2.7e-26 122.5 122 57.4
BcaB01g01117 Brassica carinata HOM05D006890 ORTHO05D009907 3.6e-26 122.1 146 49.3
BcaC08g45318 Brassica carinata HOM05D006890 ORTHO05D009907 1.0e-25 120.6 120 57.5
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 1.4e-25 120.2 122 55.7
BolC8t46862H Brassica oleracea HOM05D006890 ORTHO05D009907 6.7e-25 117.9 62 93.5
BolC9t57896H Brassica oleracea HOM05D006890 ORTHO05D009907 2.8e-23 112.5 58 96.6
C07p04060 Brassica napus HOM05D006890 ORTHO05D009907 4.8e-23 111.7 122 54.9
C09p50410 Brassica napus HOM05D006890 ORTHO05D009907 4.8e-23 111.7 58 94.8
BolC1t02732H Brassica oleracea HOM05D006890 ORTHO05D024497 8.2e-23 110.9 62 88.7
C06p34230 Brassica napus HOM05D006890 ORTHO05D040102 1.8e-22 109.8 123 54.5
Aa31sc129G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.6e-18 96.7 129 41.9
C09p43780 Brassica napus HOM05D006890 ORTHO05D009907 1.6e-18 96.7 58 84.5
BolC9t57262H Brassica oleracea HOM05D006890 ORTHO05D009907 1.6e-18 96.7 58 84.5
Aa31LG5G22030 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.7e-18 95.9 138 39.9
Aa31sc144G70 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.7e-18 95.9 133 39.8
Aa31sc510G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.7e-18 95.9 138 39.9
BcaNung05402 Brassica carinata HOM05D006890 ORTHO05D009907 6.1e-18 94.7 107 50.5
Aa31LG1G10500 Aethionema arabicum HOM05D000975 ORTHO05D000395 1.0e-17 94.0 109 45.9
BcaC04g19718 Brassica carinata HOM05D006890 ORTHO05D009907 1.4e-17 93.6 56 85.7
Aa31LG9G6060 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.8e-17 93.2 129 39.5
Aa31sc214G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.0e-17 92.4 138 39.1
BcaB06g28181 Brassica carinata HOM05D006890 ORTHO05D009907 5.2e-17 91.7 146 39.0
C03p32950 Brassica napus HOM05D006890 ORTHO05D009907 6.7e-17 91.3 48 89.6
Aa31LG4G11980 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.1e-16 90.5 125 42.4
Aa31sc296G50 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.5e-16 90.1 131 40.5
Aa31sc12G230 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.0e-16 89.7 106 45.3
Aa31sc214G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 4.4e-16 88.6 147 38.1
Aa31sc172G60 Aethionema arabicum HOM05D003348 ORTHO05D000395 8.2e-15 84.3 147 37.4
Aa31LG7G11520 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.8e-14 83.2 123 35.8
Aa31sc507G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.4e-14 82.8 138 37.0
A09p31720 Brassica napus HOM05D000975 ORTHO05D000395 9.1e-14 80.9 125 38.4
A02p04470 Brassica napus HOM05D006890 ORTHO05D009907 1.6e-13 80.1 42 88.1
A04p00780 Brassica napus HOM05D006890 ORTHO05D009907 1.6e-13 80.1 42 88.1
Aa31sc85G90 Aethionema arabicum HOM05D000003 ORTHO05D000006 2.6e-13 79.3 124 37.9
Carub.0001s3404 Capsella rubella HOM05D003348 ORTHO05D000395 2.6e-13 79.3 127 38.6
A03p57800 Brassica napus HOM05D000975 ORTHO05D000395 4.5e-13 78.6 125 37.6
C02p45170 Brassica napus HOM05D000975 ORTHO05D000395 5.9e-13 78.2 125 38.4
C09p13200 Brassica napus HOM05D000975 ORTHO05D000395 5.9e-13 78.2 125 37.6
C02p51070 Brassica napus HOM05D000975 ORTHO05D000395 7.7e-13 77.8 125 37.6
BraA09t38304Z Brassica rapa HOM05D000975 ORTHO05D000395 7.7e-13 77.8 125 37.6
Aa31sc475G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.0e-12 77.4 132 37.1
A01p33200 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-12 77.4 125 37.6
A03p63730 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-12 77.4 125 37.6
A03p64300 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-12 77.4 125 37.6
A05p31260 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-12 77.4 125 37.6
A06p23370 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-12 77.4 125 37.6
A09p29820 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-12 77.4 125 37.6
C07p07350 Brassica napus HOM05D000975 ORTHO05D000395 1.0e-12 77.4 125 37.6
BraA09t38545Z Brassica rapa HOM05D000975 ORTHO05D000395 1.0e-12 77.4 125 37.6
C02p32270 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-12 77.0 121 38.0
