Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 9.0e-41 169.9 88 100.0
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 2.8e-26 121.7 70 91.4
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 2.8e-26 121.7 70 91.4
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 8.2e-26 120.2 70 90.0
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 1.1e-25 119.8 70 90.0
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 1.1e-25 119.8 70 90.0
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 1.8e-25 119.0 62 100.0
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 1.2e-21 106.3 63 88.9
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 3.0e-20 101.7 70 74.3
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 3.0e-20 101.7 70 74.3
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 5.1e-20 100.9 66 78.8
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 1.1e-19 99.8 70 72.9
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 1.9e-19 99.0 70 74.3
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 2.8e-18 95.1 66 74.2
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 3.7e-18 94.7 70 65.7
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 1.4e-17 92.8 65 75.4
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 1.8e-17 92.4 70 67.1
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 1.8e-17 92.4 70 68.6
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 2.4e-17 92.0 70 68.6
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 6.9e-17 90.5 66 66.7
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 6.9e-17 90.5 70 64.3
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 9.0e-17 90.1 62 71.0
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 9.0e-17 90.1 70 65.7
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 1.2e-16 89.7 70 62.9
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 1.2e-16 89.7 65 67.7
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 1.2e-16 89.7 65 70.8
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 2.6e-16 88.6 67 64.2
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 2.6e-16 88.6 70 65.7
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 3.4e-16 88.2 66 65.2
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 3.4e-16 88.2 70 62.9
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 4.5e-16 87.8 70 64.3
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 4.5e-16 87.8 63 68.3
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 7.7e-16 87.0 70 62.9
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 7.7e-16 87.0 65 67.7
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 7.7e-16 87.0 66 63.6
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 7.7e-16 87.0 62 66.1
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 1.0e-15 86.7 70 64.3
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 1.3e-15 86.3 61 70.5
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 1.3e-15 86.3 62 67.7
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 1.3e-15 86.3 70 64.3
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 1.7e-15 85.9 70 62.9
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 2.2e-15 85.5 70 61.4
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 2.2e-15 85.5 66 62.1
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 2.2e-15 85.5 70 64.3
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 2.2e-15 85.5 70 62.9
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 2.2e-15 85.5 65 64.6
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 2.9e-15 85.1 65 64.6
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 2.9e-15 85.1 70 60.0
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 2.9e-15 85.1 70 62.9
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 3.8e-15 84.7 65 64.6
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 3.8e-15 84.7 66 62.1
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 3.8e-15 84.7 61 68.9
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 3.8e-15 84.7 70 60.0
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 3.8e-15 84.7 68 63.2
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 3.8e-15 84.7 70 62.9
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 3.8e-15 84.7 65 64.6
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 5.0e-15 84.3 67 59.7
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 6.5e-15 84.0 70 60.0
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 8.5e-15 83.6 65 67.7
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 8.5e-15 83.6 65 64.6
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 8.5e-15 83.6 61 67.2
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 8.5e-15 83.6 70 58.6
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 8.5e-15 83.6 67 59.7
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 1.1e-14 83.2 70 61.4
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 1.4e-14 82.8 70 57.1
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 1.4e-14 82.8 70 60.0
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 1.9e-14 82.4 48 87.5
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 1.9e-14 82.4 65 63.1
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 1.9e-14 82.4 67 58.2
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 2.5e-14 82.0 66 60.6
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 2.5e-14 82.0 65 63.1
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 3.2e-14 81.6 62 67.7
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 4.2e-14 81.3 70 57.1
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.2e-14 80.5 62 61.3
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 9.4e-14 80.1 65 61.5
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 1.6e-13 79.3 65 60.0
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 1.6e-13 79.3 70 57.1
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 1.6e-13 79.3 63 61.9
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 2.1e-13 79.0 66 59.1
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 2.7e-13 78.6 65 64.6
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 2.7e-13 78.6 66 57.6
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 3.6e-13 78.2 59 66.1
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 3.6e-13 78.2 70 55.7
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 4.6e-13 77.8 70 55.7
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 6.1e-13 77.4 70 55.7
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 1.8e-12 75.9 61 68.9
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 1.8e-12 75.9 70 54.3
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 3.9e-12 74.7 66 54.5
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 1.7e-10 69.3 61 55.7
BcaC03g17585 Brassica carinata HOM05D007648 ORTHO05D009613 2.8e-10 68.6 36 97.2
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 2.6e-08 62.0 61 54.1
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.3e-07 59.7 115 37.4
C02p55660 Brassica napus HOM05D000430 ORTHO05D021673 5.0e-07 57.8 35 85.7
BolC2t11621H Brassica oleracea HOM05D000874 ORTHO05D021673 5.0e-07 57.8 35 85.7
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 1.4e-06 56.2 66 45.5
A02p36670 Brassica napus HOM05D000874 ORTHO05D021673 2.5e-06 55.5 35 82.9
BraA02t08662Z Brassica rapa HOM05D000874 ORTHO05D021673 2.5e-06 55.5 35 82.9


User provided reference genes

Program Settings