Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 1.1e-110 403.3 195 100.0
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 1.1e-110 403.3 195 100.0
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 7.7e-109 397.1 195 99.0
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 6.5e-100 367.5 195 92.8
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 6.5e-100 367.5 195 92.8
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 2.6e-93 345.5 195 87.7
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.6e-90 336.3 196 83.7
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 3.3e-88 328.6 178 87.6
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 4.4e-88 328.2 195 83.6
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 4.4e-88 328.2 195 83.6
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 7.5e-88 327.4 196 81.6
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.1e-86 323.6 184 84.2
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 2.4e-86 322.4 203 80.3
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 7.0e-86 320.9 203 80.3
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 3.5e-85 318.5 184 83.2
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 3.8e-84 315.1 189 80.4
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 6.5e-84 314.3 196 78.1
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 5.9e-77 291.2 180 77.8
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 6.6e-68 261.2 209 69.4
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 4.3e-67 258.5 181 69.6
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 5.6e-67 258.1 174 70.7
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 9.5e-67 257.3 176 69.3
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 9.5e-67 257.3 174 70.7
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 3.6e-66 255.4 189 66.7
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.4e-65 253.4 172 70.9
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 5.2e-65 251.5 183 66.1
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 8.9e-65 250.8 179 67.6
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 1.2e-64 250.4 183 66.7
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 1.5e-64 250.0 171 72.5
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 2.0e-64 249.6 177 68.4
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 4.4e-64 248.4 174 68.4
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 1.7e-63 246.5 174 70.1
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 2.9e-63 245.7 184 64.1
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 2.9e-63 245.7 174 68.4
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 3.7e-63 245.4 172 69.2
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 3.7e-63 245.4 176 68.8
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 3.7e-63 245.4 178 66.9
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 4.9e-63 245.0 185 67.0
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 6.4e-63 244.6 177 67.2
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 1.1e-62 243.8 178 68.0
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 1.1e-62 243.8 174 69.5
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 1.4e-62 243.4 158 72.2
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 1.8e-62 243.0 167 68.9
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 2.4e-62 242.7 154 74.0
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 5.4e-62 241.5 176 64.2
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 9.2e-62 240.7 170 66.5
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 9.2e-62 240.7 190 61.6
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.6e-61 240.0 156 71.8
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 2.0e-61 239.6 156 71.2
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 2.0e-61 239.6 156 71.2
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 2.0e-61 239.6 175 63.4
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 2.0e-61 239.6 174 66.7
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 2.7e-61 239.2 172 67.4
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 2.7e-61 239.2 167 67.1
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 3.5e-61 238.8 210 58.1
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 4.6e-61 238.4 185 61.6
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 5.9e-61 238.0 196 60.7
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 1.0e-60 237.3 180 62.8
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 1.3e-60 236.9 154 71.4
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 2.3e-60 236.1 157 68.2
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 2.3e-60 236.1 155 71.6
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 2.3e-60 236.1 179 63.1
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 3.0e-60 235.7 172 67.4
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 3.9e-60 235.3 183 63.9
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 3.9e-60 235.3 179 63.7
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 3.9e-60 235.3 163 68.7
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 5.0e-60 235.0 176 63.1
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.1e-59 233.8 181 63.0
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.1e-59 233.8 178 62.9
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 1.1e-59 233.8 154 67.5
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 1.9e-59 233.0 157 68.2
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 9.5e-59 230.7 156 66.7
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 9.5e-59 230.7 154 69.5
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.6e-58 229.9 179 62.0
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.6e-58 229.9 176 62.5
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 2.8e-58 229.2 157 66.9
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 3.6e-58 228.8 156 67.3
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 4.7e-58 228.4 174 63.8
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.8e-57 226.5 153 67.3
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 5.2e-57 224.9 180 59.4
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 2.9e-55 219.2 174 60.9
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 3.2e-54 215.7 183 61.7
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 5.4e-54 214.9 164 62.8
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 1.3e-52 210.3 240 48.8
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.9e-52 208.8 179 60.3
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 7.3e-51 204.5 137 68.6
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 9.5e-51 204.1 137 67.9
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 6.2e-50 201.4 141 68.8
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 1.1e-49 200.7 181 58.6
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 2.9e-47 192.6 154 60.4
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.1e-46 190.7 159 56.0
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 3.2e-46 189.1 186 54.3
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.7e-45 186.0 125 70.4
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.3e-44 183.7 131 67.9
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.3e-44 183.7 187 52.4
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.3e-44 183.7 158 58.2
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.7e-44 183.3 153 60.1
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 4.3e-43 178.7 132 65.9
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 5.2e-41 171.8 118 67.8
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 4.9e-39 165.2 152 57.2
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.7e-34 148.7 117 62.4
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 2.3e-28 129.8 80 78.8
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 3.0e-28 129.4 82 68.3
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 3.3e-19 99.4 149 37.6
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 5.3e-17 92.0 89 48.3
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 3.9e-12 75.9 85 50.6
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.9e-11 73.6 116 37.9
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 2.0e-08 63.5 45 62.2


User provided reference genes

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