C06p29670 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-12 77.0 125 37.6
C07p32030 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-12 77.0 125 37.6
C09p26450 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-12 77.0 125 37.6
A09p24170 Brassica napus HOM05D000975 ORTHO05D000395 1.7e-12 76.6 125 37.6
C05p33150 Brassica napus HOM05D000975 ORTHO05D000395 1.7e-12 76.6 125 37.6
C08p14250 Brassica napus HOM05D000975 ORTHO05D000395 1.7e-12 76.6 125 36.8
A06p32990 Brassica napus HOM05D000975 ORTHO05D000395 2.2e-12 76.3 125 37.6
A04p00790 Brassica napus HOM05D003348 ORTHO05D011028 2.9e-12 75.9 131 36.6
A09p49020 Brassica napus HOM05D003348 ORTHO05D011028 2.9e-12 75.9 131 36.6
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 2.9e-12 75.9 131 36.6
C07p11500 Brassica napus HOM05D000975 ORTHO05D000395 2.9e-12 75.9 125 36.8
C07p41030 Brassica napus HOM05D003348 ORTHO05D011028 2.9e-12 75.9 131 36.6
C02p44860 Brassica napus HOM05D000975 ORTHO05D000395 3.8e-12 75.5 125 36.8
A06p20320 Brassica napus HOM05D000975 ORTHO05D000395 5.0e-12 75.1 125 36.8
A03p68230 Brassica napus HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 36.8
A06p27620 Brassica napus HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 36.8
A07p22620 Brassica napus HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 36.8
A10p04890 Brassica napus HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 36.8
C01p40930 Brassica napus HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 37.6
C04p20980 Brassica napus HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 37.6
C09p28680 Brassica napus HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 36.8
BraA01t03457Z Brassica rapa HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 36.8
BraA02t08986Z Brassica rapa HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 36.8
BraA06t23870Z Brassica rapa HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 36.8
BraA09t37384Z Brassica rapa HOM05D000975 ORTHO05D000395 6.5e-12 74.7 125 36.8
A09p40890 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-11 73.6 124 37.1
C09p43980 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-11 73.6 125 36.0
BolC6t38698H Brassica oleracea HOM05D000977 ORTHO05D001094 1.9e-11 73.2 117 35.9
AT5G35050 Arabidopsis thaliana HOM05D000975 ORTHO05D000395 2.5e-11 72.8 136 33.1
A01p14500 Brassica napus HOM05D000975 ORTHO05D000395 3.2e-11 72.4 125 36.0
A09p29870 Brassica napus HOM05D000975 ORTHO05D000395 3.2e-11 72.4 125 36.0
A03p49050 Brassica napus HOM05D003348 ORTHO05D011028 4.2e-11 72.0 106 38.7
C02p09980 Brassica napus HOM05D000975 ORTHO05D000395 4.2e-11 72.0 105 40.0
A02p27510 Brassica napus HOM05D000975 ORTHO05D000395 5.5e-11 71.6 125 36.0
C07p26090 Brassica napus HOM05D000975 ORTHO05D000395 9.4e-11 70.9 125 36.0
Aa31sc360G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.6e-10 70.1 122 36.1
C01p34250 Brassica napus HOM05D000975 ORTHO05D000395 1.6e-10 70.1 121 36.4
BolC1t03394H Brassica oleracea HOM05D000975 ORTHO05D000395 1.6e-10 70.1 121 36.4
Carub.0006s2603 Capsella rubella HOM05D000975 ORTHO05D000395 2.1e-10 69.7 118 35.6
C08p13080 Brassica napus HOM05D006890 ORTHO05D042011 4.7e-10 68.6 101 40.6
BraA03t15343Z Brassica rapa HOM05D000975 ORTHO05D000395 8.0e-10 67.8 106 37.7
BraA03t15445Z Brassica rapa HOM05D000975 ORTHO05D000395 8.0e-10 67.8 106 37.7
BraA08t32983Z Brassica rapa HOM05D000975 ORTHO05D000395 8.0e-10 67.8 106 37.7
Carub.0027s0001 Capsella rubella HOM05D000975 ORTHO05D000395 1.0e-09 67.4 118 34.7
BolC8t48937H Brassica oleracea HOM05D006890 ORTHO05D042011 1.4e-09 67.0 101 35.6
C03p71540 Brassica napus HOM05D003348 ORTHO05D011028 1.8e-09 66.6 131 35.1
C06p29660 Brassica napus HOM05D000975 ORTHO05D000395 1.8e-09 66.6 110 36.4
BraA06t26230Z Brassica rapa HOM05D000975 ORTHO05D000395 1.8e-09 66.6 106 37.7
C02p32300 Brassica napus HOM05D000975 ORTHO05D000395 2.3e-09 66.2 110 34.5
C04p57180 Brassica napus HOM05D000975 ORTHO05D000395 2.3e-09 66.2 106 37.7
Aa31LG6G9510 Aethionema arabicum HOM05D003348 ORTHO05D000395 6.7e-09 64.7 94 38.3
