Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p29020 Brassica napus HOM05D004425 ORTHO05D024261 8.5e-96 353.6 170 100.0
BolC3t15257H Brassica oleracea HOM05D004425 ORTHO05D024261 4.2e-95 351.3 170 99.4
BraA05t21374Z Brassica rapa HOM05D004425 ORTHO05D024261 5.6e-55 218.0 174 68.4
C03p88340 Brassica napus HOM05D004425 ORTHO05D005783 1.4e-53 213.4 182 67.0
BcaC03g15852 Brassica carinata HOM05D004425 ORTHO05D024261 1.1e-39 167.2 176 58.5
BcaC08g46598 Brassica carinata HOM05D004425 ORTHO05D005783 1.7e-32 143.3 215 46.0
AT1G71720 Arabidopsis thaliana HOM05D004425 ORTHO05D005783 4.0e-29 132.1 209 44.0
AL2G31290 Arabidopsis lyrata HOM05D004425 ORTHO05D005783 2.0e-28 129.8 218 43.6
A05p24870 Brassica napus HOM05D004425 ORTHO05D005783 2.0e-28 129.8 169 50.9
Carub.0002s1848 Capsella rubella HOM05D004425 ORTHO05D005783 2.6e-28 129.4 217 43.8
Thhalv10018428m.g Eutrema salsugineum HOM05D004425 ORTHO05D005783 4.4e-28 128.6 204 44.1
Sp5g26750 Schrenkiella parvula HOM05D004425 ORTHO05D005783 1.5e-23 113.6 227 40.1
A01p06600 Brassica napus HOM05D004425 ORTHO05D024261 2.5e-23 112.8 156 48.7
A07p37870 Brassica napus HOM05D004425 ORTHO05D005783 1.1e-21 107.5 129 52.7
C06p45770 Brassica napus HOM05D004425 ORTHO05D005783 1.1e-21 107.5 129 52.7
BraA07t31352Z Brassica rapa HOM05D004425 ORTHO05D005783 1.1e-21 107.5 129 52.7
BolC6t39629H Brassica oleracea HOM05D004425 ORTHO05D005783 4.0e-21 105.5 129 51.9
THA.LOC104810492 Tarenaya hassleriana HOM05D004425 ORTHO05D005783 8.9e-21 104.4 202 38.6
Aa31LG4G8910 Aethionema arabicum HOM05D004425 ORTHO05D005783 1.2e-20 104.0 131 50.4
Phvul.007G084200 Phaseolus vulgaris HOM05D004425 ORTHO05D005783 2.9e-19 99.4 146 42.5
AUR62007694 Chenopodium quinoa HOM05D004425 ORTHO05D005783 6.4e-19 98.2 223 35.0
FAN15G1954 Fragaria x ananassa HOM05D004425 ORTHO05D005783 6.4e-19 98.2 238 33.6
FAN20G2288 Fragaria x ananassa HOM05D004425 ORTHO05D005783 8.4e-19 97.8 238 33.2
CSS0010963 Camellia sinensis var. sinensis HOM05D004425 ORTHO05D005783 1.1e-18 97.4 129 45.0
CSS0011525 Camellia sinensis var. sinensis HOM05D004425 ORTHO05D005783 1.1e-18 97.4 129 45.0
AUR62007692 Chenopodium quinoa HOM05D004425 ORTHO05D005783 1.1e-18 97.4 223 35.0
Prupe.8G042900 Prunus persica HOM05D004425 ORTHO05D005783 1.1e-18 97.4 126 46.0
Actinidia17768 Actinidia chinensis HOM05D004425 ORTHO05D005783 2.4e-18 96.3 164 37.2
vmacro01503 Vaccinium macrocarpon HOM05D004425 ORTHO05D005783 4.2e-18 95.5 149 39.6
FAN27G1841 Fragaria x ananassa HOM05D004425 ORTHO05D005783 5.4e-18 95.1 238 33.2
PSO170G0918 Papaver somniferum HOM05D004425 ORTHO05D005783 7.1e-18 94.7 142 43.7
RcHm_v2.0_Chr6g0274001 Rosa chinensis HOM05D004425 ORTHO05D005783 7.1e-18 94.7 174 38.5
