Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11375 Brassica carinata HOM05D009362 ORTHO05D012051 6.9e-215 750.4 375 100.0
C04p16460 Brassica napus HOM05D009362 ORTHO05D012051 6.9e-215 750.4 375 100.0
BolC4t23196H Brassica oleracea HOM05D009362 ORTHO05D012051 1.4e-170 603.2 397 80.9
BraA05t20196Z Brassica rapa HOM05D009362 ORTHO05D012051 3.1e-167 592.0 388 80.9
BcaC02g11372 Brassica carinata HOM05D009362 ORTHO05D012051 2.6e-137 492.7 374 71.9
A05p12590 Brassica napus HOM05D009362 ORTHO05D012051 3.9e-133 478.8 608 49.8
BolC4t23197H Brassica oleracea HOM05D009362 ORTHO05D012051 2.3e-130 469.5 394 67.5
BcaC02g11371 Brassica carinata HOM05D009362 ORTHO05D012051 1.6e-126 456.8 404 65.6
C04p16480 Brassica napus HOM05D009362 ORTHO05D012051 1.6e-126 456.8 404 65.6
A05p12600 Brassica napus HOM05D009362 ORTHO05D012051 1.5e-108 397.1 392 60.2
BraA05t20197Z Brassica rapa HOM05D009362 ORTHO05D012051 5.1e-101 372.1 396 55.8
BcaB02g10519 Brassica carinata HOM05D009362 ORTHO05D012051 1.1e-100 370.9 421 52.5
BcaB02g10518 Brassica carinata HOM05D009362 ORTHO05D016011 1.5e-57 227.6 578 33.7
Sp4g15370 Schrenkiella parvula HOM05D009362 ORTHO05D012051 5.5e-55 219.2 578 35.3
BraA05t20199Z Brassica rapa HOM05D009362 ORTHO05D012051 1.8e-45 187.6 138 75.4
Thhalv10017579m.g Eutrema salsugineum HOM05D009362 ORTHO05D012051 6.7e-45 185.7 495 33.5
Carub.0004s1445 Capsella rubella HOM05D009362 ORTHO05D012051 4.4e-44 183.0 482 33.8
AL4G28550 Arabidopsis lyrata HOM05D009362 ORTHO05D012051 2.4e-42 177.2 526 32.1
AT2G33000 Arabidopsis thaliana HOM05D009362 ORTHO05D012051 7.2e-39 165.6 493 31.0
A05p12620 Brassica napus HOM05D014511 ORTHO05D016011 8.0e-30 135.6 394 30.5
AL120U10012 Arabidopsis lyrata HOM05D009362 ORTHO05D012051 1.8e-29 134.4 261 36.8
BraA05t20200Z Brassica rapa HOM05D014511 ORTHO05D016011 2.6e-28 130.6 373 31.9
BolC4t23199H Brassica oleracea HOM05D014511 ORTHO05D016011 4.9e-27 126.3 419 30.5
BcaB02g10516 Brassica carinata HOM05D014511 ORTHO05D016011 6.3e-27 125.9 553 25.9
C04p16510 Brassica napus HOM05D014511 ORTHO05D016011 1.1e-26 125.2 397 30.5
AL4G28580 Arabidopsis lyrata HOM05D009362 ORTHO05D031387 2.5e-23 114.0 384 31.8
BcaNung00813 Brassica carinata HOM05D009362 ORTHO05D012051 4.2e-23 113.2 110 62.7
C02p58020 Brassica napus HOM05D009362 ORTHO05D012051 4.7e-22 109.8 110 63.6
BolC5t33668H Brassica oleracea HOM05D009362 ORTHO05D012051 1.2e-20 105.1 113 61.9
BcaC02g11368 Brassica carinata HOM05D014511 ORTHO05D016011 2.9e-19 100.5 353 28.9
BcaC02g11367 Brassica carinata HOM05D014511 ORTHO05D016011 3.7e-19 100.1 126 46.0
BcaC03g15844 Brassica carinata HOM05D009362 ORTHO05D012051 4.1e-18 96.7 118 49.2
Thhalv10017728m.g Eutrema salsugineum HOM05D014511 ORTHO05D016011 1.3e-16 91.7 412 26.7
Carub.0004s1449 Capsella rubella HOM05D009362 ORTHO05D031387 5.0e-16 89.7 371 27.5
BcaC03g16119 Brassica carinata HOM05D009362 ORTHO05D012051 2.1e-14 84.3 101 54.5
AT2G33010 Arabidopsis thaliana HOM05D009362 ORTHO05D031387 1.4e-13 81.6 219 36.1
BraA10t44484Z Brassica rapa HOM05D021032 ORTHO05D013767 5.8e-12 76.3 95 46.3
BolC2t11870H Brassica oleracea HOM05D009362 ORTHO05D012051 4.6e-09 66.6 87 59.8
A04p02680 Brassica napus HOM05D009812 ORTHO05D101740 2.5e-07 60.8 36 83.3
C09p14390 Brassica napus HOM05D009812 ORTHO05D099949 2.5e-07 60.8 36 83.3
BraA05t20172Z Brassica rapa HOM05D009812 ORTHO05D108045 2.5e-07 60.8 36 83.3
BraA09t36861Z Brassica rapa HOM05D009812 ORTHO05D033566 2.5e-07 60.8 36 83.3
BraA10t42599Z Brassica rapa HOM05D009812 ORTHO05D016073 2.5e-07 60.8 36 83.3
A06p31520 Brassica napus HOM05D009812 ORTHO05D101484 7.3e-07 59.3 36 80.6
C01p10790 Brassica napus HOM05D001874 ORTHO05D013767 7.3e-07 59.3 108 39.8
BolC1t01039H Brassica oleracea HOM05D001874 ORTHO05D013767 7.3e-07 59.3 108 39.8
A01p20410 Brassica napus HOM05D009812 ORTHO05D041643 2.8e-06 57.4 36 80.6
C07p44020 Brassica napus HOM05D001874 ORTHO05D013767 2.8e-06 57.4 108 39.8
BraA01t01970Z Brassica rapa HOM05D009812 ORTHO05D041643 2.8e-06 57.4 36 80.6
BcaC07g39165 Brassica carinata HOM05D009812 ORTHO05D016073 3.6e-06 57.0 36 80.6
BcaC07g39166 Brassica carinata HOM05D009812 ORTHO05D016073 3.6e-06 57.0 36 80.6
C03p47160 Brassica napus HOM05D009812 ORTHO05D033566 3.6e-06 57.0 36 80.6
C04p16500 Brassica napus HOM05D014511 ORTHO05D016011 6.2e-06 56.2 102 39.2


User provided reference genes

Program Settings