C04p20990 Brassica napus HOM05D000975 ORTHO05D000395 8.8e-09 64.3 110 33.6
A02p27520 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-08 63.9 110 34.5
A09p24140 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-08 63.9 110 35.5
C01p09510 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-08 63.9 110 34.5
C09p13210 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-08 63.9 110 34.5
C09p26430 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-08 63.9 110 34.5
BolC5t33488H Brassica oleracea HOM05D000975 ORTHO05D000395 1.2e-08 63.9 110 34.5
BcaC09g49808 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-08 63.5 124 32.3
A01p28030 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-08 63.5 110 34.5
A03p57780 Brassica napus HOM05D000975 ORTHO05D000395 2.0e-08 63.2 110 35.5
C08p14280 Brassica napus HOM05D000975 ORTHO05D000395 2.0e-08 63.2 110 34.5
C07p32050 Brassica napus HOM05D000975 ORTHO05D000395 2.6e-08 62.8 110 33.6
A01p33220 Brassica napus HOM05D000975 ORTHO05D000395 3.3e-08 62.4 110 35.5
BolC1t04278H Brassica oleracea HOM05D000977 ORTHO05D001094 3.3e-08 62.4 124 32.3
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 4.4e-08 62.0 124 32.3
A03p68250 Brassica napus HOM05D000975 ORTHO05D000395 4.4e-08 62.0 110 34.5
C03p75420 Brassica napus HOM05D000975 ORTHO05D000395 5.7e-08 61.6 110 33.6
C07p07380 Brassica napus HOM05D000975 ORTHO05D000395 5.7e-08 61.6 110 33.6
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 7.5e-08 61.2 139 31.7
C09p43960 Brassica napus HOM05D000975 ORTHO05D000395 9.7e-08 60.8 110 33.6
AL8G14210 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 1.3e-07 60.5 122 34.4
BcaC09g51271 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-07 60.5 139 31.7
A06p23390 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-07 60.5 110 33.6
A09p29840 Brassica napus HOM05D000975 ORTHO05D000395 1.3e-07 60.5 110 34.5
CARHR179050 Cardamine hirsuta HOM05D000975 ORTHO05D000395 1.3e-07 60.5 103 35.9
A03p63720 Brassica napus HOM05D000975 ORTHO05D000395 2.2e-07 59.7 110 34.5
A06p21930 Brassica napus HOM05D000975 ORTHO05D000395 2.2e-07 59.7 110 34.5
BraA05t21731Z Brassica rapa HOM05D003348 ORTHO05D011028 2.2e-07 59.7 131 32.8
CARHR263280 Cardamine hirsuta HOM05D000975 ORTHO05D000395 2.2e-07 59.7 70 45.7
C02p09990 Brassica napus HOM05D000975 ORTHO05D000395 2.8e-07 59.3 110 32.7
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 2.8e-07 59.3 131 32.8
BcaC07g37297 Brassica carinata HOM05D000977 ORTHO05D001094 3.7e-07 58.9 124 31.5
BcaB06g29622 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-07 58.5 141 29.1
BcaC05g27350 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-07 58.2 139 30.9
THA.LOC104815450 Tarenaya hassleriana HOM05D000675 ORTHO05D000395 6.3e-07 58.2 91 38.5
C05p35130 Brassica napus HOM05D000975 ORTHO05D000395 1.4e-06 57.0 89 36.0
AT1G31150 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 3.1e-06 55.8 103 37.9
BolC3t21038H Brassica oleracea HOM05D000975 ORTHO05D000395 3.1e-06 55.8 111 31.5
BolC7t42810H Brassica oleracea HOM05D000975 ORTHO05D000395 3.1e-06 55.8 89 34.8
Carub.0001s2955 Capsella rubella HOM05D000675 ORTHO05D000395 3.1e-06 55.8 105 37.1
A06p33000 Brassica napus HOM05D000975 ORTHO05D003128 4.1e-06 55.5 67 41.8
BolC7t41598H Brassica oleracea HOM05D000975 ORTHO05D000395 4.1e-06 55.5 89 34.8
C02p45200 Brassica napus HOM05D000975 ORTHO05D000395 5.3e-06 55.1 67 40.3
C05p33120 Brassica napus HOM05D000975 ORTHO05D000395 5.3e-06 55.1 67 40.3
BolC2t08855H Brassica oleracea HOM05D000975 ORTHO05D000395 5.3e-06 55.1 110 33.6
BolC9t55545H Brassica oleracea HOM05D000975 ORTHO05D000395 5.3e-06 55.1 67 40.3
AT3G29455 Arabidopsis thaliana HOM05D000975 ORTHO05D000395 7.0e-06 54.7 105 33.3
A03p63370 Brassica napus HOM05D000975 ORTHO05D000395 9.1e-06 54.3 67 41.8
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 9.1e-06 54.3 45 55.6
C07p21350 Brassica napus HOM05D000975 ORTHO05D000395 9.1e-06 54.3 89 34.8


User provided reference genes

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