Sopen04g028080 Solanum pennellii HOM05D004425 ORTHO05D005783 7.1e-18 94.7 186 37.6
COL.COLO4_13726 Corchorus olitorius HOM05D004425 ORTHO05D005783 1.2e-17 94.0 118 48.3
Rhsim11G0088600 Rhododendron simsii HOM05D004425 ORTHO05D005783 1.2e-17 94.0 142 39.4
Duzib093G0931 Durio zibethinus HOM05D004425 ORTHO05D005783 1.6e-17 93.6 207 36.2
PGSC0003DMG400025077 Solanum tuberosum HOM05D004425 ORTHO05D005783 1.6e-17 93.6 185 36.8
Hma1.2p1_0678F.1_g202100 Hydrangea macrophylla HOM05D004425 ORTHO05D005783 2.1e-17 93.2 149 38.9
Solyc04g072036.1 Solanum lycopersicum HOM05D004425 ORTHO05D005783 2.1e-17 93.2 186 37.1
GSVIVG01013706001 Vitis vinifera HOM05D004425 ORTHO05D005783 2.1e-17 93.2 118 46.6
Aqoxy5G02018 Aquilegia oxysepala HOM05D004425 ORTHO05D005783 3.5e-17 92.4 128 44.5
AUR62013449 Chenopodium quinoa HOM05D004425 ORTHO05D005783 3.5e-17 92.4 130 45.4
Ciclev10000894m.g Citrus clementina HOM05D004425 ORTHO05D005783 3.5e-17 92.4 208 35.6
Nitab4.5_0003443g0070 Nicotiana tabacum HOM05D004425 ORTHO05D005783 3.5e-17 92.4 129 43.4
VMungo0720G3015 Vigna mungo HOM05D004425 ORTHO05D005783 3.5e-17 92.4 193 34.7
MSTRG.972 Avicennia marina HOM05D004425 ORTHO05D005783 4.6e-17 92.0 143 40.6
Haze_17811 Corylus avellana HOM05D004425 ORTHO05D005783 6.0e-17 91.7 127 44.1
DCAR_014325 Daucus carota HOM05D004425 ORTHO05D005783 6.0e-17 91.7 126 43.7
FvH4_2g12900 Fragaria vesca HOM05D004425 ORTHO05D005783 6.0e-17 91.7 125 44.0
FAN24G2283 Fragaria x ananassa HOM05D004425 ORTHO05D005783 6.0e-17 91.7 125 44.0
PSO210G1911 Papaver somniferum HOM05D004425 ORTHO05D005783 6.0e-17 91.7 142 42.3
SalBow7G3651 Salvia bowleyana HOM05D004425 ORTHO05D005783 7.8e-17 91.3 171 37.4
Hund17360 Selenicereus undatus HOM05D004425 ORTHO05D005783 7.8e-17 91.3 194 33.5
C01p29530 Brassica napus HOM05D004425 ORTHO05D042383 1.0e-16 90.9 129 48.8
BolC1t02895H Brassica oleracea HOM05D004425 ORTHO05D042383 1.0e-16 90.9 129 48.8
Gorai.005G076800 Gossypium raimondii HOM05D004425 ORTHO05D005783 1.0e-16 90.9 118 45.8
Thecc.08G161900 Theobroma cacao HOM05D004425 ORTHO05D005783 1.0e-16 90.9 141 42.6
CiPaw.15G011900 Carya illinoinensis HOM05D004425 ORTHO05D005783 1.3e-16 90.5 118 44.9
Cpa.g.sc26.112 Carica papaya HOM05D004425 ORTHO05D005783 1.7e-16 90.1 126 44.4
Migut.C00150 Erythranthe guttata HOM05D004425 ORTHO05D005783 1.7e-16 90.1 147 39.5
Gohir.D02G068000 Gossypium hirsutum HOM05D004425 ORTHO05D005783 1.7e-16 90.1 118 45.8
Manes.02G184000 Manihot esculenta HOM05D004425 ORTHO05D005783 1.7e-16 90.1 144 40.3
EL10Ac1g01372 Beta vulgaris HOM05D004425 ORTHO05D005783 2.3e-16 89.7 139 38.8
