Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 1.2e-173 613.2 356 100.0
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.7e-168 595.5 357 97.8
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 3.5e-168 595.1 357 97.5
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 2.2e-162 575.9 325 93.8
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 3.2e-153 545.4 324 91.4
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 6.0e-152 541.2 324 90.1
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 8.4e-122 441.0 335 75.5
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 6.7e-111 404.8 334 68.9
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 6.5e-106 388.3 330 68.5
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 4.7e-104 382.1 328 66.2
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 6.7e-103 378.3 259 79.2
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 6.5e-90 335.1 325 64.3
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.9e-73 280.4 325 52.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.1e-65 254.6 201 65.2
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.1e-65 254.6 257 59.1
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.9e-65 253.8 333 48.0
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 3.3e-65 253.1 205 64.9
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.2e-64 251.1 220 64.1
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 1.6e-64 250.8 181 71.3
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.1e-64 250.4 342 47.1
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 8.0e-64 248.4 229 59.8
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 2.3e-63 246.9 232 59.9
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 6.8e-63 245.4 188 67.6
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 8.9e-63 245.0 237 58.6
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 1.2e-62 244.6 252 57.1
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.5e-62 244.2 252 57.5
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.5e-62 244.2 229 59.0
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 4.4e-62 242.7 202 66.3
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 5.8e-62 242.3 208 62.0
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 7.5e-62 241.9 232 59.1
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.3e-61 241.1 228 59.6
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 2.2e-61 240.4 198 64.1
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 2.9e-61 240.0 228 57.9
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 4.9e-61 239.2 183 67.8
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 4.9e-61 239.2 260 54.6
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 4.9e-61 239.2 264 54.2
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 4.9e-61 239.2 244 56.1
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 6.4e-61 238.8 215 60.9
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 6.4e-61 238.8 200 63.5
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 6.4e-61 238.8 341 46.0
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 6.4e-61 238.8 218 59.2
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 8.3e-61 238.4 191 64.4
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 8.3e-61 238.4 233 58.4
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.4e-60 237.7 246 56.9
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 1.9e-60 237.3 179 66.5
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 4.1e-60 236.1 221 58.4
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.1e-60 236.1 218 58.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 7.0e-60 235.3 179 65.9
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.2e-60 235.0 218 57.8
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 9.2e-60 235.0 200 59.5
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.6e-59 234.2 248 55.2
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 2.0e-59 233.8 244 55.3
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.7e-59 233.4 199 61.3
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 2.7e-59 233.4 186 65.6
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 4.6e-59 232.6 245 55.9
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 6.0e-59 232.3 178 75.3
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.0e-59 232.3 210 58.1
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 6.0e-59 232.3 230 57.0
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.8e-59 231.9 218 57.3
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 7.8e-59 231.9 206 59.2
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.0e-58 231.5 186 65.6
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 1.0e-58 231.5 216 60.6
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.3e-58 231.1 276 50.7
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 2.3e-58 230.3 192 62.0
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.0e-58 229.9 279 51.3
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 3.0e-58 229.9 172 65.1
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 3.0e-58 229.9 182 62.6
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 3.0e-58 229.9 329 43.8
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.9e-58 229.6 180 65.0
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.9e-58 229.6 238 55.0
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 3.9e-58 229.6 323 46.4
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 8.6e-58 228.4 169 67.5
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.1e-57 228.0 276 50.0
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.5e-57 227.6 191 62.3
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.9e-57 227.3 191 62.3
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.9e-57 227.3 276 49.6
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 5.6e-57 225.7 187 63.1
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 5.6e-57 225.7 169 68.6
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.6e-57 225.7 218 56.4
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.2e-56 224.6 344 44.2
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.2e-56 224.6 176 63.1
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.1e-55 221.5 189 60.8
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.3e-53 214.5 206 55.3
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 2.9e-53 213.4 172 61.6
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 8.3e-53 211.8 188 60.1
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.1e-52 209.5 185 60.0
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 5.4e-52 209.1 194 59.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 2.1e-51 207.2 213 56.3
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 3.5e-51 206.5 174 60.3
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 4.6e-51 206.1 166 63.9
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.7e-50 204.1 173 59.0
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 5.1e-50 202.6 303 44.2
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 8.6e-50 201.8 173 58.4
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 3.3e-49 199.9 167 60.5
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 4.3e-49 199.5 224 50.4
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 3.6e-48 196.4 142 69.7
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 4.7e-48 196.1 208 52.9
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.5e-46 191.0 156 64.1
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.3e-45 188.0 171 53.2
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 7.8e-43 178.7 251 46.6
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.7e-42 177.6 180 55.6
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 5.6e-41 172.6 134 64.2
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.5e-33 147.9 166 45.2
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.5e-33 147.9 159 52.8
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.6e-32 144.4 152 55.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.9e-28 131.0 110 57.3
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.2e-28 129.8 115 63.5
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.4e-28 129.4 158 48.1
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.6e-27 127.9 98 63.3
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.6e-27 127.9 157 47.8
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 6.0e-27 125.9 102 60.8
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.8e-23 114.4 174 36.8
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 7.6e-22 109.0 251 34.3
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 3.5e-19 100.1 181 31.5
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 7.4e-17 92.4 61 75.4
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.5e-12 77.4 60 56.7
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 3.9e-10 70.1 55 67.3
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 7.4e-09 65.9 168 31.0
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.2e-06 58.5 55 50.9
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 2.0e-06 57.8 35 80.0


User provided reference genes

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