Gohir.A02G062300 Gossypium hirsutum HOM05D004425 ORTHO05D005783 2.3e-16 89.7 194 34.0
Peaxi162Scf00360g00089 Petunia axillaris HOM05D004425 ORTHO05D005783 2.3e-16 89.7 160 38.1
Nitab4.5_0003178g0010 Nicotiana tabacum HOM05D004425 ORTHO05D005783 3.0e-16 89.4 129 43.4
PGR102G1394 Punica granatum HOM05D004425 ORTHO05D005783 3.0e-16 89.4 118 45.8
MELO3C019971.2 Cucumis melo HOM05D004425 ORTHO05D005783 5.1e-16 88.6 118 43.2
TAR628G0201 Trochodendron aralioides HOM05D004425 ORTHO05D005783 5.1e-16 88.6 118 44.1
Cfa018276 Carpinus fangiana HOM05D004425 ORTHO05D005783 6.6e-16 88.2 118 44.9
Cc10_g06490 Coffea canephora HOM05D004425 ORTHO05D005783 6.6e-16 88.2 150 40.0
Glyma.10G220900 Glycine max HOM05D004425 ORTHO05D005783 6.6e-16 88.2 118 44.9
Medtr1g097610 Medicago truncatula HOM05D004425 ORTHO05D005783 6.6e-16 88.2 171 36.3
Atru.chr13.1991 Acer truncatum HOM05D004425 ORTHO05D005783 8.7e-16 87.8 198 34.8
CAN.G1183.17 Capsicum annuum HOM05D004425 ORTHO05D005783 8.7e-16 87.8 118 44.9
Migut.C00138 Erythranthe guttata HOM05D004425 ORTHO05D005783 8.7e-16 87.8 147 38.8
Lalb_Chr06g0161781 Lupinus albus HOM05D004425 ORTHO05D005783 8.7e-16 87.8 140 40.7
Sc26g0002880 Simmondsia chinensis HOM05D004425 ORTHO05D005783 8.7e-16 87.8 141 38.3
Nn6g32191 Nelumbo nucifera HOM05D004425 ORTHO05D005783 1.1e-15 87.4 118 43.2
MBI01_g29006_MAGBIO Magnolia biondii HOM05D004425 ORTHO05D005783 1.5e-15 87.0 186 33.9
CDE02G3532 Ceratophyllum demersum HOM05D004425 ORTHO05D005783 1.9e-15 86.7 118 43.2
Eucgr.F02682 Eucalyptus grandis HOM05D004425 ORTHO05D005783 1.9e-15 86.7 141 41.1
Sabra05G0150700 Salix brachista HOM05D004425 ORTHO05D005783 1.9e-15 86.7 119 43.7
Potri.005G197900 Populus trichocarpa HOM05D004425 ORTHO05D005783 2.5e-15 86.3 119 43.7
QL02p037179 Quercus lobata HOM05D004425 ORTHO05D005783 2.5e-15 86.3 159 35.8
arahy.Tifrunner.gnm1.ann1.64NVCN Arachis hypogaea HOM05D004425 ORTHO05D005783 3.3e-15 85.9 133 42.1
arahy.Tifrunner.gnm1.ann1.J67SBC Arachis hypogaea HOM05D004425 ORTHO05D005783 3.3e-15 85.9 133 42.1
Ca_10656_v3 Cicer arietinum L. HOM05D004425 ORTHO05D005783 4.3e-15 85.5 137 40.1
CsaV3_6G004950 Cucumis sativus L. HOM05D004425 ORTHO05D005783 4.3e-15 85.5 118 43.2
Sed0006049 Sechium edule HOM05D004425 ORTHO05D005783 4.3e-15 85.5 118 42.4
Glyma.20G170600 Glycine max HOM05D004425 ORTHO05D005783 5.6e-15 85.1 90 52.2
Phvul.004G089600 Phaseolus vulgaris HOM05D004425 ORTHO05D005783 5.6e-15 85.1 130 42.3
Sed0020223 Sechium edule HOM05D004425 ORTHO05D005783 7.3e-15 84.7 118 44.1
TWI60G0965 Tripterygium wilfordii HOM05D004425 ORTHO05D005783 7.3e-15 84.7 156 38.5
Oeu061448.2 Olea europaea HOM05D004425 ORTHO05D005783 9.6e-15 84.3 217 33.2
Psat6g190160 Pisum sativum HOM05D004425 ORTHO05D005783 1.3e-14 84.0 118 44.1
Ah.05g169010 Amaranthus hybridus HOM05D004425 ORTHO05D005783 2.1e-14 83.2 149 37.6
ClCG08G007280 Citrullus lanatus HOM05D004425 ORTHO05D005783 2.8e-14 82.8 146 39.0
DCAR_001192 Daucus carota HOM05D004425 ORTHO05D005783 2.8e-14 82.8 119 40.3
Lsat_1_v5_gn_9_42380 Lactuca sativa HOM05D004425 ORTHO05D005783 2.8e-14 82.8 132 40.2
Lj5g0021674 Lotus japonicus HOM05D004425 ORTHO05D005783 6.2e-14 81.6 118 42.4
TPR.G17013 Trifolium pratense HOM05D004425 ORTHO05D005783 6.2e-14 81.6 117 42.7
ECA232G4004 Erigeron canadensis HOM05D004425 ORTHO05D005783 8.1e-14 81.3 90 46.7
TWI60G0364 Tripterygium wilfordii HOM05D004425 ORTHO05D005783 8.1e-14 81.3 156 37.8
Lalb_Chr01g0009831 Lupinus albus HOM05D004425 ORTHO05D005783 1.1e-13 80.9 134 39.6
Potri.002G063400 Populus trichocarpa HOM05D004425 ORTHO05D005783 1.4e-13 80.5 135 37.0
HPP92_022923 Vanilla planifolia HOM05D004425 ORTHO05D005783 1.8e-13 80.1 90 48.9
HPP92_022945 Vanilla planifolia HOM05D004425 ORTHO05D005783 1.8e-13 80.1 90 48.9
Lalb_Chr19g0130031 Lupinus albus HOM05D004425 ORTHO05D005783 2.4e-13 79.7 127 40.2
HanXRQChr11g0320171 Helianthus annuus HOM05D004425 ORTHO05D005783 4.0e-13 79.0 118 39.8
SGA_v2.0_scaffold133G34677 Striga asiatica HOM05D004425 ORTHO05D005783 5.3e-13 78.6 127 40.9
VMungo0464G1137 Vigna mungo HOM05D004425 ORTHO05D005783 5.3e-13 78.6 132 39.4
Glyma.16G161600 Glycine max HOM05D004425 ORTHO05D005783 2.0e-12 76.6 131 39.7
Oeu046065.1 Olea europaea HOM05D004425 ORTHO05D005783 4.5e-12 75.5 149 35.6
MD05G1034600 Malus domestica HOM05D004425 ORTHO05D005783 1.7e-11 73.6 126 38.9
arahy.Tifrunner.gnm1.ann1.9T1T9I Arachis hypogaea HOM05D004425 ORTHO05D005783 4.9e-11 72.0 114 41.2
unitig_37.g13122 Utricularia gibba HOM05D004425 ORTHO05D005783 1.9e-10 70.1 89 49.4
arahy.Tifrunner.gnm1.ann1.GMAE2R Arachis hypogaea HOM05D004425 ORTHO05D005783 2.4e-10 69.7 114 40.4
Lj2g0007374 Lotus japonicus HOM05D004425 ORTHO05D005783 5.4e-10 68.6 146 33.6
BcaC01g01120 Brassica carinata HOM05D004425 ORTHO05D095244 2.7e-09 66.2 68 54.4
BcaC05g28762 Brassica carinata HOM05D004425 ORTHO05D005783 3.5e-09 65.9 36 88.9
ATR0006G031 Amborella trichopoda HOM05D004425 ORTHO05D005783 7.9e-09 64.7 164 34.8
Ca_04667_v3 Cicer arietinum L. HOM05D004425 ORTHO05D005783 1.0e-08 64.3 154 31.2
Lj7A385T59 Lonicera japonica HOM05D004425 ORTHO05D005783 2.5e-07 59.7 140 30.7
Os05g0535800 Oryza sativa ssp. japonica HOM05D004425 ORTHO05D005783 1.3e-06 57.4 128 33.6
Zm00001eb294080 Zea mays HOM05D004425 ORTHO05D005783 2.8e-06 56.2 140 32.1


User provided reference genes

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